RNA–Protein interactions for RNA: ENST00000599804.5

SMG9-209, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-209ENST00000599804 RTL9Q8NET4 1388 aa20.68■□□□□ 0.9
SMG9-209ENST00000599804 MTX1Q13505 466 aa20.67■□□□□ 0.9
SMG9-209ENST00000599804 CRY2Q49AN0 593 aa20.67■□□□□ 0.9
SMG9-209ENST00000599804 TTLL11Q8NHH1 800 aa20.67■□□□□ 0.9
SMG9-209ENST00000599804 BRCA1P38398 1863 aaKnown RBP20.67■□□□□ 0.9
SMG9-209ENST00000599804 TGFB2P61812 414 aa20.66■□□□□ 0.9
SMG9-209ENST00000599804 EPHA10Q5JZY3 1008 aa20.66■□□□□ 0.9
SMG9-209ENST00000599804 ERICH6BQ5W0A0 696 aa20.66■□□□□ 0.9
SMG9-209ENST00000599804 LMBR1LQ6UX01 489 aa20.66■□□□□ 0.9
SMG9-209ENST00000599804 RPAP2Q8IXW5 612 aaPredicted RBP20.66■□□□□ 0.9
SMG9-209ENST00000599804 C1orf115Q9H7X2 142 aa20.66■□□□□ 0.9
SMG9-209ENST00000599804 SPEF2Q9C093 1822 aa20.66■□□□□ 0.9
SMG9-209ENST00000599804 TAF1P21675 1872 aa20.65■□□□□ 0.9
SMG9-209ENST00000599804 ANKRD44Q8N8A2 993 aa20.65■□□□□ 0.9
SMG9-209ENST00000599804 H0YIN7 160 aa20.64■□□□□ 0.89
SMG9-209ENST00000599804 CEP85Q6P2H3 762 aa20.64■□□□□ 0.89
SMG9-209ENST00000599804 RPGRQ92834 1020 aaKnown RBP20.64■□□□□ 0.89
SMG9-209ENST00000599804 PPP1R1BQ9UD71 204 aaPredicted RBP20.64■□□□□ 0.89
SMG9-209ENST00000599804 CHMP3Q9Y3E7 222 aa20.64■□□□□ 0.89
SMG9-209ENST00000599804 SRGNP10124 158 aa20.63■□□□□ 0.89
SMG9-209ENST00000599804 NPR1P16066 1061 aa20.63■□□□□ 0.89
SMG9-209ENST00000599804 ATP8B2P98198 1209 aa20.63■□□□□ 0.89
SMG9-209ENST00000599804 IFIT5Q13325 482 aaKnown RBP20.63■□□□□ 0.89
SMG9-209ENST00000599804 C3orf67Q6ZVT6 689 aa20.63■□□□□ 0.89
SMG9-209ENST00000599804 DDX46Q7L014 1031 aaKnown RBP20.63■□□□□ 0.89
SMG9-209ENST00000599804 MASTLQ96GX5 879 aa20.63■□□□□ 0.89
SMG9-209ENST00000599804 RBM17Q96I25 401 aaKnown RBP20.63■□□□□ 0.89
SMG9-209ENST00000599804 ANKRD18BA2A2Z9 1011 aa20.62■□□□□ 0.89
SMG9-209ENST00000599804 HMMRO75330 724 aa20.62■□□□□ 0.89
SMG9-209ENST00000599804 HOXA10P31260 410 aaPredicted RBP20.62■□□□□ 0.89
SMG9-209ENST00000599804 CCDC57Q2TAC2 916 aa20.62■□□□□ 0.89
SMG9-209ENST00000599804 C2CD5Q86YS7 1000 aa20.62■□□□□ 0.89
SMG9-209ENST00000599804 CDC5LQ99459 802 aaKnown RBP20.62■□□□□ 0.89
SMG9-209ENST00000599804 GREM2Q9H772 168 aa20.62■□□□□ 0.89
SMG9-209ENST00000599804 SRGAP3O43295 1099 aa20.61■□□□□ 0.89
SMG9-209ENST00000599804 ITGA6P23229 1130 aa20.61■□□□□ 0.89
SMG9-209ENST00000599804 ALDH1B1P30837 517 aa20.61■□□□□ 0.89
SMG9-209ENST00000599804 FAM161AQ3B820 660 aa20.61■□□□□ 0.89
SMG9-209ENST00000599804 STYK1Q6J9G0 422 aa20.61■□□□□ 0.89
SMG9-209ENST00000599804 CRAMP1Q96RY5 1269 aa20.61■□□□□ 0.89
SMG9-209ENST00000599804 KLHL34Q8N239 644 aa20.6■□□□□ 0.89
SMG9-209ENST00000599804 SSH3Q8TE77 659 aa20.6■□□□□ 0.89
SMG9-209ENST00000599804 CCDC85AQ96PX6 553 aaPredicted RBP20.6■□□□□ 0.89
SMG9-209ENST00000599804 POLA2Q14181 598 aa20.59■□□□□ 0.89
SMG9-209ENST00000599804 PNMA6EA0A0J9YXQ4 647 aa20.58■□□□□ 0.89
SMG9-209ENST00000599804 GRAPQ13588 217 aa20.58■□□□□ 0.89
SMG9-209ENST00000599804 TAF7LQ5H9L4 462 aa20.58■□□□□ 0.89
SMG9-209ENST00000599804 ANKRD18AQ8IVF6 992 aa20.58■□□□□ 0.89
SMG9-209ENST00000599804 GRAPLQ8TC17 118 aaPredicted RBP20.58■□□□□ 0.89
SMG9-209ENST00000599804 CNKSR1Q969H4 720 aa20.58■□□□□ 0.89
SMG9-209ENST00000599804 FBXO3Q9UK99 471 aa20.58■□□□□ 0.89
SMG9-209ENST00000599804 PCDHB15Q9Y5E8 787 aa20.58■□□□□ 0.89
SMG9-209ENST00000599804 LRRC37AA6NMS7 1700 aa20.58■□□□□ 0.88
SMG9-209ENST00000599804 SLX4Q8IY92 1834 aa20.57■□□□□ 0.88
SMG9-209ENST00000599804 ARFGEF1Q9Y6D6 1849 aa20.57■□□□□ 0.88
SMG9-209ENST00000599804 A0A1B0GUL6 1792 aa20.57■□□□□ 0.88
SMG9-209ENST00000599804 CHRNA5P30532 468 aa20.57■□□□□ 0.88
SMG9-209ENST00000599804 IGHMBP2P38935 993 aaKnown RBP20.57■□□□□ 0.88
SMG9-209ENST00000599804 RFX5P48382 616 aaPredicted RBP20.57■□□□□ 0.88
SMG9-209ENST00000599804 TMC4Q7Z404 712 aa20.57■□□□□ 0.88
SMG9-209ENST00000599804 ZNF622Q969S3 477 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMG9-209ENST00000599804 FHDC1Q9C0D6 1143 aaPredicted RBP20.57■□□□□ 0.88
SMG9-209ENST00000599804 SEC31BQ9NQW1 1179 aa20.57■□□□□ 0.88
SMG9-209ENST00000599804 BBOX1O75936 387 aa20.56■□□□□ 0.88
SMG9-209ENST00000599804 DPEP1P16444 411 aa20.56■□□□□ 0.88
SMG9-209ENST00000599804 COPRSQ9NQ92 184 aa20.56■□□□□ 0.88
SMG9-209ENST00000599804 RPS8P62241 208 aaKnown RBP20.55■□□□□ 0.88
SMG9-209ENST00000599804 PTPN12Q05209 780 aaKnown RBP20.55■□□□□ 0.88
SMG9-209ENST00000599804 HDAC1Q13547 482 aaPredicted RBP20.55■□□□□ 0.88
SMG9-209ENST00000599804 SIRT2Q8IXJ6 389 aa20.55■□□□□ 0.88
SMG9-209ENST00000599804 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
SMG9-209ENST00000599804 PIM2Q9P1W9 311 aa20.55■□□□□ 0.88
SMG9-209ENST00000599804 A0A0G2JLW4 131 aa20.54■□□□□ 0.88
SMG9-209ENST00000599804 KCNA3P22001 575 aa20.54■□□□□ 0.88
SMG9-209ENST00000599804 TTLL6Q8N841 843 aa20.54■□□□□ 0.88
SMG9-209ENST00000599804 CELF1Q92879 486 aaKnown RBP20.54■□□□□ 0.88
SMG9-209ENST00000599804 RWDD1Q9H446 243 aaPredicted RBP20.54■□□□□ 0.88
SMG9-209ENST00000599804 BSDC1Q9NW68 430 aaPredicted RBP20.54■□□□□ 0.88
SMG9-209ENST00000599804 COL4A1P02462 1669 aa20.54■□□□□ 0.88
SMG9-209ENST00000599804 HSP90AB4PQ58FF6 505 aa20.53■□□□□ 0.88
SMG9-209ENST00000599804 LDHAL6AQ6ZMR3 332 aa20.53■□□□□ 0.88
SMG9-209ENST00000599804 SYT17Q9BSW7 474 aa20.53■□□□□ 0.88
SMG9-209ENST00000599804 PPEF1O14829 653 aaPredicted RBP20.52■□□□□ 0.88
SMG9-209ENST00000599804 CIAO1O76071 339 aa20.52■□□□□ 0.88
SMG9-209ENST00000599804 ZNF594Q96JF6 807 aaPredicted RBP20.52■□□□□ 0.88
SMG9-209ENST00000599804 NOP58Q9Y2X3 529 aaKnown RBP20.52■□□□□ 0.88
SMG9-209ENST00000599804 EYA2O00167 538 aa20.51■□□□□ 0.87
SMG9-209ENST00000599804 PRPF40BQ6NWY9 871 aaKnown RBP20.51■□□□□ 0.87
SMG9-209ENST00000599804 NLGN2Q8NFZ4 835 aa20.51■□□□□ 0.87
SMG9-209ENST00000599804 TMX4Q9H1E5 349 aaPredicted RBP20.51■□□□□ 0.87
SMG9-209ENST00000599804 CNNM1Q9NRU3 951 aa20.51■□□□□ 0.87
SMG9-209ENST00000599804 SURF6O75683 361 aaKnown RBP20.5■□□□□ 0.87
SMG9-209ENST00000599804 G3BP1Q13283 466 aaKnown RBP eCLIP20.5■□□□□ 0.87
SMG9-209ENST00000599804 DALRD3Q5D0E6 543 aaKnown RBP20.5■□□□□ 0.87
SMG9-209ENST00000599804 KLHDC4Q8TBB5 520 aa20.5■□□□□ 0.87
SMG9-209ENST00000599804 PA2G4Q9UQ80 394 aaKnown RBP20.5■□□□□ 0.87
SMG9-209ENST00000599804 MROH5Q6ZUA9 1318 aa20.5■□□□□ 0.87
SMG9-209ENST00000599804 IL15P40933 162 aaPredicted RBP20.49■□□□□ 0.87
SMG9-209ENST00000599804 CC2D2BQ6DHV5 1058 aa20.49■□□□□ 0.87
SMG9-209ENST00000599804 ERC1Q8IUD2 1116 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms