RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 CUL9Q8IWT3 2517 aa19.47■□□□□ 0.71
TRIM11-205ENST00000602308 POLR3GLQ9BT43 218 aa19.47■□□□□ 0.71
TRIM11-205ENST00000602308 DPF2Q92785 391 aa19.46■□□□□ 0.71
TRIM11-205ENST00000602308 COL6A3P12111 3177 aa19.46■□□□□ 0.71
TRIM11-205ENST00000602308 BTBD11A6QL63 1104 aa19.45■□□□□ 0.7
TRIM11-205ENST00000602308 GNAT3A8MTJ3 354 aa19.45■□□□□ 0.7
TRIM11-205ENST00000602308 RBM26Q5T8P6 1007 aaKnown RBP19.45■□□□□ 0.7
TRIM11-205ENST00000602308 TMX4Q9H1E5 349 aaPredicted RBP19.45■□□□□ 0.7
TRIM11-205ENST00000602308 R3HDMLQ9H3Y0 253 aa19.45■□□□□ 0.7
TRIM11-205ENST00000602308 PANK3Q9H999 370 aa19.45■□□□□ 0.7
TRIM11-205ENST00000602308 KIAA0100Q14667 2235 aaKnown RBP19.45■□□□□ 0.7
TRIM11-205ENST00000602308 FKTNO75072 461 aa19.44■□□□□ 0.7
TRIM11-205ENST00000602308 EN2P19622 333 aaPredicted RBP19.44■□□□□ 0.7
TRIM11-205ENST00000602308 INTS3Q68E01 1043 aaKnown RBP19.44■□□□□ 0.7
TRIM11-205ENST00000602308 DPP8Q6V1X1 898 aaPredicted RBP19.44■□□□□ 0.7
TRIM11-205ENST00000602308 CDCA5Q96FF9 252 aa19.44■□□□□ 0.7
TRIM11-205ENST00000602308 SNRPA1P09661 255 aaKnown RBP19.43■□□□□ 0.7
TRIM11-205ENST00000602308 OTUD5Q96G74 571 aa19.43■□□□□ 0.7
TRIM11-205ENST00000602308 PSMD14O00487 310 aa19.42■□□□□ 0.7
TRIM11-205ENST00000602308 TM4SF4P48230 202 aa19.42■□□□□ 0.7
TRIM11-205ENST00000602308 SUSD4Q5VX71 490 aa19.42■□□□□ 0.7
TRIM11-205ENST00000602308 MPNDQ8N594 471 aa19.42■□□□□ 0.7
TRIM11-205ENST00000602308 ASTN2O75129 1339 aaPredicted RBP19.42■□□□□ 0.7
TRIM11-205ENST00000602308 UBN2Q6ZU65 1347 aa19.42■□□□□ 0.7
TRIM11-205ENST00000602308 CEMIPQ8WUJ3 1361 aa19.42■□□□□ 0.7
TRIM11-205ENST00000602308 PAPPA2Q9BXP8 1791 aa19.42■□□□□ 0.7
TRIM11-205ENST00000602308 SULF1Q8IWU6 871 aa19.41■□□□□ 0.7
TRIM11-205ENST00000602308 CEP290O15078 2479 aa19.4■□□□□ 0.7
TRIM11-205ENST00000602308 GPTP24298 496 aa19.4■□□□□ 0.7
TRIM11-205ENST00000602308 MOB2Q70IA6 237 aa19.4■□□□□ 0.7
TRIM11-205ENST00000602308 SP8Q8IXZ3 490 aa19.4■□□□□ 0.7
TRIM11-205ENST00000602308 GGA3Q9NZ52 723 aa19.4■□□□□ 0.7
TRIM11-205ENST00000602308 ABCC4O15439 1325 aa19.4■□□□□ 0.7
TRIM11-205ENST00000602308 RANBP2P49792 3224 aaKnown RBP19.4■□□□□ 0.7
TRIM11-205ENST00000602308 TRIM17Q9Y577 477 aa19.39■□□□□ 0.69
TRIM11-205ENST00000602308 IBTKQ9P2D0 1353 aaPredicted RBP19.39■□□□□ 0.69
TRIM11-205ENST00000602308 ERVV-1B6SEH8 477 aa19.38■□□□□ 0.69
TRIM11-205ENST00000602308 H0YGN5 161 aa19.38■□□□□ 0.69
TRIM11-205ENST00000602308 NTSR2O95665 410 aa19.38■□□□□ 0.69
TRIM11-205ENST00000602308 FKBP1BP68106 108 aa19.38■□□□□ 0.69
TRIM11-205ENST00000602308 GAS2L2Q8NHY3 880 aa19.38■□□□□ 0.69
TRIM11-205ENST00000602308 CFHR5Q9BXR6 569 aa19.38■□□□□ 0.69
TRIM11-205ENST00000602308 KIF4BQ2VIQ3 1234 aa19.37■□□□□ 0.69
TRIM11-205ENST00000602308 OTOP1Q7RTM1 612 aa19.37■□□□□ 0.69
TRIM11-205ENST00000602308 NLRP3Q96P20 1036 aa19.37■□□□□ 0.69
TRIM11-205ENST00000602308 RBBP6Q7Z6E9 1792 aaKnown RBP19.37■□□□□ 0.69
TRIM11-205ENST00000602308 NGEFQ8N5V2 710 aa19.36■□□□□ 0.69
TRIM11-205ENST00000602308 KCNQ5Q9NR82 932 aa19.36■□□□□ 0.69
TRIM11-205ENST00000602308 MAP3K15Q6ZN16 1313 aa19.35■□□□□ 0.69
TRIM11-205ENST00000602308 UBE2Q2LH0YL09 131 aa19.35■□□□□ 0.69
TRIM11-205ENST00000602308 DIAPH1O60610 1272 aaKnown RBP19.35■□□□□ 0.69
TRIM11-205ENST00000602308 BBOX1O75936 387 aa19.35■□□□□ 0.69
TRIM11-205ENST00000602308 RPS12P25398 132 aaKnown RBP19.35■□□□□ 0.69
TRIM11-205ENST00000602308 MKRN3Q13064 507 aaKnown RBP19.35■□□□□ 0.69
TRIM11-205ENST00000602308 CHRDL2Q6WN34 429 aa19.35■□□□□ 0.69
TRIM11-205ENST00000602308 DBNDD1Q9H9R9 158 aa19.35■□□□□ 0.69
TRIM11-205ENST00000602308 TTLL7Q6ZT98 887 aa19.34■□□□□ 0.69
TRIM11-205ENST00000602308 ZNF34Q8IZ26 560 aa19.34■□□□□ 0.69
TRIM11-205ENST00000602308 NUP98P52948 1817 aa19.34■□□□□ 0.69
TRIM11-205ENST00000602308 DUOX1Q9NRD9 1551 aa19.33■□□□□ 0.69
TRIM11-205ENST00000602308 ANGEL2Q5VTE6 544 aaKnown RBP19.33■□□□□ 0.68
TRIM11-205ENST00000602308 ARMC5Q96C12 935 aa19.33■□□□□ 0.68
TRIM11-205ENST00000602308 RBM27Q9P2N5 1060 aaKnown RBP19.33■□□□□ 0.68
TRIM11-205ENST00000602308 RTL9Q8NET4 1388 aa19.32■□□□□ 0.68
TRIM11-205ENST00000602308 PTPN22Q9Y2R2 807 aa19.32■□□□□ 0.68
TRIM11-205ENST00000602308 MNX1P50219 401 aaPredicted RBP19.31■□□□□ 0.68
TRIM11-205ENST00000602308 SLC10A5Q5PT55 438 aa19.31■□□□□ 0.68
TRIM11-205ENST00000602308 ZBTB3Q9H5J0 574 aa19.31■□□□□ 0.68
TRIM11-205ENST00000602308 SREBF2Q12772 1141 aa19.3■□□□□ 0.68
TRIM11-205ENST00000602308 SCARF1Q14162 830 aa19.3■□□□□ 0.68
TRIM11-205ENST00000602308 WASHC4Q2M389 1173 aa19.3■□□□□ 0.68
TRIM11-205ENST00000602308 SCAF8Q9UPN6 1271 aaKnown RBP19.3■□□□□ 0.68
TRIM11-205ENST00000602308 RIMBP2O15034 1052 aa19.29■□□□□ 0.68
TRIM11-205ENST00000602308 PPP1R42Q7Z4L9 355 aa19.29■□□□□ 0.68
TRIM11-205ENST00000602308 PRAMEF18Q5VWM3 479 aa19.28■□□□□ 0.68
TRIM11-205ENST00000602308 KIF6Q6ZMV9 814 aa19.28■□□□□ 0.68
TRIM11-205ENST00000602308 ECE2O60344 883 aa19.27■□□□□ 0.68
TRIM11-205ENST00000602308 GRAPQ13588 217 aa19.27■□□□□ 0.68
TRIM11-205ENST00000602308 DOK7Q18PE1 504 aa19.27■□□□□ 0.68
TRIM11-205ENST00000602308 GRAPLQ8TC17 118 aaPredicted RBP19.27■□□□□ 0.68
TRIM11-205ENST00000602308 PHACTR3Q96KR7 559 aa19.27■□□□□ 0.68
TRIM11-205ENST00000602308 TMEM106CQ9BVX2 250 aa19.27■□□□□ 0.68
TRIM11-205ENST00000602308 VIL1P09327 827 aaKnown RBP19.26■□□□□ 0.67
TRIM11-205ENST00000602308 RRP7AQ9Y3A4 280 aaKnown RBP19.26■□□□□ 0.67
TRIM11-205ENST00000602308 KNSTRNQ9Y448 316 aa19.26■□□□□ 0.67
TRIM11-205ENST00000602308 CAP1Q01518 475 aa19.25■□□□□ 0.67
TRIM11-205ENST00000602308 GIGYF2Q6Y7W6 1299 aaKnown RBP19.25■□□□□ 0.67
TRIM11-205ENST00000602308 MCM10Q7L590 875 aa19.25■□□□□ 0.67
TRIM11-205ENST00000602308 U2SURPO15042 1029 aaKnown RBP19.24■□□□□ 0.67
TRIM11-205ENST00000602308 ALDH1A1P00352 501 aa19.24■□□□□ 0.67
TRIM11-205ENST00000602308 ZNF280AP59817 542 aaPredicted RBP19.24■□□□□ 0.67
TRIM11-205ENST00000602308 TTLL12Q14166 644 aaPredicted RBP19.24■□□□□ 0.67
TRIM11-205ENST00000602308 PARP10Q53GL7 1025 aa19.24■□□□□ 0.67
TRIM11-205ENST00000602308 AMER1Q5JTC6 1135 aaPredicted RBP19.24■□□□□ 0.67
TRIM11-205ENST00000602308 DDX46Q7L014 1031 aaKnown RBP19.24■□□□□ 0.67
TRIM11-205ENST00000602308 CD99L2Q8TCZ2 262 aa19.24■□□□□ 0.67
TRIM11-205ENST00000602308 ZNF333Q96JL9 665 aa19.24■□□□□ 0.67
TRIM11-205ENST00000602308 UTP14AQ9BVJ6 771 aaKnown RBP19.24■□□□□ 0.67
TRIM11-205ENST00000602308 POLLQ9UGP5 575 aa19.24■□□□□ 0.67
TRIM11-205ENST00000602308 HCLS1P14317 486 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms