RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 SNUPNO95149 360 aaKnown RBP11.39□□□□□ -0.59
NFKB1-212ENST00000600343 VPS53Q5VIR6 699 aa11.39□□□□□ -0.59
NFKB1-212ENST00000600343 MICAL1Q8TDZ2 1067 aa11.39□□□□□ -0.59
NFKB1-212ENST00000600343 OTUD7AQ8TE49 926 aaPredicted RBP11.39□□□□□ -0.59
NFKB1-212ENST00000600343 KIF9Q9HAQ2 790 aa11.39□□□□□ -0.59
NFKB1-212ENST00000600343 SMC3Q9UQE7 1217 aa11.39□□□□□ -0.59
NFKB1-212ENST00000600343 ABCC11Q96J66 1382 aa11.39□□□□□ -0.59
NFKB1-212ENST00000600343 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
NFKB1-212ENST00000600343 TXLNAP40222 546 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 RPS6KA3P51812 740 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 ANKRD23Q86SG2 305 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 C1QTNF12Q5T7M4 302 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 RSRC2Q7L4I2 434 aaKnown RBP11.38□□□□□ -0.59
NFKB1-212ENST00000600343 CCDC150Q8NCX0 1101 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 AFAP1L1Q8TED9 768 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 TTC21BQ7Z4L5 1316 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 SKAP2O75563 359 aaPredicted RBP11.38□□□□□ -0.59
NFKB1-212ENST00000600343 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
NFKB1-212ENST00000600343 PARD3BQ8TEW8 1205 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 MYO1FO00160 1098 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 ERLIN1O75477 346 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 NAA25Q14CX7 972 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 ARMC3Q5W041 872 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 TRIM74Q86UV6 250 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 TRIM73Q86UV7 250 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 CLSTN2Q9H4D0 955 aa11.38□□□□□ -0.59
NFKB1-212ENST00000600343 WDR62O43379 1518 aa11.37□□□□□ -0.59
NFKB1-212ENST00000600343 PEX19P40855 299 aa11.37□□□□□ -0.59
NFKB1-212ENST00000600343 MED14O60244 1454 aa11.37□□□□□ -0.59
NFKB1-212ENST00000600343 IQCB1Q15051 598 aa11.37□□□□□ -0.59
NFKB1-212ENST00000600343 BEND6Q5SZJ8 279 aaPredicted RBP11.37□□□□□ -0.59
NFKB1-212ENST00000600343 TTC6Q86TZ1 520 aa11.37□□□□□ -0.59
NFKB1-212ENST00000600343 RPUSD2Q8IZ73 545 aaKnown RBP11.37□□□□□ -0.59
NFKB1-212ENST00000600343 KCNJ6P48051 423 aa11.37□□□□□ -0.59
NFKB1-212ENST00000600343 PDCD2Q16342 344 aaPredicted RBP11.37□□□□□ -0.59
NFKB1-212ENST00000600343 FAM177A1Q8N128 213 aaPredicted RBP11.37□□□□□ -0.59
NFKB1-212ENST00000600343 CEP112Q8N8E3 955 aa11.37□□□□□ -0.59
NFKB1-212ENST00000600343 OSBPL5Q9H0X9 879 aaPredicted RBP11.37□□□□□ -0.59
NFKB1-212ENST00000600343 KRT85P78386 507 aa11.36□□□□□ -0.59
NFKB1-212ENST00000600343 TRIM65Q6PJ69 517 aa11.36□□□□□ -0.59
NFKB1-212ENST00000600343 MSL3Q8N5Y2 521 aaKnown RBP11.36□□□□□ -0.59
NFKB1-212ENST00000600343 ZBTB10Q96DT7 871 aa11.36□□□□□ -0.59
NFKB1-212ENST00000600343 SUDS3Q9H7L9 328 aaPredicted RBP11.36□□□□□ -0.59
NFKB1-212ENST00000600343 ANO2Q9NQ90 1003 aa11.36□□□□□ -0.59
NFKB1-212ENST00000600343 IMPACTQ9P2X3 320 aa11.36□□□□□ -0.59
NFKB1-212ENST00000600343 ADGBQ8N7X0 1667 aa11.36□□□□□ -0.59
NFKB1-212ENST00000600343 VPS37CA5D8V6 355 aaPredicted RBP11.36□□□□□ -0.59
NFKB1-212ENST00000600343 RBM43Q6ZSC3 357 aaKnown RBP11.36□□□□□ -0.59
NFKB1-212ENST00000600343 HNRNPLLQ8WVV9 542 aaKnown RBP11.36□□□□□ -0.59
NFKB1-212ENST00000600343 UTP14AQ9BVJ6 771 aaKnown RBP11.36□□□□□ -0.59
NFKB1-212ENST00000600343 APBB1O00213 710 aa11.36□□□□□ -0.59
NFKB1-212ENST00000600343 NAP1L1P55209 391 aaKnown RBP11.36□□□□□ -0.59
NFKB1-212ENST00000600343 SNX1Q13596 522 aa11.36□□□□□ -0.59
NFKB1-212ENST00000600343 WLSQ5T9L3 541 aa11.36□□□□□ -0.59
NFKB1-212ENST00000600343 MSH6P52701 1360 aa11.36□□□□□ -0.59
NFKB1-212ENST00000600343 NESP48681 1621 aa11.35□□□□□ -0.59
NFKB1-212ENST00000600343 NFXL1Q6ZNB6 911 aa11.35□□□□□ -0.59
NFKB1-212ENST00000600343 C11orf57Q6ZUT1 292 aaPredicted RBP11.35□□□□□ -0.59
NFKB1-212ENST00000600343 CEP57Q86XR8 500 aa11.35□□□□□ -0.59
NFKB1-212ENST00000600343 KIRREL3Q8IZU9 778 aa11.35□□□□□ -0.59
NFKB1-212ENST00000600343 FANCGO15287 622 aa11.35□□□□□ -0.59
NFKB1-212ENST00000600343 PECAM1P16284 738 aaPredicted RBP11.35□□□□□ -0.59
NFKB1-212ENST00000600343 MPHOSPH8Q99549 860 aa11.35□□□□□ -0.59
NFKB1-212ENST00000600343 DCTPP1Q9H773 170 aa11.35□□□□□ -0.59
NFKB1-212ENST00000600343 MAFGO15525 162 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 RNF40O75150 1001 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 ARMCX5Q6P1M9 558 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 TMC6Q7Z403 805 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 AMOTL1Q8IY63 956 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 SUGCTQ9HAC7 445 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 MTMR6Q9Y217 621 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 MAP3K9P80192 1104 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 ACTN3Q08043 901 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-212ENST00000600343 CEP85LQ5SZL2 805 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 BICD2Q8TD16 824 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 CENPHQ9H3R5 247 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 ZSWIM4Q9H7M6 989 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 MRFAP1Q9Y605 127 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 A2MP01023 1474 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 CDK13Q14004 1512 aaKnown RBP11.34□□□□□ -0.59
NFKB1-212ENST00000600343 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 KIAA0754O94854 1291 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 CASP8Q14790 479 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 TBC1D25Q3MII6 688 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 ALDH1L2Q3SY69 923 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 L1RE1Q9UN81 338 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 PTPRGP23470 1445 aa11.34□□□□□ -0.59
NFKB1-212ENST00000600343 EIF2AK4Q9P2K8 1649 aaKnown RBP11.34□□□□□ -0.59
NFKB1-212ENST00000600343 SMARCC1Q92922 1105 aaPredicted RBP11.33□□□□□ -0.6
NFKB1-212ENST00000600343 THUMPD2Q9BTF0 503 aaKnown RBP11.33□□□□□ -0.6
NFKB1-212ENST00000600343 ABCB6Q9NP58 842 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 NEFHP12036 1026 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 CCDC96Q2M329 555 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 SLC5A9Q2M3M2 681 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 KIAA1328Q86T90 577 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 SPDL1Q96EA4 605 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 SAAL1Q96ER3 474 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 ESYT1Q9BSJ8 1104 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 SHPRHQ149N8 1683 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms