RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 KIF13BQ9NQT8 1826 aa18.96■□□□□ 0.63
ATG4D-211ENST00000589753 MTX1Q13505 466 aa18.96■□□□□ 0.63
ATG4D-211ENST00000589753 CRY2Q49AN0 593 aa18.96■□□□□ 0.63
ATG4D-211ENST00000589753 CEP85Q6P2H3 762 aa18.96■□□□□ 0.63
ATG4D-211ENST00000589753 RPAP2Q8IXW5 612 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-211ENST00000589753 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
ATG4D-211ENST00000589753 ATP8B2P98198 1209 aa18.95■□□□□ 0.62
ATG4D-211ENST00000589753 FAM161AQ3B820 660 aa18.95■□□□□ 0.62
ATG4D-211ENST00000589753 KLHL34Q8N239 644 aa18.95■□□□□ 0.62
ATG4D-211ENST00000589753 RPGRQ92834 1020 aaKnown RBP18.95■□□□□ 0.62
ATG4D-211ENST00000589753 GREM2Q9H772 168 aa18.95■□□□□ 0.62
ATG4D-211ENST00000589753 PPP1R1BQ9UD71 204 aaPredicted RBP18.95■□□□□ 0.62
ATG4D-211ENST00000589753 CD2APQ9Y5K6 639 aa18.95■□□□□ 0.62
ATG4D-211ENST00000589753 RTL9Q8NET4 1388 aa18.94■□□□□ 0.62
ATG4D-211ENST00000589753 H0YIN7 160 aa18.94■□□□□ 0.62
ATG4D-211ENST00000589753 SRGAP3O43295 1099 aa18.94■□□□□ 0.62
ATG4D-211ENST00000589753 C2CD5Q86YS7 1000 aa18.94■□□□□ 0.62
ATG4D-211ENST00000589753 PCDHB15Q9Y5E8 787 aa18.94■□□□□ 0.62
ATG4D-211ENST00000589753 PNMA6EA0A0J9YXQ4 647 aa18.93■□□□□ 0.62
ATG4D-211ENST00000589753 ANKRD18BA2A2Z9 1011 aa18.93■□□□□ 0.62
ATG4D-211ENST00000589753 SRGNP10124 158 aa18.93■□□□□ 0.62
ATG4D-211ENST00000589753 ITGA6P23229 1130 aa18.93■□□□□ 0.62
ATG4D-211ENST00000589753 TGFB2P61812 414 aa18.93■□□□□ 0.62
ATG4D-211ENST00000589753 IFIT5Q13325 482 aaKnown RBP18.93■□□□□ 0.62
ATG4D-211ENST00000589753 CCDC57Q2TAC2 916 aa18.93■□□□□ 0.62
ATG4D-211ENST00000589753 ERICH6BQ5W0A0 696 aa18.93■□□□□ 0.62
ATG4D-211ENST00000589753 DDX46Q7L014 1031 aaKnown RBP18.93■□□□□ 0.62
ATG4D-211ENST00000589753 RBM17Q96I25 401 aaKnown RBP18.93■□□□□ 0.62
ATG4D-211ENST00000589753 COL11A2P13942 1736 aaPredicted RBP18.92■□□□□ 0.62
ATG4D-211ENST00000589753 NPR1P16066 1061 aa18.92■□□□□ 0.62
ATG4D-211ENST00000589753 MASTLQ96GX5 879 aa18.92■□□□□ 0.62
ATG4D-211ENST00000589753 SEC31BQ9NQW1 1179 aa18.92■□□□□ 0.62
ATG4D-211ENST00000589753 HMMRO75330 724 aa18.91■□□□□ 0.62
ATG4D-211ENST00000589753 CHRNA5P30532 468 aa18.91■□□□□ 0.62
ATG4D-211ENST00000589753 HOXA10P31260 410 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-211ENST00000589753 POLA2Q14181 598 aa18.91■□□□□ 0.62
ATG4D-211ENST00000589753 SIRT2Q8IXJ6 389 aa18.91■□□□□ 0.62
ATG4D-211ENST00000589753 SSH3Q8TE77 659 aa18.91■□□□□ 0.62
ATG4D-211ENST00000589753 CDC5LQ99459 802 aaKnown RBP18.91■□□□□ 0.62
ATG4D-211ENST00000589753 LRP5O75197 1615 aa18.9■□□□□ 0.62
ATG4D-211ENST00000589753 DPEP1P16444 411 aa18.9■□□□□ 0.62
ATG4D-211ENST00000589753 RFX5P48382 616 aaPredicted RBP18.9■□□□□ 0.62
ATG4D-211ENST00000589753 TAF7LQ5H9L4 462 aa18.9■□□□□ 0.62
ATG4D-211ENST00000589753 STYK1Q6J9G0 422 aa18.9■□□□□ 0.62
ATG4D-211ENST00000589753 ZNF622Q969S3 477 aaKnown RBP eCLIP18.9■□□□□ 0.62
ATG4D-211ENST00000589753 CRAMP1Q96RY5 1269 aa18.9■□□□□ 0.62
ATG4D-211ENST00000589753 KIAA1551Q9HCM1 1747 aa18.89■□□□□ 0.61
ATG4D-211ENST00000589753 A0A0G2JLW4 131 aa18.89■□□□□ 0.61
ATG4D-211ENST00000589753 ALDH1B1P30837 517 aa18.89■□□□□ 0.61
ATG4D-211ENST00000589753 GRAPQ13588 217 aa18.89■□□□□ 0.61
ATG4D-211ENST00000589753 GRAPLQ8TC17 118 aaPredicted RBP18.89■□□□□ 0.61
ATG4D-211ENST00000589753 FHDC1Q9C0D6 1143 aaPredicted RBP18.89■□□□□ 0.61
ATG4D-211ENST00000589753 DLEC1Q9Y238 1755 aa18.88■□□□□ 0.61
ATG4D-211ENST00000589753 PTPN12Q05209 780 aaKnown RBP18.88■□□□□ 0.61
ATG4D-211ENST00000589753 ANKRD18AQ8IVF6 992 aa18.88■□□□□ 0.61
ATG4D-211ENST00000589753 KLHDC4Q8TBB5 520 aa18.88■□□□□ 0.61
ATG4D-211ENST00000589753 CELF1Q92879 486 aaKnown RBP18.88■□□□□ 0.61
ATG4D-211ENST00000589753 ZNF594Q96JF6 807 aaPredicted RBP18.88■□□□□ 0.61
ATG4D-211ENST00000589753 IGHMBP2P38935 993 aaKnown RBP18.87■□□□□ 0.61
ATG4D-211ENST00000589753 RPS8P62241 208 aaKnown RBP18.87■□□□□ 0.61
ATG4D-211ENST00000589753 CNKSR1Q969H4 720 aa18.87■□□□□ 0.61
ATG4D-211ENST00000589753 COPRSQ9NQ92 184 aa18.87■□□□□ 0.61
ATG4D-211ENST00000589753 PA2G4Q9UQ80 394 aaKnown RBP18.87■□□□□ 0.61
ATG4D-211ENST00000589753 COL4A1P02462 1669 aa18.86■□□□□ 0.61
ATG4D-211ENST00000589753 KCNA3P22001 575 aa18.86■□□□□ 0.61
ATG4D-211ENST00000589753 HDAC1Q13547 482 aaPredicted RBP18.86■□□□□ 0.61
ATG4D-211ENST00000589753 NLGN2Q8NFZ4 835 aa18.86■□□□□ 0.61
ATG4D-211ENST00000589753 MPHOSPH8Q99549 860 aa18.86■□□□□ 0.61
ATG4D-211ENST00000589753 RWDD1Q9H446 243 aaPredicted RBP18.86■□□□□ 0.61
ATG4D-211ENST00000589753 TAF1P21675 1872 aa18.86■□□□□ 0.61
ATG4D-211ENST00000589753 BBOX1O75936 387 aa18.85■□□□□ 0.61
ATG4D-211ENST00000589753 LDHAL6AQ6ZMR3 332 aa18.85■□□□□ 0.61
ATG4D-211ENST00000589753 PIM2Q9P1W9 311 aa18.85■□□□□ 0.61
ATG4D-211ENST00000589753 PPEF1O14829 653 aaPredicted RBP18.84■□□□□ 0.61
ATG4D-211ENST00000589753 SURF6O75683 361 aaKnown RBP18.84■□□□□ 0.61
ATG4D-211ENST00000589753 TTLL6Q8N841 843 aa18.84■□□□□ 0.61
ATG4D-211ENST00000589753 SYT17Q9BSW7 474 aa18.84■□□□□ 0.61
ATG4D-211ENST00000589753 SIL1Q9H173 461 aa18.84■□□□□ 0.61
ATG4D-211ENST00000589753 CNNM1Q9NRU3 951 aa18.84■□□□□ 0.61
ATG4D-211ENST00000589753 BSDC1Q9NW68 430 aaPredicted RBP18.84■□□□□ 0.61
ATG4D-211ENST00000589753 FBXO3Q9UK99 471 aa18.84■□□□□ 0.61
ATG4D-211ENST00000589753 SPEF2Q9C093 1822 aa18.84■□□□□ 0.61
ATG4D-211ENST00000589753 EYA2O00167 538 aa18.83■□□□□ 0.6
ATG4D-211ENST00000589753 IGHDP01880 384 aa18.83■□□□□ 0.6
ATG4D-211ENST00000589753 PRPF40BQ6NWY9 871 aaKnown RBP18.83■□□□□ 0.6
ATG4D-211ENST00000589753 TMC4Q7Z404 712 aa18.83■□□□□ 0.6
ATG4D-211ENST00000589753 PUS3Q9BZE2 481 aaKnown RBP18.83■□□□□ 0.6
ATG4D-211ENST00000589753 PPP4R2Q9NY27 417 aa18.83■□□□□ 0.6
ATG4D-211ENST00000589753 NOP58Q9Y2X3 529 aaKnown RBP18.83■□□□□ 0.6
ATG4D-211ENST00000589753 CIAO1O76071 339 aa18.82■□□□□ 0.6
ATG4D-211ENST00000589753 G3BP1Q13283 466 aaKnown RBP eCLIP18.82■□□□□ 0.6
ATG4D-211ENST00000589753 LRRC24Q50LG9 513 aa18.82■□□□□ 0.6
ATG4D-211ENST00000589753 HSP90AB4PQ58FF6 505 aa18.82■□□□□ 0.6
ATG4D-211ENST00000589753 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
ATG4D-211ENST00000589753 DCTPP1Q9H773 170 aa18.82■□□□□ 0.6
ATG4D-211ENST00000589753 EXOC6BQ9Y2D4 811 aa18.82■□□□□ 0.6
ATG4D-211ENST00000589753 CACNA1SQ13698 1873 aa18.82■□□□□ 0.6
ATG4D-211ENST00000589753 IL15P40933 162 aaPredicted RBP18.81■□□□□ 0.6
ATG4D-211ENST00000589753 OS9Q13438 667 aaPredicted RBP18.81■□□□□ 0.6
ATG4D-211ENST00000589753 DALRD3Q5D0E6 543 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 586.1 ms