RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 LINC00114Q6XXX2 140 aa9.61□□□□□ -0.87
SH3D19-213ENST00000604922 KRT25Q7Z3Z0 450 aa9.61□□□□□ -0.87
SH3D19-213ENST00000604922 USP20Q9Y2K6 914 aa9.61□□□□□ -0.87
SH3D19-213ENST00000604922 SASH3O75995 380 aa9.6□□□□□ -0.87
SH3D19-213ENST00000604922 EGFRP00533 1210 aa9.6□□□□□ -0.87
SH3D19-213ENST00000604922 HOXB4P17483 251 aaPredicted RBP9.6□□□□□ -0.87
SH3D19-213ENST00000604922 TARSP26639 723 aaKnown RBP9.6□□□□□ -0.87
SH3D19-213ENST00000604922 ZAP70P43403 619 aa9.6□□□□□ -0.87
SH3D19-213ENST00000604922 NOP53Q9NZM5 478 aaKnown RBP9.6□□□□□ -0.87
SH3D19-213ENST00000604922 CARNS1A5YM72 827 aa9.59□□□□□ -0.87
SH3D19-213ENST00000604922 MAP3K6O95382 1288 aa9.59□□□□□ -0.87
SH3D19-213ENST00000604922 HELQQ8TDG4 1101 aa9.59□□□□□ -0.87
SH3D19-213ENST00000604922 DNAJB12Q9NXW2 375 aaKnown RBP9.59□□□□□ -0.87
SH3D19-213ENST00000604922 FNDC3AQ9Y2H6 1198 aaKnown RBP9.59□□□□□ -0.87
SH3D19-213ENST00000604922 ALYREFQ86V81 257 aaKnown RBP9.58□□□□□ -0.88
SH3D19-213ENST00000604922 SLC6A14Q9UN76 642 aa9.58□□□□□ -0.88
SH3D19-213ENST00000604922 M0R082 166 aa9.57□□□□□ -0.88
SH3D19-213ENST00000604922 SCNN1AP37088 669 aa9.57□□□□□ -0.88
SH3D19-213ENST00000604922 FAM26DQ5JW98 314 aa9.57□□□□□ -0.88
SH3D19-213ENST00000604922 DHX32Q7L7V1 743 aaKnown RBP9.57□□□□□ -0.88
SH3D19-213ENST00000604922 ZNF417Q8TAU3 575 aa9.57□□□□□ -0.88
SH3D19-213ENST00000604922 GTF3C2Q8WUA4 911 aaPredicted RBP9.57□□□□□ -0.88
SH3D19-213ENST00000604922 ZNF587Q96SQ5 575 aaPredicted RBP9.57□□□□□ -0.88
SH3D19-213ENST00000604922 ZFATQ9P243 1243 aa9.57□□□□□ -0.88
SH3D19-213ENST00000604922 KCNMB2Q9Y691 235 aa9.57□□□□□ -0.88
SH3D19-213ENST00000604922 SPDYE3A6NKU9 549 aa9.56□□□□□ -0.88
SH3D19-213ENST00000604922 LCE3BQ5TA77 95 aa9.56□□□□□ -0.88
SH3D19-213ENST00000604922 MICALL1Q8N3F8 863 aa9.56□□□□□ -0.88
SH3D19-213ENST00000604922 GPR152Q8TDT2 470 aa9.56□□□□□ -0.88
SH3D19-213ENST00000604922 STARD13Q9Y3M8 1113 aa9.56□□□□□ -0.88
SH3D19-213ENST00000604922 UBAP1LF5GYI3 381 aa9.55□□□□□ -0.88
SH3D19-213ENST00000604922 ZBTB39O15060 712 aa9.55□□□□□ -0.88
SH3D19-213ENST00000604922 LILRB5O75023 590 aa9.55□□□□□ -0.88
SH3D19-213ENST00000604922 NOM1Q5C9Z4 860 aaKnown RBP9.55□□□□□ -0.88
SH3D19-213ENST00000604922 DCAF5Q96JK2 942 aa9.55□□□□□ -0.88
SH3D19-213ENST00000604922 ALBP02768 609 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 PSAPP07602 524 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 PCSK2P16519 638 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 ALKBH2Q6NS38 261 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 PHLDB3Q6NSJ2 640 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 FAM35AQ86V20 835 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 NLRP13Q86W25 1043 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 Q8N3U1 123 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 TRPM4Q8TD43 1214 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 SUV39H2Q9H5I1 410 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 PRDM6Q9NQX0 595 aa9.54□□□□□ -0.88
SH3D19-213ENST00000604922 TLR7Q9NYK1 1049 aaKnown RBP9.54□□□□□ -0.88
SH3D19-213ENST00000604922 RPLP1P05386 114 aaKnown RBP9.53□□□□□ -0.88
SH3D19-213ENST00000604922 PLAURQ03405 335 aa9.53□□□□□ -0.88
SH3D19-213ENST00000604922 PSAPL1Q6NUJ1 521 aa9.53□□□□□ -0.88
SH3D19-213ENST00000604922 RETREG2Q8NC44 543 aa9.53□□□□□ -0.88
SH3D19-213ENST00000604922 TTC16Q8NEE8 873 aa9.53□□□□□ -0.88
SH3D19-213ENST00000604922 PLVAPQ9BX97 442 aa9.53□□□□□ -0.88
SH3D19-213ENST00000604922 JPH1Q9HDC5 661 aaPredicted RBP9.53□□□□□ -0.88
SH3D19-213ENST00000604922 RGS9O75916 674 aaPredicted RBP9.52□□□□□ -0.89
SH3D19-213ENST00000604922 ABL1P00519 1130 aa9.52□□□□□ -0.89
SH3D19-213ENST00000604922 NRLP54845 237 aa9.52□□□□□ -0.89
SH3D19-213ENST00000604922 GPLD1P80108 840 aa9.52□□□□□ -0.89
SH3D19-213ENST00000604922 SF3B2Q13435 895 aaKnown RBP9.52□□□□□ -0.89
SH3D19-213ENST00000604922 AAMPQ13685 434 aa9.52□□□□□ -0.89
SH3D19-213ENST00000604922 TRIP4Q15650 581 aaPredicted RBP9.52□□□□□ -0.89
SH3D19-213ENST00000604922 C20orf204Q6ZNR8 217 aa9.52□□□□□ -0.89
SH3D19-213ENST00000604922 NUDT8Q8WV74 236 aa9.52□□□□□ -0.89
SH3D19-213ENST00000604922 MMP20O60882 483 aa9.51□□□□□ -0.89
SH3D19-213ENST00000604922 FAM13AO94988 1023 aa9.51□□□□□ -0.89
SH3D19-213ENST00000604922 CPB1P15086 417 aa9.51□□□□□ -0.89
SH3D19-213ENST00000604922 MPSTP25325 297 aa9.51□□□□□ -0.89
SH3D19-213ENST00000604922 FKBP4Q02790 459 aaKnown RBP eCLIP9.51□□□□□ -0.89
SH3D19-213ENST00000604922 TTC39BQ5VTQ0 682 aaPredicted RBP9.51□□□□□ -0.89
SH3D19-213ENST00000604922 C8orf86Q6ZUL3 223 aa9.51□□□□□ -0.89
SH3D19-213ENST00000604922 TRIM11Q96F44 468 aa9.51□□□□□ -0.89
SH3D19-213ENST00000604922 ZBTB42B2RXF5 422 aa9.5□□□□□ -0.89
SH3D19-213ENST00000604922 COL8A1P27658 744 aa9.5□□□□□ -0.89
SH3D19-213ENST00000604922 SOX18P35713 384 aa9.5□□□□□ -0.89
SH3D19-213ENST00000604922 EIF1AXP47813 144 aaKnown RBP9.5□□□□□ -0.89
SH3D19-213ENST00000604922 MLLT1Q03111 559 aaPredicted RBP9.5□□□□□ -0.89
SH3D19-213ENST00000604922 DNM1Q05193 864 aaKnown RBP9.5□□□□□ -0.89
SH3D19-213ENST00000604922 MTMR3Q13615 1198 aa9.5□□□□□ -0.89
SH3D19-213ENST00000604922 PRRT3Q5FWE3 981 aa9.5□□□□□ -0.89
SH3D19-213ENST00000604922 ELMSAN1Q6PJG2 1045 aa9.5□□□□□ -0.89
SH3D19-213ENST00000604922 ATCAYQ86WG3 371 aa9.5□□□□□ -0.89
SH3D19-213ENST00000604922 EDEM1Q92611 657 aa9.5□□□□□ -0.89
SH3D19-213ENST00000604922 NUDT16Q96DE0 195 aaKnown RBP9.5□□□□□ -0.89
SH3D19-213ENST00000604922 RBSNQ9H1K0 784 aa9.5□□□□□ -0.89
SH3D19-213ENST00000604922 FRRS1LQ9P0K9 344 aa9.5□□□□□ -0.89
SH3D19-213ENST00000604922 KRTAP4-12Q9BQ66 201 aa9.49□□□□□ -0.89
SH3D19-213ENST00000604922 KRTAP9-9Q9BYP9 154 aa9.49□□□□□ -0.89
SH3D19-213ENST00000604922 KRTAP9-4Q9BYQ2 154 aa9.49□□□□□ -0.89
SH3D19-213ENST00000604922 NAGPAQ9UK23 515 aa9.49□□□□□ -0.89
SH3D19-213ENST00000604922 LOC102724428A0A0B4J2F2 783 aa9.48□□□□□ -0.89
SH3D19-213ENST00000604922 MSTNO14793 375 aa9.48□□□□□ -0.89
SH3D19-213ENST00000604922 GHRHP01286 108 aa9.48□□□□□ -0.89
SH3D19-213ENST00000604922 ITGB2P05107 769 aa9.48□□□□□ -0.89
SH3D19-213ENST00000604922 EIF2AK2P19525 551 aaKnown RBP9.48□□□□□ -0.89
SH3D19-213ENST00000604922 MZF1P28698 734 aaPredicted RBP9.48□□□□□ -0.89
SH3D19-213ENST00000604922 SIK1P57059 783 aa9.48□□□□□ -0.89
SH3D19-213ENST00000604922 TRAPPC3LQ5T215 181 aa9.48□□□□□ -0.89
SH3D19-213ENST00000604922 PDE12Q6L8Q7 609 aaKnown RBP9.48□□□□□ -0.89
SH3D19-213ENST00000604922 HFE2Q6ZVN8 426 aa9.48□□□□□ -0.89
SH3D19-213ENST00000604922 NID1P14543 1247 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms