RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ANKRD13DQ6ZTN6 518 aa12.12□□□□□ -0.47
CTCFL-216ENST00000608263 EFCAB6Q5THR3 1501 aa12.12□□□□□ -0.47
CTCFL-216ENST00000608263 LRMPQ12912 555 aa12.12□□□□□ -0.47
CTCFL-216ENST00000608263 NCOA5Q9HCD5 579 aaKnown RBP12.12□□□□□ -0.47
CTCFL-216ENST00000608263 RBM5P52756 815 aaKnown RBP eCLIP12.12□□□□□ -0.47
CTCFL-216ENST00000608263 SSH3Q8TE77 659 aa12.12□□□□□ -0.47
CTCFL-216ENST00000608263 SUCLG2Q96I99 432 aa12.12□□□□□ -0.47
CTCFL-216ENST00000608263 RNF17Q9BXT8 1623 aaKnown RBP12.12□□□□□ -0.47
CTCFL-216ENST00000608263 PTCH1Q13635 1447 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 IL2RBP14784 551 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 TIMM10P62072 90 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 ATP2B2Q01814 1243 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 TFCP2Q12800 502 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 PROSER3Q2NL68 480 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 OTUD7BQ6GQQ9 843 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 PIBF1Q8WXW3 757 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 KIAA0232Q92628 1395 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 SLC27A2O14975 620 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 CFAP100Q494V2 611 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 OLFM4Q6UX06 510 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 AMOTL1Q8IY63 956 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 C8orf76Q96K31 380 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 PRIMPOLQ96LW4 560 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 SEC62Q99442 399 aaKnown RBP12.11□□□□□ -0.47
CTCFL-216ENST00000608263 TULP4Q9NRJ4 1543 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 AK9Q5TCS8 1911 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 TMEM94Q12767 1356 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 ATP6V1AP38606 617 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 METTL24Q5JXM2 366 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 LINS1Q8NG48 757 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 NUP133Q8WUM0 1156 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 EAF2Q96CJ1 260 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-216ENST00000608263 TRERF1Q96PN7 1200 aa12.11□□□□□ -0.47
CTCFL-216ENST00000608263 IBTKQ9P2D0 1353 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-216ENST00000608263 RIOK3O14730 519 aaKnown RBP12.1□□□□□ -0.47
CTCFL-216ENST00000608263 AK7Q96M32 723 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 NLRP1Q9C000 1473 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 SAFBQ15424 915 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTCFL-216ENST00000608263 SKIDA1Q1XH10 827 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 TMC6Q7Z403 805 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 TPCN1Q9ULQ1 816 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 MTMR6Q9Y217 621 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-216ENST00000608263 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 ZNF500O60304 480 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-216ENST00000608263 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
CTCFL-216ENST00000608263 TTC6Q86TZ1 520 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 DBNDD2Q9BQY9 259 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 IL25Q9H293 177 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 TTC41PQ6P2S7 1318 aa12.1□□□□□ -0.47
CTCFL-216ENST00000608263 IQSEC2Q5JU85 1478 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 GOLGA8BA8MQT2 603 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 SKILP12757 684 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 AOPEPQ8N6M6 819 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 OSBPL3Q9H4L5 887 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 ANO10Q9NW15 660 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 TLR7Q9NYK1 1049 aaKnown RBP12.09□□□□□ -0.47
CTCFL-216ENST00000608263 LRRC7Q96NW7 1537 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 MARCKSP29966 332 aaPredicted RBP12.09□□□□□ -0.47
CTCFL-216ENST00000608263 CCDC34Q96HJ3 373 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 RXRAP19793 462 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 SFPQP23246 707 aaKnown RBP eCLIP12.09□□□□□ -0.47
CTCFL-216ENST00000608263 U2AF2P26368 475 aaKnown RBP eCLIP12.09□□□□□ -0.47
CTCFL-216ENST00000608263 TNNT3P45378 269 aaPredicted RBP12.09□□□□□ -0.47
CTCFL-216ENST00000608263 CUL4AQ13619 759 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 ORC3Q9UBD5 711 aaPredicted RBP12.09□□□□□ -0.47
CTCFL-216ENST00000608263 USP16Q9Y5T5 823 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 LAMC1P11047 1609 aa12.09□□□□□ -0.47
CTCFL-216ENST00000608263 AKAP4Q5JQC9 854 aa12.08□□□□□ -0.47
CTCFL-216ENST00000608263 LSG1Q9H089 658 aaKnown RBP12.08□□□□□ -0.47
CTCFL-216ENST00000608263 CBX8Q9HC52 389 aa12.08□□□□□ -0.47
CTCFL-216ENST00000608263 PYCARDQ9ULZ3 195 aa12.08□□□□□ -0.47
CTCFL-216ENST00000608263 SNRPA1P09661 255 aaKnown RBP12.08□□□□□ -0.48
CTCFL-216ENST00000608263 IKQ13123 557 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-216ENST00000608263 CCDC24Q8N4L8 307 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 IQSEC3Q9UPP2 1182 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-216ENST00000608263 GLI2P10070 1586 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 DDIT3P35638 169 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 IMMTQ16891 758 aaKnown RBP12.08□□□□□ -0.48
CTCFL-216ENST00000608263 NRBP1Q9UHY1 535 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 SBNO1A3KN83 1393 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 QRICH2Q9H0J4 1663 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 PNPLA6Q8IY17 1366 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 A0A1B0GVL5 298 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 ALDH1L1O75891 902 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 URI1O94763 535 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-216ENST00000608263 LMOD1P29536 600 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-216ENST00000608263 RFC4P35249 363 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 CEP135Q66GS9 1140 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 KLHL10Q6JEL2 608 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 MICU3Q86XE3 530 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 IP6K1Q92551 441 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 ANKIB1Q9P2G1 1089 aa12.08□□□□□ -0.48
CTCFL-216ENST00000608263 IQGAP1P46940 1657 aa12.07□□□□□ -0.48
CTCFL-216ENST00000608263 ERICH2A1L162 156 aa12.07□□□□□ -0.48
CTCFL-216ENST00000608263 PLEKHG3A1L390 1219 aa12.07□□□□□ -0.48
CTCFL-216ENST00000608263 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
CTCFL-216ENST00000608263 IGHMBP2P38935 993 aaKnown RBP12.07□□□□□ -0.48
CTCFL-216ENST00000608263 ROBO2Q9HCK4 1378 aa12.07□□□□□ -0.48
CTCFL-216ENST00000608263 BEND3Q5T5X7 828 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms