RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 KIAA2012Q0VF49 1180 aa11.31□□□□□ -0.6
SMG9-202ENST00000594081 CFAP53Q96M91 514 aa11.31□□□□□ -0.6
SMG9-202ENST00000594081 TAF1P21675 1872 aa11.3□□□□□ -0.6
SMG9-202ENST00000594081 HTATSF1O43719 755 aaKnown RBP11.3□□□□□ -0.6
SMG9-202ENST00000594081 MYL6BP14649 208 aa11.3□□□□□ -0.6
SMG9-202ENST00000594081 TNIP1Q15025 636 aa11.3□□□□□ -0.6
SMG9-202ENST00000594081 DLK2Q6UY11 383 aa11.3□□□□□ -0.6
SMG9-202ENST00000594081 DPP8Q6V1X1 898 aaPredicted RBP11.3□□□□□ -0.6
SMG9-202ENST00000594081 PPP4R3CPQ6ZMV5 832 aa11.3□□□□□ -0.6
SMG9-202ENST00000594081 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
SMG9-202ENST00000594081 ZNF34Q8IZ26 560 aa11.3□□□□□ -0.6
SMG9-202ENST00000594081 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
SMG9-202ENST00000594081 MIS18AQ9NYP9 233 aa11.3□□□□□ -0.6
SMG9-202ENST00000594081 RRP7AQ9Y3A4 280 aaKnown RBP11.3□□□□□ -0.6
SMG9-202ENST00000594081 YDJCA8MPS7 323 aa11.29□□□□□ -0.6
SMG9-202ENST00000594081 U2AF1L5P0DN76 240 aaPredicted RBP11.29□□□□□ -0.6
SMG9-202ENST00000594081 U2AF1Q01081 240 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMG9-202ENST00000594081 TAF7Q15545 349 aaPredicted RBP11.29□□□□□ -0.6
SMG9-202ENST00000594081 PARP10Q53GL7 1025 aa11.29□□□□□ -0.6
SMG9-202ENST00000594081 RGMBQ6NW40 437 aa11.29□□□□□ -0.6
SMG9-202ENST00000594081 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
SMG9-202ENST00000594081 PPP1R42Q7Z4L9 355 aa11.29□□□□□ -0.6
SMG9-202ENST00000594081 USP48Q86UV5 1035 aa11.29□□□□□ -0.6
SMG9-202ENST00000594081 PCGF6Q9BYE7 350 aa11.29□□□□□ -0.6
SMG9-202ENST00000594081 CNOT7Q9UIV1 285 aaKnown RBP11.29□□□□□ -0.6
SMG9-202ENST00000594081 NUDCQ9Y266 331 aa11.29□□□□□ -0.6
SMG9-202ENST00000594081 MPNDQ8N594 471 aa11.28□□□□□ -0.6
SMG9-202ENST00000594081 GBA2Q9HCG7 927 aaPredicted RBP11.28□□□□□ -0.6
SMG9-202ENST00000594081 RNF186Q9NXI6 227 aa11.28□□□□□ -0.6
SMG9-202ENST00000594081 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
SMG9-202ENST00000594081 ADM5C9JUS6 153 aa11.27□□□□□ -0.61
SMG9-202ENST00000594081 H7C1D1 291 aa11.27□□□□□ -0.61
SMG9-202ENST00000594081 TRPA1O75762 1119 aa11.27□□□□□ -0.61
SMG9-202ENST00000594081 KIF23Q02241 960 aaPredicted RBP11.27□□□□□ -0.61
SMG9-202ENST00000594081 KRT26Q7Z3Y9 468 aa11.27□□□□□ -0.61
SMG9-202ENST00000594081 CTU1Q7Z7A3 348 aaKnown RBP11.27□□□□□ -0.61
SMG9-202ENST00000594081 SP8Q8IXZ3 490 aa11.27□□□□□ -0.61
SMG9-202ENST00000594081 UTP14AQ9BVJ6 771 aaKnown RBP11.27□□□□□ -0.61
SMG9-202ENST00000594081 ZBTB12Q9Y330 459 aaPredicted RBP11.27□□□□□ -0.61
SMG9-202ENST00000594081 EGFRP00533 1210 aa11.26□□□□□ -0.61
SMG9-202ENST00000594081 SLC10A3P09131 477 aa11.26□□□□□ -0.61
SMG9-202ENST00000594081 ZNF157P51786 506 aaPredicted RBP11.26□□□□□ -0.61
SMG9-202ENST00000594081 EIF4A1P60842 406 aaKnown RBP11.26□□□□□ -0.61
SMG9-202ENST00000594081 TBC1D10BQ4KMP7 808 aaPredicted RBP11.26□□□□□ -0.61
SMG9-202ENST00000594081 SAMD7Q7Z3H4 446 aa11.26□□□□□ -0.61
SMG9-202ENST00000594081 C2orf69Q8N8R5 385 aa11.26□□□□□ -0.61
SMG9-202ENST00000594081 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
SMG9-202ENST00000594081 CCDC102AQ96A19 550 aa11.26□□□□□ -0.61
SMG9-202ENST00000594081 ERBB4Q15303 1308 aa11.26□□□□□ -0.61
SMG9-202ENST00000594081 COL4A1P02462 1669 aa11.26□□□□□ -0.61
SMG9-202ENST00000594081 PAPPA2Q9BXP8 1791 aa11.26□□□□□ -0.61
SMG9-202ENST00000594081 PSMD14O00487 310 aa11.25□□□□□ -0.61
SMG9-202ENST00000594081 BBOX1O75936 387 aa11.25□□□□□ -0.61
SMG9-202ENST00000594081 GRAPQ13588 217 aa11.25□□□□□ -0.61
SMG9-202ENST00000594081 SLC10A5Q5PT55 438 aa11.25□□□□□ -0.61
SMG9-202ENST00000594081 GRAPLQ8TC17 118 aaPredicted RBP11.25□□□□□ -0.61
SMG9-202ENST00000594081 DPF2Q92785 391 aa11.25□□□□□ -0.61
SMG9-202ENST00000594081 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
SMG9-202ENST00000594081 DDX46Q7L014 1031 aaKnown RBP11.24□□□□□ -0.61
SMG9-202ENST00000594081 LRP10Q7Z4F1 713 aa11.24□□□□□ -0.61
SMG9-202ENST00000594081 DCPSQ96C86 337 aaKnown RBP11.24□□□□□ -0.61
SMG9-202ENST00000594081 DBNDD1Q9H9R9 158 aa11.24□□□□□ -0.61
SMG9-202ENST00000594081 GGA3Q9NZ52 723 aa11.24□□□□□ -0.61
SMG9-202ENST00000594081 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
SMG9-202ENST00000594081 SCN9AQ15858 1988 aa11.24□□□□□ -0.61
SMG9-202ENST00000594081 PSME4Q14997 1843 aa11.23□□□□□ -0.61
SMG9-202ENST00000594081 KIF4BQ2VIQ3 1234 aa11.23□□□□□ -0.61
SMG9-202ENST00000594081 RASAL3Q86YV0 1011 aa11.23□□□□□ -0.61
SMG9-202ENST00000594081 CSRNP1Q96S65 589 aa11.23□□□□□ -0.61
SMG9-202ENST00000594081 THUMPD2Q9BTF0 503 aaKnown RBP11.23□□□□□ -0.61
SMG9-202ENST00000594081 RTL9Q8NET4 1388 aa11.23□□□□□ -0.61
SMG9-202ENST00000594081 RPS12P25398 132 aaKnown RBP11.22□□□□□ -0.61
SMG9-202ENST00000594081 PPP2R1AP30153 589 aa11.22□□□□□ -0.61
SMG9-202ENST00000594081 WASHC4Q2M389 1173 aa11.22□□□□□ -0.61
SMG9-202ENST00000594081 PROSER3Q2NL68 480 aa11.22□□□□□ -0.61
SMG9-202ENST00000594081 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
SMG9-202ENST00000594081 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
SMG9-202ENST00000594081 NLRP10Q86W26 655 aa11.22□□□□□ -0.61
SMG9-202ENST00000594081 SULF1Q8IWU6 871 aa11.22□□□□□ -0.61
SMG9-202ENST00000594081 ASTN2O75129 1339 aaPredicted RBP11.21□□□□□ -0.61
SMG9-202ENST00000594081 SH3TC1Q8TE82 1336 aa11.21□□□□□ -0.61
SMG9-202ENST00000594081 ECE2O60344 883 aa11.21□□□□□ -0.61
SMG9-202ENST00000594081 ANXA1P04083 346 aa11.21□□□□□ -0.61
SMG9-202ENST00000594081 PDIA6Q15084 440 aa11.21□□□□□ -0.61
SMG9-202ENST00000594081 HSP90AB3PQ58FF7 597 aa11.21□□□□□ -0.61
SMG9-202ENST00000594081 CDCA5Q96FF9 252 aa11.21□□□□□ -0.61
SMG9-202ENST00000594081 ZNF609O15014 1411 aa11.2□□□□□ -0.62
SMG9-202ENST00000594081 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
SMG9-202ENST00000594081 NEFMP07197 916 aa11.2□□□□□ -0.62
SMG9-202ENST00000594081 PKN2Q16513 984 aaKnown RBP11.2□□□□□ -0.62
SMG9-202ENST00000594081 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
SMG9-202ENST00000594081 TRMT112Q9UI30 125 aaKnown RBP11.2□□□□□ -0.62
SMG9-202ENST00000594081 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
SMG9-202ENST00000594081 ZNF296Q8WUU4 475 aaPredicted RBP11.19□□□□□ -0.62
SMG9-202ENST00000594081 GCC1Q96CN9 775 aa11.19□□□□□ -0.62
SMG9-202ENST00000594081 KCNQ5Q9NR82 932 aa11.19□□□□□ -0.62
SMG9-202ENST00000594081 TSPYL4Q9UJ04 414 aa11.19□□□□□ -0.62
SMG9-202ENST00000594081 HDAC9Q9UKV0 1011 aa11.19□□□□□ -0.62
SMG9-202ENST00000594081 NSFL1CQ9UNZ2 370 aaKnown RBP11.19□□□□□ -0.62
SMG9-202ENST00000594081 C6orf229H3BNL8 230 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms