RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 KIF5BP33176 963 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 IQCEQ6IPM2 695 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 TMC6Q7Z403 805 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 CPLX3Q8WVH0 158 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 C19orf44Q9H6X5 657 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 URI1O94763 535 aaPredicted RBP16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 TNNT1P13805 278 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 FKBP15Q5T1M5 1219 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 ZBTB43O43298 467 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 XRCC6P12956 609 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 AK2P54819 239 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 SLC9C2Q5TAH2 1124 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 GOLGA6L10A6NI86 522 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 DNM1Q05193 864 aaKnown RBP16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 RAB3GAP1Q15042 981 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 WTAPQ15007 396 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 TMEM266Q2M3C6 531 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 CCDC102BQ68D86 513 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 OTUD7AQ8TE49 926 aaPredicted RBP16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 USP26Q9BXU7 913 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 PTPRTO14522 1441 aa16.47■□□□□ 0.23
PCDHB16-201ENST00000609684 KAT14Q9H8E8 782 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 RRP9O43818 475 aaKnown RBP16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 NEMFO60524 1076 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 CAVIN2O95810 425 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 BAG3O95817 575 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 ACSBG1Q96GR2 724 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 DCAF5Q96JK2 942 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 IL2RBP14784 551 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 SPA17Q15506 151 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 NBPF6Q5VWK0 638 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 NBPF5PQ86XG9 351 aaPredicted RBP16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 NBPF4Q96M43 638 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 KIF5CO60282 957 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 CYP7A1P22680 504 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 GSDMDP57764 484 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 ALG1Q9BT22 464 aa16.46■□□□□ 0.23
PCDHB16-201ENST00000609684 FAM193AP78312 1265 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 WWC2Q6AWC2 1192 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 ATP6V1AP38606 617 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 TFCP2Q12800 502 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 RBM25P49756 843 aaKnown RBP16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 CREB3L3Q68CJ9 461 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 TSG101Q99816 390 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 SLC4A4Q9Y6R1 1079 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 BLMP54132 1417 aaPredicted RBP16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 PPP1R12BO60237 982 aaPredicted RBP16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 KIF4BQ2VIQ3 1234 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 TAF4BQ92750 862 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 CRNKL1Q9BZJ0 848 aaKnown RBP16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 KRT23Q9C075 422 aa16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 DDX21Q9NR30 783 aaKnown RBP eCLIP16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
PCDHB16-201ENST00000609684 CHL1O00533 1208 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 SPTY2D1Q68D10 685 aaPredicted RBP16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 CACNA2D4Q7Z3S7 1137 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 UBA5Q9GZZ9 404 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 DACT1Q9NYF0 836 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 CENPHQ9H3R5 247 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 SBNO1A3KN83 1393 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 SYKP43405 635 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 TMCO3Q6UWJ1 677 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 TSPYL1Q9H0U9 437 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 RFC4P35249 363 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 CCDC102AQ96A19 550 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 TCP11L1Q9NUJ3 509 aa16.44■□□□□ 0.22
PCDHB16-201ENST00000609684 CCDC12Q8WUD4 166 aaPredicted RBP16.43■□□□□ 0.22
PCDHB16-201ENST00000609684 STX8Q9UNK0 236 aa16.43■□□□□ 0.22
PCDHB16-201ENST00000609684 UBA7P41226 1012 aa16.43■□□□□ 0.22
PCDHB16-201ENST00000609684 PRC1O43663 620 aa16.43■□□□□ 0.22
PCDHB16-201ENST00000609684 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
PCDHB16-201ENST00000609684 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
PCDHB16-201ENST00000609684 CASQ1P31415 396 aa16.43■□□□□ 0.22
PCDHB16-201ENST00000609684 ANO6Q4KMQ2 910 aa16.43■□□□□ 0.22
PCDHB16-201ENST00000609684 KCNG4Q8TDN1 519 aa16.43■□□□□ 0.22
PCDHB16-201ENST00000609684 ESR2Q92731 530 aa16.43■□□□□ 0.22
PCDHB16-201ENST00000609684 CNNM2Q9H8M5 875 aa16.42■□□□□ 0.22
PCDHB16-201ENST00000609684 RNF113AO15541 343 aaKnown RBP16.42■□□□□ 0.22
PCDHB16-201ENST00000609684 IDEP14735 1019 aa16.42■□□□□ 0.22
PCDHB16-201ENST00000609684 RTN1Q16799 776 aa16.42■□□□□ 0.22
PCDHB16-201ENST00000609684 CHST3Q7LGC8 479 aa16.42■□□□□ 0.22
PCDHB16-201ENST00000609684 MRPS27Q92552 414 aaKnown RBP16.42■□□□□ 0.22
PCDHB16-201ENST00000609684 SIRT1Q96EB6 747 aa16.42■□□□□ 0.22
PCDHB16-201ENST00000609684 KANK3Q6NY19 840 aa16.42■□□□□ 0.22
PCDHB16-201ENST00000609684 DZIP3Q86Y13 1208 aaKnown RBP16.42■□□□□ 0.22
PCDHB16-201ENST00000609684 FAM200AQ8TCP9 573 aa16.42■□□□□ 0.22
PCDHB16-201ENST00000609684 TNIP1Q15025 636 aa16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 SPATA31E1Q6ZUB1 1445 aa16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 PRKCSHP14314 528 aaPredicted RBP16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 INTS4Q96HW7 963 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms