RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 ZBTB3Q9H5J0 574 aa20.7■□□□□ 0.9
LIG1-214ENST00000597146 GBA2Q9HCG7 927 aaPredicted RBP20.7■□□□□ 0.9
LIG1-214ENST00000597146 ABCC4O15439 1325 aa20.7■□□□□ 0.9
LIG1-214ENST00000597146 DLG5Q8TDM6 1919 aa20.69■□□□□ 0.9
LIG1-214ENST00000597146 KIF6Q6ZMV9 814 aa20.69■□□□□ 0.9
LIG1-214ENST00000597146 SUPT20HQ8NEM7 779 aa20.69■□□□□ 0.9
LIG1-214ENST00000597146 LRRC37AA6NMS7 1700 aa20.68■□□□□ 0.9
LIG1-214ENST00000597146 YDJCA8MPS7 323 aa20.68■□□□□ 0.9
LIG1-214ENST00000597146 ADM5C9JUS6 153 aa20.68■□□□□ 0.9
LIG1-214ENST00000597146 ZNF157P51786 506 aaPredicted RBP20.68■□□□□ 0.9
LIG1-214ENST00000597146 KIAA2012Q0VF49 1180 aa20.68■□□□□ 0.9
LIG1-214ENST00000597146 DPP8Q6V1X1 898 aaPredicted RBP20.68■□□□□ 0.9
LIG1-214ENST00000597146 SAMD7Q7Z3H4 446 aa20.68■□□□□ 0.9
LIG1-214ENST00000597146 RTF1Q92541 710 aaKnown RBP20.68■□□□□ 0.9
LIG1-214ENST00000597146 TMX4Q9H1E5 349 aaPredicted RBP20.68■□□□□ 0.9
LIG1-214ENST00000597146 HPS5Q9UPZ3 1129 aa20.68■□□□□ 0.9
LIG1-214ENST00000597146 PER1O15534 1290 aaPredicted RBP20.67■□□□□ 0.9
LIG1-214ENST00000597146 EGFRP00533 1210 aa20.67■□□□□ 0.9
LIG1-214ENST00000597146 TNIP1Q15025 636 aa20.67■□□□□ 0.9
LIG1-214ENST00000597146 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
LIG1-214ENST00000597146 ZBTB12Q9Y330 459 aaPredicted RBP20.67■□□□□ 0.9
LIG1-214ENST00000597146 H7C1D1 291 aa20.66■□□□□ 0.9
LIG1-214ENST00000597146 KRT26Q7Z3Y9 468 aa20.66■□□□□ 0.9
LIG1-214ENST00000597146 ZNF34Q8IZ26 560 aa20.66■□□□□ 0.9
LIG1-214ENST00000597146 CCDC102AQ96A19 550 aa20.66■□□□□ 0.9
LIG1-214ENST00000597146 RRP7AQ9Y3A4 280 aaKnown RBP20.66■□□□□ 0.9
LIG1-214ENST00000597146 DDX60Q8IY21 1712 aaKnown RBP20.65■□□□□ 0.9
LIG1-214ENST00000597146 SLC10A3P09131 477 aa20.65■□□□□ 0.9
LIG1-214ENST00000597146 MYL6BP14649 208 aa20.65■□□□□ 0.9
LIG1-214ENST00000597146 TBC1D10BQ4KMP7 808 aaPredicted RBP20.65■□□□□ 0.9
LIG1-214ENST00000597146 MPNDQ8N594 471 aa20.65■□□□□ 0.9
LIG1-214ENST00000597146 C2orf69Q8N8R5 385 aa20.65■□□□□ 0.9
LIG1-214ENST00000597146 CSRNP1Q96S65 589 aa20.65■□□□□ 0.9
LIG1-214ENST00000597146 NLRP3Q96P20 1036 aa20.64■□□□□ 0.89
LIG1-214ENST00000597146 SCN9AQ15858 1988 aa20.61■□□□□ 0.89
LIG1-214ENST00000597146 MKI67P46013 3256 aaKnown RBP20.61■□□□□ 0.89
LIG1-214ENST00000597146 PSMD14O00487 310 aa20.61■□□□□ 0.89
LIG1-214ENST00000597146 GIGYF2Q6Y7W6 1299 aaKnown RBP20.61■□□□□ 0.89
LIG1-214ENST00000597146 PPP1R42Q7Z4L9 355 aa20.61■□□□□ 0.89
LIG1-214ENST00000597146 SP8Q8IXZ3 490 aa20.61■□□□□ 0.89
LIG1-214ENST00000597146 TAF7Q15545 349 aaPredicted RBP20.6■□□□□ 0.89
LIG1-214ENST00000597146 RBM26Q5T8P6 1007 aaKnown RBP20.6■□□□□ 0.89
LIG1-214ENST00000597146 DCPSQ96C86 337 aaKnown RBP20.6■□□□□ 0.89
LIG1-214ENST00000597146 COL4A1P02462 1669 aa20.59■□□□□ 0.89
LIG1-214ENST00000597146 RASAL3Q86YV0 1011 aa20.59■□□□□ 0.89
LIG1-214ENST00000597146 DPF2Q92785 391 aa20.59■□□□□ 0.89
LIG1-214ENST00000597146 DBNDD1Q9H9R9 158 aa20.59■□□□□ 0.89
LIG1-214ENST00000597146 ASTN2O75129 1339 aaPredicted RBP20.58■□□□□ 0.89
LIG1-214ENST00000597146 BBOX1O75936 387 aa20.58■□□□□ 0.89
LIG1-214ENST00000597146 PARP10Q53GL7 1025 aa20.58■□□□□ 0.89
LIG1-214ENST00000597146 SLC10A5Q5PT55 438 aa20.58■□□□□ 0.89
LIG1-214ENST00000597146 UTP14AQ9BVJ6 771 aaKnown RBP20.58■□□□□ 0.89
LIG1-214ENST00000597146 PAPPA2Q9BXP8 1791 aa20.58■□□□□ 0.89
LIG1-214ENST00000597146 GCC1Q96CN9 775 aa20.57■□□□□ 0.88
LIG1-214ENST00000597146 GGA3Q9NZ52 723 aa20.57■□□□□ 0.88
LIG1-214ENST00000597146 HTTP42858 3142 aa20.57■□□□□ 0.88
LIG1-214ENST00000597146 U2AF1L5P0DN76 240 aaPredicted RBP20.56■□□□□ 0.88
LIG1-214ENST00000597146 HCLS1P14317 486 aaPredicted RBP20.56■□□□□ 0.88
LIG1-214ENST00000597146 U2AF1Q01081 240 aaKnown RBP eCLIP20.56■□□□□ 0.88
LIG1-214ENST00000597146 HABP4Q5JVS0 413 aaKnown RBP20.56■□□□□ 0.88
LIG1-214ENST00000597146 ZNF296Q8WUU4 475 aaPredicted RBP20.56■□□□□ 0.88
LIG1-214ENST00000597146 CDCA5Q96FF9 252 aa20.56■□□□□ 0.88
LIG1-214ENST00000597146 HDAC9Q9UKV0 1011 aa20.56■□□□□ 0.88
LIG1-214ENST00000597146 RTL9Q8NET4 1388 aa20.56■□□□□ 0.88
LIG1-214ENST00000597146 HTATSF1O43719 755 aaKnown RBP20.55■□□□□ 0.88
LIG1-214ENST00000597146 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
LIG1-214ENST00000597146 GRAPQ13588 217 aa20.55■□□□□ 0.88
LIG1-214ENST00000597146 KIF4BQ2VIQ3 1234 aa20.55■□□□□ 0.88
LIG1-214ENST00000597146 GRAPLQ8TC17 118 aaPredicted RBP20.55■□□□□ 0.88
LIG1-214ENST00000597146 THUMPD2Q9BTF0 503 aaKnown RBP20.55■□□□□ 0.88
LIG1-214ENST00000597146 KCNQ5Q9NR82 932 aa20.55■□□□□ 0.88
LIG1-214ENST00000597146 TBC1D8O95759 1140 aa20.54■□□□□ 0.88
LIG1-214ENST00000597146 PKN2Q16513 984 aaKnown RBP20.54■□□□□ 0.88
LIG1-214ENST00000597146 DDX46Q7L014 1031 aaKnown RBP20.54■□□□□ 0.88
LIG1-214ENST00000597146 SULF1Q8IWU6 871 aa20.54■□□□□ 0.88
LIG1-214ENST00000597146 CFAP53Q96M91 514 aa20.54■□□□□ 0.88
LIG1-214ENST00000597146 PSME4Q14997 1843 aa20.53■□□□□ 0.88
LIG1-214ENST00000597146 RIMBP2O15034 1052 aa20.53■□□□□ 0.88
LIG1-214ENST00000597146 WASHC4Q2M389 1173 aa20.52■□□□□ 0.88
LIG1-214ENST00000597146 CENPFP49454 3210 aa20.51■□□□□ 0.87
LIG1-214ENST00000597146 ECE2O60344 883 aa20.51■□□□□ 0.87
LIG1-214ENST00000597146 RPS12P25398 132 aaKnown RBP20.51■□□□□ 0.87
LIG1-214ENST00000597146 DOK7Q18PE1 504 aa20.51■□□□□ 0.87
LIG1-214ENST00000597146 MOB2Q70IA6 237 aa20.51■□□□□ 0.87
LIG1-214ENST00000597146 LRP10Q7Z4F1 713 aa20.51■□□□□ 0.87
LIG1-214ENST00000597146 REM2Q8IYK8 340 aaPredicted RBP20.51■□□□□ 0.87
LIG1-214ENST00000597146 ZNF428Q96B54 188 aa20.51■□□□□ 0.87
LIG1-214ENST00000597146 NUDCQ9Y266 331 aa20.51■□□□□ 0.87
LIG1-214ENST00000597146 RBBP6Q7Z6E9 1792 aaKnown RBP20.51■□□□□ 0.87
LIG1-214ENST00000597146 ANXA1P04083 346 aa20.5■□□□□ 0.87
LIG1-214ENST00000597146 PROSER3Q2NL68 480 aa20.5■□□□□ 0.87
LIG1-214ENST00000597146 FBXO46Q6PJ61 603 aaPredicted RBP20.5■□□□□ 0.87
LIG1-214ENST00000597146 ERBB4Q15303 1308 aa20.5■□□□□ 0.87
LIG1-214ENST00000597146 ANGEL2Q5VTE6 544 aaKnown RBP20.49■□□□□ 0.87
LIG1-214ENST00000597146 NLRP10Q86W26 655 aa20.49■□□□□ 0.87
LIG1-214ENST00000597146 PNISRQ8TF01 805 aaKnown RBP20.49■□□□□ 0.87
LIG1-214ENST00000597146 NSFL1CQ9UNZ2 370 aaKnown RBP20.49■□□□□ 0.87
LIG1-214ENST00000597146 POLLQ9UGP5 575 aa20.48■□□□□ 0.87
LIG1-214ENST00000597146 BRCA2P51587 3418 aa20.48■□□□□ 0.87
LIG1-214ENST00000597146 C6orf229H3BNL8 230 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms