RNA–Protein interactions for RNA: ENST00000601925.5

SMG9-212, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 550 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-212ENST00000601925 FLIIQ13045 1269 aa17.06■□□□□ 0.32
SMG9-212ENST00000601925 LDHDQ86WU2 507 aa17.06■□□□□ 0.32
SMG9-212ENST00000601925 NOB1Q9ULX3 412 aaKnown RBP17.06■□□□□ 0.32
SMG9-212ENST00000601925 PASKQ96RG2 1323 aa17.05■□□□□ 0.32
SMG9-212ENST00000601925 DDX58O95786 925 aaKnown RBP17.05■□□□□ 0.32
SMG9-212ENST00000601925 FRAT1Q92837 279 aaPredicted RBP17.05■□□□□ 0.32
SMG9-212ENST00000601925 RBM17Q96I25 401 aaKnown RBP17.05■□□□□ 0.32
SMG9-212ENST00000601925 UTP14AQ9BVJ6 771 aaKnown RBP17.05■□□□□ 0.32
SMG9-212ENST00000601925 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
SMG9-212ENST00000601925 ADAMTSL1Q8N6G6 1762 aa17.05■□□□□ 0.32
SMG9-212ENST00000601925 PTPRCP08575 1304 aa17.04■□□□□ 0.32
SMG9-212ENST00000601925 ITGBL1O95965 494 aaPredicted RBP17.04■□□□□ 0.32
SMG9-212ENST00000601925 FKBP5Q13451 457 aaPredicted RBP17.04■□□□□ 0.32
SMG9-212ENST00000601925 GRIPAP1Q4V328 841 aa17.04■□□□□ 0.32
SMG9-212ENST00000601925 NLRP10Q86W26 655 aa17.04■□□□□ 0.32
SMG9-212ENST00000601925 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.04■□□□□ 0.32
SMG9-212ENST00000601925 ARHGAP45Q92619 1136 aa17.04■□□□□ 0.32
SMG9-212ENST00000601925 NLRP3Q96P20 1036 aa17.04■□□□□ 0.32
SMG9-212ENST00000601925 HACL1Q9UJ83 578 aa17.04■□□□□ 0.32
SMG9-212ENST00000601925 ANKRD36CQ5JPF3 1778 aa17.04■□□□□ 0.32
SMG9-212ENST00000601925 RNF123Q5XPI4 1314 aa17.03■□□□□ 0.32
SMG9-212ENST00000601925 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
SMG9-212ENST00000601925 COL13A1Q5TAT6 717 aaPredicted RBP17.03■□□□□ 0.32
SMG9-212ENST00000601925 ZKSCAN2Q63HK3 967 aa17.03■□□□□ 0.32
SMG9-212ENST00000601925 ANKRD13DQ6ZTN6 518 aa17.03■□□□□ 0.32
SMG9-212ENST00000601925 GPC2Q8N158 579 aa17.03■□□□□ 0.32
SMG9-212ENST00000601925 JDP2Q8WYK2 163 aa17.03■□□□□ 0.32
SMG9-212ENST00000601925 API5Q9BZZ5 524 aaKnown RBP17.03■□□□□ 0.32
SMG9-212ENST00000601925 EPHX2P34913 555 aa17.02■□□□□ 0.32
SMG9-212ENST00000601925 TCIRG1Q13488 830 aa17.02■□□□□ 0.32
SMG9-212ENST00000601925 HSP90AB3PQ58FF7 597 aa17.02■□□□□ 0.32
SMG9-212ENST00000601925 KSR2Q6VAB6 950 aa17.02■□□□□ 0.32
SMG9-212ENST00000601925 RIC3Q7Z5B4 369 aa17.02■□□□□ 0.32
SMG9-212ENST00000601925 CACNA1FO60840 1977 aa17.01■□□□□ 0.31
SMG9-212ENST00000601925 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
SMG9-212ENST00000601925 ATP6V0A2Q9Y487 856 aa17.01■□□□□ 0.31
SMG9-212ENST00000601925 SUPT16HQ9Y5B9 1047 aaKnown RBP17.01■□□□□ 0.31
SMG9-212ENST00000601925 LAMB2P55268 1798 aa17.01■□□□□ 0.31
SMG9-212ENST00000601925 LTBP1Q14766 1721 aa17.01■□□□□ 0.31
SMG9-212ENST00000601925 ABCC4O15439 1325 aa17■□□□□ 0.31
SMG9-212ENST00000601925 PI4KAP2A4QPH2 592 aa17■□□□□ 0.31
SMG9-212ENST00000601925 HCLS1P14317 486 aaPredicted RBP17■□□□□ 0.31
SMG9-212ENST00000601925 RRP1P56182 461 aaKnown RBP17■□□□□ 0.31
SMG9-212ENST00000601925 EAPPQ56P03 285 aaPredicted RBP17■□□□□ 0.31
SMG9-212ENST00000601925 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
SMG9-212ENST00000601925 PI4KAP1Q8N8J0 262 aa17■□□□□ 0.31
SMG9-212ENST00000601925 PLIN1O60240 522 aa16.99■□□□□ 0.31
SMG9-212ENST00000601925 HSPA1AP0DMV8 641 aaKnown RBP16.99■□□□□ 0.31
SMG9-212ENST00000601925 HSPA1BP0DMV9 641 aaKnown RBP16.99■□□□□ 0.31
SMG9-212ENST00000601925 MS4A1P11836 297 aa16.99■□□□□ 0.31
SMG9-212ENST00000601925 SCNN1DP51172 638 aa16.99■□□□□ 0.31
SMG9-212ENST00000601925 EIF6P56537 245 aaKnown RBP16.99■□□□□ 0.31
SMG9-212ENST00000601925 PNMA8AQ86V59 439 aaPredicted RBP16.99■□□□□ 0.31
SMG9-212ENST00000601925 LARGE2Q8N3Y3 721 aa16.99■□□□□ 0.31
SMG9-212ENST00000601925 RTFDC1Q9BY42 306 aaPredicted RBP16.99■□□□□ 0.31
SMG9-212ENST00000601925 MKRN1Q9UHC7 482 aaKnown RBP16.99■□□□□ 0.31
SMG9-212ENST00000601925 MAP3K2Q9Y2U5 619 aa16.99■□□□□ 0.31
SMG9-212ENST00000601925 BBOX1O75936 387 aa16.98■□□□□ 0.31
SMG9-212ENST00000601925 TRIM27P14373 513 aa16.98■□□□□ 0.31
SMG9-212ENST00000601925 DNAAF4Q8WXU2 420 aa16.98■□□□□ 0.31
SMG9-212ENST00000601925 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
SMG9-212ENST00000601925 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
SMG9-212ENST00000601925 CNTNAP1P78357 1384 aa16.98■□□□□ 0.31
SMG9-212ENST00000601925 SH3TC1Q8TE82 1336 aa16.97■□□□□ 0.31
SMG9-212ENST00000601925 TAF1P21675 1872 aa16.97■□□□□ 0.31
SMG9-212ENST00000601925 F6X3S4 739 aa16.97■□□□□ 0.31
SMG9-212ENST00000601925 MAP1SQ66K74 1059 aaPredicted RBP16.97■□□□□ 0.31
SMG9-212ENST00000601925 SP8Q8IXZ3 490 aa16.97■□□□□ 0.31
SMG9-212ENST00000601925 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
SMG9-212ENST00000601925 ISCA1Q9BUE6 129 aa16.97■□□□□ 0.31
SMG9-212ENST00000601925 VPS33BQ9H267 617 aa16.97■□□□□ 0.31
SMG9-212ENST00000601925 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
SMG9-212ENST00000601925 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.31
SMG9-212ENST00000601925 PPIP5K2O43314 1243 aa16.96■□□□□ 0.31
SMG9-212ENST00000601925 EPS15P42566 896 aa16.96■□□□□ 0.31
SMG9-212ENST00000601925 NEXNQ0ZGT2 675 aa16.96■□□□□ 0.31
SMG9-212ENST00000601925 AOC3Q16853 763 aa16.96■□□□□ 0.31
SMG9-212ENST00000601925 SLC4A10Q6U841 1118 aa16.96■□□□□ 0.31
SMG9-212ENST00000601925 FTSJ3Q8IY81 847 aaKnown RBP16.96■□□□□ 0.31
SMG9-212ENST00000601925 DZIP1LQ8IYY4 767 aaKnown RBP16.96■□□□□ 0.31
SMG9-212ENST00000601925 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.31
SMG9-212ENST00000601925 METTL22Q9BUU2 404 aaPredicted RBP16.96■□□□□ 0.31
SMG9-212ENST00000601925 PDE3AQ14432 1141 aa16.95■□□□□ 0.3
SMG9-212ENST00000601925 NIM1KQ8IY84 436 aa16.95■□□□□ 0.3
SMG9-212ENST00000601925 MYD88Q99836 296 aa16.95■□□□□ 0.3
SMG9-212ENST00000601925 TNNQ9UQP3 1299 aa16.95■□□□□ 0.3
SMG9-212ENST00000601925 DDX60Q8IY21 1712 aaKnown RBP16.95■□□□□ 0.3
SMG9-212ENST00000601925 CXCL9Q07325 125 aa16.94■□□□□ 0.3
SMG9-212ENST00000601925 GRAPQ13588 217 aa16.94■□□□□ 0.3
SMG9-212ENST00000601925 DDX46Q7L014 1031 aaKnown RBP16.94■□□□□ 0.3
SMG9-212ENST00000601925 TNS4Q8IZW8 715 aa16.94■□□□□ 0.3
SMG9-212ENST00000601925 PIAS4Q8N2W9 510 aaPredicted RBP16.94■□□□□ 0.3
SMG9-212ENST00000601925 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
SMG9-212ENST00000601925 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
SMG9-212ENST00000601925 VEGFBP49765 207 aa16.93■□□□□ 0.3
SMG9-212ENST00000601925 CCT4P50991 539 aaKnown RBP16.93■□□□□ 0.3
SMG9-212ENST00000601925 KIAA2012Q0VF49 1180 aa16.93■□□□□ 0.3
SMG9-212ENST00000601925 TRIM28Q13263 835 aaKnown RBP16.93■□□□□ 0.3
SMG9-212ENST00000601925 SF3B3Q15393 1217 aaKnown RBP16.93■□□□□ 0.3
SMG9-212ENST00000601925 DPP8Q6V1X1 898 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms