RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 SLC27A2O14975 620 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 KCNQ3O43525 872 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 MNS1Q8NEH6 495 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 SNW1Q13573 536 aaKnown RBP16.72■□□□□ 0.27
CIRBP-242ENST00000593093 NOL10Q9BSC4 688 aaKnown RBP16.72■□□□□ 0.27
CIRBP-242ENST00000593093 CHGBP05060 677 aa16.72■□□□□ 0.27
CIRBP-242ENST00000593093 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
CIRBP-242ENST00000593093 FSIP1Q8NA03 581 aa16.71■□□□□ 0.27
CIRBP-242ENST00000593093 IL17REQ8NFR9 667 aa16.71■□□□□ 0.27
CIRBP-242ENST00000593093 TMEM131LA2VDJ0 1609 aa16.71■□□□□ 0.27
CIRBP-242ENST00000593093 NRDCO43847 1150 aa16.71■□□□□ 0.27
CIRBP-242ENST00000593093 SLU7O95391 586 aaKnown RBP16.71■□□□□ 0.27
CIRBP-242ENST00000593093 TERF2Q15554 542 aa16.71■□□□□ 0.27
CIRBP-242ENST00000593093 TIGD1Q96MW7 591 aa16.71■□□□□ 0.27
CIRBP-242ENST00000593093 PRR36Q9H6K5 1346 aa16.71■□□□□ 0.27
CIRBP-242ENST00000593093 URI1O94763 535 aaPredicted RBP16.71■□□□□ 0.27
CIRBP-242ENST00000593093 SLFN14P0C7P3 912 aa16.71■□□□□ 0.27
CIRBP-242ENST00000593093 SKIDA1Q1XH10 827 aa16.7■□□□□ 0.26
CIRBP-242ENST00000593093 ARHGAP29Q52LW3 1261 aa16.7■□□□□ 0.26
CIRBP-242ENST00000593093 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
CIRBP-242ENST00000593093 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
CIRBP-242ENST00000593093 DNAI1Q9UI46 699 aa16.7■□□□□ 0.26
CIRBP-242ENST00000593093 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
CIRBP-242ENST00000593093 ARHGEF28Q8N1W1 1705 aaKnown RBP16.7■□□□□ 0.26
CIRBP-242ENST00000593093 GABPB1Q06547 395 aaPredicted RBP16.7■□□□□ 0.26
CIRBP-242ENST00000593093 NCOA5Q9HCD5 579 aaKnown RBP16.7■□□□□ 0.26
CIRBP-242ENST00000593093 MYO3AQ8NEV4 1616 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 ROBO2Q9HCK4 1378 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 POLR3DP05423 398 aaPredicted RBP16.69■□□□□ 0.26
CIRBP-242ENST00000593093 OTUD7BQ6GQQ9 843 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 Q6ZUG5 572 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 EVI5LQ96CN4 794 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 ZSWIM4Q9H7M6 989 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 A0A1B0GVL5 298 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 MPRIPQ6WCQ1 1025 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 CEP57L1Q8IYX8 460 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 MAP3K2Q9Y2U5 619 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 UBXN4Q92575 508 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 EPC1Q9H2F5 836 aa16.69■□□□□ 0.26
CIRBP-242ENST00000593093 PLA2G4DQ86XP0 818 aa16.68■□□□□ 0.26
CIRBP-242ENST00000593093 CFAP45Q9UL16 551 aa16.68■□□□□ 0.26
CIRBP-242ENST00000593093 ZC3H13Q5T200 1668 aaKnown RBP16.68■□□□□ 0.26
CIRBP-242ENST00000593093 LMOD1P29536 600 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-242ENST00000593093 STX1AQ16623 288 aa16.68■□□□□ 0.26
CIRBP-242ENST00000593093 ZNF589Q86UQ0 364 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-242ENST00000593093 TDRD7Q8NHU6 1098 aaKnown RBP16.68■□□□□ 0.26
CIRBP-242ENST00000593093 SEC62Q99442 399 aaKnown RBP16.68■□□□□ 0.26
CIRBP-242ENST00000593093 LGR6Q9HBX8 967 aa16.68■□□□□ 0.26
CIRBP-242ENST00000593093 IFNKQ9P0W0 207 aa16.68■□□□□ 0.26
CIRBP-242ENST00000593093 SFPQP23246 707 aaKnown RBP eCLIP16.67■□□□□ 0.26
CIRBP-242ENST00000593093 GOLGA8FQ08AF8 430 aa16.67■□□□□ 0.26
CIRBP-242ENST00000593093 GOLGA8DPQ0D2H9 430 aa16.67■□□□□ 0.26
CIRBP-242ENST00000593093 ANKRD1Q15327 319 aa16.67■□□□□ 0.26
CIRBP-242ENST00000593093 PDILTQ8N807 584 aa16.67■□□□□ 0.26
CIRBP-242ENST00000593093 LRRN4CLQ8ND94 238 aa16.67■□□□□ 0.26
CIRBP-242ENST00000593093 NEK11Q8NG66 645 aa16.67■□□□□ 0.26
CIRBP-242ENST00000593093 CCDC34Q96HJ3 373 aa16.67■□□□□ 0.26
CIRBP-242ENST00000593093 BRD2P25440 801 aaKnown RBP16.67■□□□□ 0.26
CIRBP-242ENST00000593093 TEX2Q8IWB9 1127 aa16.67■□□□□ 0.26
CIRBP-242ENST00000593093 CPSF1Q10570 1443 aaKnown RBP16.67■□□□□ 0.26
CIRBP-242ENST00000593093 TMEM2Q9UHN6 1383 aa16.67■□□□□ 0.26
CIRBP-242ENST00000593093 MYL6BP14649 208 aa16.66■□□□□ 0.26
CIRBP-242ENST00000593093 NECTIN1Q15223 517 aa16.66■□□□□ 0.26
CIRBP-242ENST00000593093 EAF2Q96CJ1 260 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-242ENST00000593093 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
CIRBP-242ENST00000593093 RPS6KB1P23443 525 aa16.66■□□□□ 0.26
CIRBP-242ENST00000593093 PIP4K2AP48426 406 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-242ENST00000593093 NEUROD6Q96NK8 337 aa16.66■□□□□ 0.26
CIRBP-242ENST00000593093 ERO1AQ96HE7 468 aa16.66■□□□□ 0.26
CIRBP-242ENST00000593093 ANO10Q9NW15 660 aa16.66■□□□□ 0.26
CIRBP-242ENST00000593093 SEC31AO94979 1220 aaKnown RBP16.65■□□□□ 0.26
CIRBP-242ENST00000593093 SLFNL1Q499Z3 407 aa16.65■□□□□ 0.26
CIRBP-242ENST00000593093 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
CIRBP-242ENST00000593093 RGS22Q8NE09 1264 aa16.65■□□□□ 0.26
CIRBP-242ENST00000593093 NEK1Q96PY6 1258 aa16.65■□□□□ 0.26
CIRBP-242ENST00000593093 ZCCHC17Q9NP64 241 aaKnown RBP16.65■□□□□ 0.26
CIRBP-242ENST00000593093 APOBRQ0VD83 1088 aa16.65■□□□□ 0.26
CIRBP-242ENST00000593093 STK38Q15208 465 aa16.65■□□□□ 0.26
CIRBP-242ENST00000593093 TMCO3Q6UWJ1 677 aa16.65■□□□□ 0.26
CIRBP-242ENST00000593093 BMS1Q14692 1282 aaKnown RBP16.65■□□□□ 0.26
CIRBP-242ENST00000593093 USP28Q96RU2 1077 aa16.65■□□□□ 0.26
CIRBP-242ENST00000593093 MORC2Q9Y6X9 1032 aaPredicted RBP16.65■□□□□ 0.26
CIRBP-242ENST00000593093 MAP2P11137 1827 aaKnown RBP16.65■□□□□ 0.26
CIRBP-242ENST00000593093 USP32Q8NFA0 1604 aa16.64■□□□□ 0.26
CIRBP-242ENST00000593093 KCNA6P17658 529 aa16.64■□□□□ 0.25
CIRBP-242ENST00000593093 TEX35Q5T0J7 233 aa16.64■□□□□ 0.25
CIRBP-242ENST00000593093 ABTB2Q8N961 1025 aa16.64■□□□□ 0.25
CIRBP-242ENST00000593093 RBM6P78332 1123 aaKnown RBP16.64■□□□□ 0.25
CIRBP-242ENST00000593093 NAT10Q9H0A0 1025 aaKnown RBP16.64■□□□□ 0.25
CIRBP-242ENST00000593093 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.64■□□□□ 0.25
CIRBP-242ENST00000593093 BTBD11A6QL63 1104 aa16.63■□□□□ 0.25
CIRBP-242ENST00000593093 SERPINC1P01008 464 aa16.63■□□□□ 0.25
CIRBP-242ENST00000593093 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
CIRBP-242ENST00000593093 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-242ENST00000593093 AOX1Q06278 1338 aa16.63■□□□□ 0.25
CIRBP-242ENST00000593093 CDK12Q9NYV4 1490 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-242ENST00000593093 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-242ENST00000593093 XPO4Q9C0E2 1151 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms