RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 U2AF1Q01081 240 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMCO4P1-201ENST00000592909 PARP10Q53GL7 1025 aa13.48□□□□□ -0.25
SMCO4P1-201ENST00000592909 RGMBQ6NW40 437 aa13.48□□□□□ -0.25
SMCO4P1-201ENST00000592909 DPP8Q6V1X1 898 aaPredicted RBP13.48□□□□□ -0.25
SMCO4P1-201ENST00000592909 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
SMCO4P1-201ENST00000592909 CCDC102AQ96A19 550 aa13.48□□□□□ -0.25
SMCO4P1-201ENST00000592909 ABCC4O15439 1325 aa13.47□□□□□ -0.25
SMCO4P1-201ENST00000592909 SOX10P56693 466 aa13.47□□□□□ -0.25
SMCO4P1-201ENST00000592909 PRPF38BQ5VTL8 546 aaKnown RBP13.47□□□□□ -0.25
SMCO4P1-201ENST00000592909 MPNDQ8N594 471 aa13.47□□□□□ -0.25
SMCO4P1-201ENST00000592909 PCGF6Q9BYE7 350 aa13.47□□□□□ -0.25
SMCO4P1-201ENST00000592909 YDJCA8MPS7 323 aa13.46□□□□□ -0.25
SMCO4P1-201ENST00000592909 MYL6BP14649 208 aa13.46□□□□□ -0.25
SMCO4P1-201ENST00000592909 EIF4A1P60842 406 aaKnown RBP13.46□□□□□ -0.25
SMCO4P1-201ENST00000592909 KIF23Q02241 960 aaPredicted RBP13.46□□□□□ -0.25
SMCO4P1-201ENST00000592909 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.25
SMCO4P1-201ENST00000592909 MICALL2Q8IY33 904 aa13.46□□□□□ -0.25
SMCO4P1-201ENST00000592909 DPF2Q92785 391 aa13.46□□□□□ -0.25
SMCO4P1-201ENST00000592909 UTP14AQ9BVJ6 771 aaKnown RBP13.46□□□□□ -0.25
SMCO4P1-201ENST00000592909 ERBB4Q15303 1308 aa13.45□□□□□ -0.26
SMCO4P1-201ENST00000592909 SHTN1A0MZ66 631 aa13.45□□□□□ -0.26
SMCO4P1-201ENST00000592909 C2orf69Q8N8R5 385 aa13.45□□□□□ -0.26
SMCO4P1-201ENST00000592909 GBA2Q9HCG7 927 aaPredicted RBP13.45□□□□□ -0.26
SMCO4P1-201ENST00000592909 RNF186Q9NXI6 227 aa13.45□□□□□ -0.26
SMCO4P1-201ENST00000592909 TRPA1O75762 1119 aa13.44□□□□□ -0.26
SMCO4P1-201ENST00000592909 DLK2Q6UY11 383 aa13.44□□□□□ -0.26
SMCO4P1-201ENST00000592909 KRT26Q7Z3Y9 468 aa13.44□□□□□ -0.26
SMCO4P1-201ENST00000592909 ZNF157P51786 506 aaPredicted RBP13.43□□□□□ -0.26
SMCO4P1-201ENST00000592909 SAMD7Q7Z3H4 446 aa13.43□□□□□ -0.26
SMCO4P1-201ENST00000592909 CTU1Q7Z7A3 348 aaKnown RBP13.43□□□□□ -0.26
SMCO4P1-201ENST00000592909 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
SMCO4P1-201ENST00000592909 NUP98P52948 1817 aa13.43□□□□□ -0.26
SMCO4P1-201ENST00000592909 SLC10A3P09131 477 aa13.42□□□□□ -0.26
SMCO4P1-201ENST00000592909 GRAPQ13588 217 aa13.42□□□□□ -0.26
SMCO4P1-201ENST00000592909 DDX46Q7L014 1031 aaKnown RBP13.42□□□□□ -0.26
SMCO4P1-201ENST00000592909 TMC4Q7Z404 712 aa13.42□□□□□ -0.26
SMCO4P1-201ENST00000592909 LRP10Q7Z4F1 713 aa13.42□□□□□ -0.26
SMCO4P1-201ENST00000592909 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
SMCO4P1-201ENST00000592909 GRAPLQ8TC17 118 aaPredicted RBP13.42□□□□□ -0.26
SMCO4P1-201ENST00000592909 CSRNP1Q96S65 589 aa13.42□□□□□ -0.26
SMCO4P1-201ENST00000592909 TNRC18O15417 2968 aaPredicted RBP13.42□□□□□ -0.26
SMCO4P1-201ENST00000592909 PSMD14O00487 310 aa13.41□□□□□ -0.26
SMCO4P1-201ENST00000592909 EGFRP00533 1210 aa13.41□□□□□ -0.26
SMCO4P1-201ENST00000592909 RPS12P25398 132 aaKnown RBP13.41□□□□□ -0.26
SMCO4P1-201ENST00000592909 TBC1D10BQ4KMP7 808 aaPredicted RBP13.41□□□□□ -0.26
SMCO4P1-201ENST00000592909 DCPSQ96C86 337 aaKnown RBP13.41□□□□□ -0.26
SMCO4P1-201ENST00000592909 LAMB4A4D0S4 1761 aa13.4□□□□□ -0.26
SMCO4P1-201ENST00000592909 ADM5C9JUS6 153 aa13.4□□□□□ -0.26
SMCO4P1-201ENST00000592909 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
SMCO4P1-201ENST00000592909 PPP2R1AP30153 589 aa13.4□□□□□ -0.26
SMCO4P1-201ENST00000592909 PDIA6Q15084 440 aa13.4□□□□□ -0.26
SMCO4P1-201ENST00000592909 PKN2Q16513 984 aaKnown RBP13.4□□□□□ -0.26
SMCO4P1-201ENST00000592909 WASHC4Q2M389 1173 aa13.39□□□□□ -0.27
SMCO4P1-201ENST00000592909 HSP90AB3PQ58FF7 597 aa13.39□□□□□ -0.27
SMCO4P1-201ENST00000592909 NLRP10Q86W26 655 aa13.39□□□□□ -0.27
SMCO4P1-201ENST00000592909 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
SMCO4P1-201ENST00000592909 THUMPD2Q9BTF0 503 aaKnown RBP13.38□□□□□ -0.27
SMCO4P1-201ENST00000592909 DBNDD1Q9H9R9 158 aa13.38□□□□□ -0.27
SMCO4P1-201ENST00000592909 SH3TC1Q8TE82 1336 aa13.38□□□□□ -0.27
SMCO4P1-201ENST00000592909 NEFMP07197 916 aa13.37□□□□□ -0.27
SMCO4P1-201ENST00000592909 RBM26Q5T8P6 1007 aaKnown RBP13.37□□□□□ -0.27
SMCO4P1-201ENST00000592909 RASAL3Q86YV0 1011 aa13.37□□□□□ -0.27
SMCO4P1-201ENST00000592909 SULF1Q8IWU6 871 aa13.37□□□□□ -0.27
SMCO4P1-201ENST00000592909 TRMT112Q9UI30 125 aaKnown RBP13.37□□□□□ -0.27
SMCO4P1-201ENST00000592909 NSFL1CQ9UNZ2 370 aaKnown RBP13.37□□□□□ -0.27
SMCO4P1-201ENST00000592909 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
SMCO4P1-201ENST00000592909 RTL9Q8NET4 1388 aa13.36□□□□□ -0.27
SMCO4P1-201ENST00000592909 FKBP1BP68106 108 aa13.36□□□□□ -0.27
SMCO4P1-201ENST00000592909 TCIRG1Q13488 830 aa13.36□□□□□ -0.27
SMCO4P1-201ENST00000592909 NFE2L2Q16236 605 aa13.36□□□□□ -0.27
SMCO4P1-201ENST00000592909 PROSER3Q2NL68 480 aa13.36□□□□□ -0.27
SMCO4P1-201ENST00000592909 KIF4BQ2VIQ3 1234 aa13.36□□□□□ -0.27
SMCO4P1-201ENST00000592909 CDCA5Q96FF9 252 aa13.36□□□□□ -0.27
SMCO4P1-201ENST00000592909 PLEKHF1Q96S99 279 aa13.36□□□□□ -0.27
SMCO4P1-201ENST00000592909 POLLQ9UGP5 575 aa13.36□□□□□ -0.27
SMCO4P1-201ENST00000592909 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 C6orf229H3BNL8 230 aa13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 RIMBP2O15034 1052 aa13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 ECE2O60344 883 aa13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 VIL1P09327 827 aaKnown RBP13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 EIF2S2P20042 333 aaKnown RBP13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 EYA3Q99504 573 aa13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 KCNQ5Q9NR82 932 aa13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 GGA3Q9NZ52 723 aa13.35□□□□□ -0.27
SMCO4P1-201ENST00000592909 ANXA1P04083 346 aa13.34□□□□□ -0.27
SMCO4P1-201ENST00000592909 GPSM2P81274 684 aa13.34□□□□□ -0.27
SMCO4P1-201ENST00000592909 SF3B3Q15393 1217 aaKnown RBP13.34□□□□□ -0.27
SMCO4P1-201ENST00000592909 NOM1Q5C9Z4 860 aaKnown RBP13.34□□□□□ -0.27
SMCO4P1-201ENST00000592909 ZNF296Q8WUU4 475 aaPredicted RBP13.34□□□□□ -0.27
SMCO4P1-201ENST00000592909 CELF1Q92879 486 aaKnown RBP13.34□□□□□ -0.27
SMCO4P1-201ENST00000592909 TSPYL4Q9UJ04 414 aa13.34□□□□□ -0.27
SMCO4P1-201ENST00000592909 HDAC9Q9UKV0 1011 aa13.34□□□□□ -0.27
SMCO4P1-201ENST00000592909 ZNF280AP59817 542 aaPredicted RBP13.33□□□□□ -0.28
SMCO4P1-201ENST00000592909 DOK7Q18PE1 504 aa13.33□□□□□ -0.28
SMCO4P1-201ENST00000592909 XAGE3Q8WTP9 111 aa13.33□□□□□ -0.28
SMCO4P1-201ENST00000592909 BABAM1Q9NWV8 329 aa13.33□□□□□ -0.28
SMCO4P1-201ENST00000592909 ASTN2O75129 1339 aaPredicted RBP13.33□□□□□ -0.28
SMCO4P1-201ENST00000592909 TBC1D8O95759 1140 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms