RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 CHGBP05060 677 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 DEKP35659 375 aaKnown RBP13.12□□□□□ -0.31
LINC01235-201ENST00000604724 CCDC57Q2TAC2 916 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 HSP90AB3PQ58FF7 597 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 PTF1AQ7RTS3 328 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 FNBP4Q8N3X1 1017 aaPredicted RBP13.12□□□□□ -0.31
LINC01235-201ENST00000604724 ZNF609O15014 1411 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 EP400Q96L91 3159 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 ERVV-1B6SEH8 477 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 CSF1RP07333 972 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 NEUROD6Q96NK8 337 aa13.12□□□□□ -0.31
LINC01235-201ENST00000604724 CDHR2Q9BYE9 1310 aa13.11□□□□□ -0.31
LINC01235-201ENST00000604724 MYH3P11055 1940 aa13.11□□□□□ -0.31
LINC01235-201ENST00000604724 CIAO1O76071 339 aa13.11□□□□□ -0.31
LINC01235-201ENST00000604724 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
LINC01235-201ENST00000604724 RUFY2Q8WXA3 655 aa13.11□□□□□ -0.31
LINC01235-201ENST00000604724 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
LINC01235-201ENST00000604724 PODXL2Q9NZ53 605 aa13.11□□□□□ -0.31
LINC01235-201ENST00000604724 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
LINC01235-201ENST00000604724 COL5A3P25940 1745 aaPredicted RBP13.11□□□□□ -0.31
LINC01235-201ENST00000604724 ZNF34Q8IZ26 560 aa13.11□□□□□ -0.31
LINC01235-201ENST00000604724 ZGPATQ8N5A5 531 aaKnown RBP13.11□□□□□ -0.31
LINC01235-201ENST00000604724 GREM2Q9H772 168 aa13.11□□□□□ -0.31
LINC01235-201ENST00000604724 TRMT112Q9UI30 125 aaKnown RBP13.11□□□□□ -0.31
LINC01235-201ENST00000604724 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
LINC01235-201ENST00000604724 A0A1B0GUL7 405 aa13.1□□□□□ -0.31
LINC01235-201ENST00000604724 IRS4O14654 1257 aaPredicted RBP13.1□□□□□ -0.31
LINC01235-201ENST00000604724 KCNQ4P56696 695 aa13.1□□□□□ -0.31
LINC01235-201ENST00000604724 NOL8Q76FK4 1167 aaKnown RBP13.1□□□□□ -0.31
LINC01235-201ENST00000604724 TTLL11Q8NHH1 800 aa13.1□□□□□ -0.31
LINC01235-201ENST00000604724 GPR108Q9NPR9 543 aa13.1□□□□□ -0.31
LINC01235-201ENST00000604724 USP21Q9UK80 565 aa13.1□□□□□ -0.31
LINC01235-201ENST00000604724 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
LINC01235-201ENST00000604724 RAB3GAP1Q15042 981 aa13.1□□□□□ -0.31
LINC01235-201ENST00000604724 DDX46Q7L014 1031 aaKnown RBP13.1□□□□□ -0.31
LINC01235-201ENST00000604724 TNPO1Q92973 898 aaKnown RBP13.1□□□□□ -0.31
LINC01235-201ENST00000604724 HAUS7Q99871 368 aa13.1□□□□□ -0.31
LINC01235-201ENST00000604724 HIP1O00291 1037 aa13.09□□□□□ -0.31
LINC01235-201ENST00000604724 CAMTA2O94983 1202 aa13.09□□□□□ -0.31
LINC01235-201ENST00000604724 ITGA6P23229 1130 aa13.09□□□□□ -0.31
LINC01235-201ENST00000604724 CTSWP56202 376 aa13.09□□□□□ -0.31
LINC01235-201ENST00000604724 IFIT5Q13325 482 aaKnown RBP13.09□□□□□ -0.31
LINC01235-201ENST00000604724 FAM182BQ5T319 152 aa13.09□□□□□ -0.31
LINC01235-201ENST00000604724 ZNF589Q86UQ0 364 aaPredicted RBP13.09□□□□□ -0.31
LINC01235-201ENST00000604724 TMX3Q96JJ7 454 aa13.09□□□□□ -0.31
LINC01235-201ENST00000604724 MED23Q9ULK4 1368 aa13.09□□□□□ -0.31
LINC01235-201ENST00000604724 RIC1Q4ADV7 1423 aa13.09□□□□□ -0.31
LINC01235-201ENST00000604724 MCM4P33991 863 aa13.08□□□□□ -0.31
LINC01235-201ENST00000604724 PRPF40BQ6NWY9 871 aaKnown RBP13.08□□□□□ -0.31
LINC01235-201ENST00000604724 SNRKQ9NRH2 765 aa13.08□□□□□ -0.31
LINC01235-201ENST00000604724 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.32
LINC01235-201ENST00000604724 SPATA31A6Q5VVP1 1343 aa13.08□□□□□ -0.32
LINC01235-201ENST00000604724 FAM177BA6PVY3 158 aa13.08□□□□□ -0.32
LINC01235-201ENST00000604724 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.32
LINC01235-201ENST00000604724 SUSD4Q5VX71 490 aa13.08□□□□□ -0.32
LINC01235-201ENST00000604724 CPA1P15085 419 aa13.07□□□□□ -0.32
LINC01235-201ENST00000604724 SSFA2P28290 1259 aa13.07□□□□□ -0.32
LINC01235-201ENST00000604724 ADORA1P30542 326 aa13.07□□□□□ -0.32
LINC01235-201ENST00000604724 PKP1Q13835 747 aa13.07□□□□□ -0.32
LINC01235-201ENST00000604724 LINC00116Q8NCU8 138 aa13.07□□□□□ -0.32
LINC01235-201ENST00000604724 SMARCC1Q92922 1105 aaPredicted RBP13.07□□□□□ -0.32
LINC01235-201ENST00000604724 CEP126Q9P2H0 1117 aa13.07□□□□□ -0.32
LINC01235-201ENST00000604724 NECTIN1Q15223 517 aa13.07□□□□□ -0.32
LINC01235-201ENST00000604724 ADCK5Q3MIX3 580 aa13.07□□□□□ -0.32
LINC01235-201ENST00000604724 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
LINC01235-201ENST00000604724 RBM8AQ9Y5S9 174 aaKnown RBP13.07□□□□□ -0.32
LINC01235-201ENST00000604724 ZNF831Q5JPB2 1677 aa13.07□□□□□ -0.32
LINC01235-201ENST00000604724 GOLIM4O00461 696 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 HCLS1P14317 486 aaPredicted RBP13.06□□□□□ -0.32
LINC01235-201ENST00000604724 SLFNL1Q499Z3 407 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 SMIM5Q71RC9 77 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 SEC62Q99442 399 aaKnown RBP13.06□□□□□ -0.32
LINC01235-201ENST00000604724 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 RIPOR2Q9Y4F9 1068 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 BTAF1O14981 1849 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 PDE8AO60658 829 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 COL9A3Q14050 684 aaPredicted RBP13.06□□□□□ -0.32
LINC01235-201ENST00000604724 LDHAL6AQ6ZMR3 332 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 CERKQ8TCT0 537 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 TTC14Q96N46 770 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 PAG1Q9NWQ8 432 aa13.06□□□□□ -0.32
LINC01235-201ENST00000604724 DDX60Q8IY21 1712 aaKnown RBP13.06□□□□□ -0.32
LINC01235-201ENST00000604724 BCORQ6W2J9 1755 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 CASTP20810 708 aaKnown RBP13.05□□□□□ -0.32
LINC01235-201ENST00000604724 HSPA1LP34931 641 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 MCM2P49736 904 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 CCDC129Q6ZRS4 1044 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 KBTBD3Q8NAB2 608 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 KCNB2Q92953 911 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 XAGE2Q96GT9 111 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 TAF6LQ9Y6J9 622 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 RFX7Q2KHR2 1363 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 ANKRD18BA2A2Z9 1011 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 IFIT1P09914 478 aaKnown RBP13.05□□□□□ -0.32
LINC01235-201ENST00000604724 GSE1Q14687 1217 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 CREB3L3Q68CJ9 461 aa13.05□□□□□ -0.32
LINC01235-201ENST00000604724 LARP6Q9BRS8 491 aaKnown RBP13.05□□□□□ -0.32
LINC01235-201ENST00000604724 SH3TC1Q8TE82 1336 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms