RNA–Protein interactions for RNA: ENST00000589455.5

LINC01140-209, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-209ENST00000589455 HSP90AB3PQ58FF7 597 aa20.71■□□□□ 0.91
LINC01140-209ENST00000589455 LRP10Q7Z4F1 713 aa20.71■□□□□ 0.91
LINC01140-209ENST00000589455 MCOLN1Q9GZU1 580 aa20.71■□□□□ 0.91
LINC01140-209ENST00000589455 TSKSQ9UJT2 592 aa20.71■□□□□ 0.91
LINC01140-209ENST00000589455 HIRAP54198 1017 aaPredicted RBP20.7■□□□□ 0.9
LINC01140-209ENST00000589455 TMC4Q7Z404 712 aa20.7■□□□□ 0.9
LINC01140-209ENST00000589455 H7C1D1 291 aa20.69■□□□□ 0.9
LINC01140-209ENST00000589455 PDIA6Q15084 440 aa20.69■□□□□ 0.9
LINC01140-209ENST00000589455 DDX46Q7L014 1031 aaKnown RBP20.69■□□□□ 0.9
LINC01140-209ENST00000589455 BABAM1Q9NWV8 329 aa20.69■□□□□ 0.9
LINC01140-209ENST00000589455 PCDH10Q9P2E7 1040 aa20.69■□□□□ 0.9
LINC01140-209ENST00000589455 CNOT7Q9UIV1 285 aaKnown RBP20.69■□□□□ 0.9
LINC01140-209ENST00000589455 NUP98P52948 1817 aa20.69■□□□□ 0.9
LINC01140-209ENST00000589455 RAD17O75943 681 aa20.68■□□□□ 0.9
LINC01140-209ENST00000589455 DPF2Q92785 391 aa20.68■□□□□ 0.9
LINC01140-209ENST00000589455 THUMPD2Q9BTF0 503 aaKnown RBP20.68■□□□□ 0.9
LINC01140-209ENST00000589455 GRAPQ13588 217 aa20.67■□□□□ 0.9
LINC01140-209ENST00000589455 GRAPLQ8TC17 118 aaPredicted RBP20.67■□□□□ 0.9
LINC01140-209ENST00000589455 TSPYL4Q9UJ04 414 aa20.67■□□□□ 0.9
LINC01140-209ENST00000589455 NLRP10Q86W26 655 aa20.66■□□□□ 0.9
LINC01140-209ENST00000589455 ZNF408Q9H9D4 720 aa20.66■□□□□ 0.9
LINC01140-209ENST00000589455 KDM3BQ7LBC6 1761 aa20.66■□□□□ 0.9
LINC01140-209ENST00000589455 TRPM7Q96QT4 1865 aa20.66■□□□□ 0.9
LINC01140-209ENST00000589455 SH3TC1Q8TE82 1336 aa20.65■□□□□ 0.9
LINC01140-209ENST00000589455 MAPK8IP3Q9UPT6 1336 aa20.65■□□□□ 0.9
LINC01140-209ENST00000589455 EIF2S2P20042 333 aaKnown RBP20.65■□□□□ 0.9
LINC01140-209ENST00000589455 DGKZQ13574 1117 aa20.65■□□□□ 0.9
LINC01140-209ENST00000589455 TRPM4Q8TD43 1214 aa20.65■□□□□ 0.9
LINC01140-209ENST00000589455 HCLS1P14317 486 aaPredicted RBP20.64■□□□□ 0.89
LINC01140-209ENST00000589455 HUNKP57058 714 aa20.64■□□□□ 0.89
LINC01140-209ENST00000589455 TCIRG1Q13488 830 aa20.64■□□□□ 0.89
LINC01140-209ENST00000589455 TRMT112Q9UI30 125 aaKnown RBP20.64■□□□□ 0.89
LINC01140-209ENST00000589455 YDJCA8MPS7 323 aa20.63■□□□□ 0.89
LINC01140-209ENST00000589455 COPS6Q7L5N1 327 aa20.63■□□□□ 0.89
LINC01140-209ENST00000589455 USP48Q86UV5 1035 aa20.63■□□□□ 0.89
LINC01140-209ENST00000589455 MICALL2Q8IY33 904 aa20.63■□□□□ 0.89
LINC01140-209ENST00000589455 CCDC102AQ96A19 550 aa20.63■□□□□ 0.89
LINC01140-209ENST00000589455 CFAP44Q96MT7 982 aa20.63■□□□□ 0.89
LINC01140-209ENST00000589455 SAGE1Q9NXZ1 904 aa20.63■□□□□ 0.89
LINC01140-209ENST00000589455 RPS12P25398 132 aaKnown RBP20.62■□□□□ 0.89
LINC01140-209ENST00000589455 PROSER3Q2NL68 480 aa20.62■□□□□ 0.89
LINC01140-209ENST00000589455 WASHC4Q2M389 1173 aa20.61■□□□□ 0.89
LINC01140-209ENST00000589455 RGMBQ6NW40 437 aa20.61■□□□□ 0.89
LINC01140-209ENST00000589455 KRT26Q7Z3Y9 468 aa20.6■□□□□ 0.89
LINC01140-209ENST00000589455 C2orf69Q8N8R5 385 aa20.6■□□□□ 0.89
LINC01140-209ENST00000589455 XAGE3Q8WTP9 111 aa20.6■□□□□ 0.89
LINC01140-209ENST00000589455 ZIC5Q96T25 663 aa20.6■□□□□ 0.89
LINC01140-209ENST00000589455 FAM155AB1AL88 458 aaPredicted RBP20.59■□□□□ 0.89
LINC01140-209ENST00000589455 ANXA1P04083 346 aa20.59■□□□□ 0.89
LINC01140-209ENST00000589455 GBA2Q9HCG7 927 aaPredicted RBP20.59■□□□□ 0.89
LINC01140-209ENST00000589455 ZBTB12Q9Y330 459 aaPredicted RBP20.59■□□□□ 0.89
LINC01140-209ENST00000589455 SHTN1A0MZ66 631 aa20.58■□□□□ 0.89
LINC01140-209ENST00000589455 PSMD14O00487 310 aa20.58■□□□□ 0.89
LINC01140-209ENST00000589455 RIPK4P57078 832 aa20.58■□□□□ 0.89
LINC01140-209ENST00000589455 LMOD3Q0VAK6 560 aa20.58■□□□□ 0.89
LINC01140-209ENST00000589455 AIMP1Q12904 312 aaKnown RBP20.58■□□□□ 0.89
LINC01140-209ENST00000589455 SF3B3Q15393 1217 aaKnown RBP20.58■□□□□ 0.89
LINC01140-209ENST00000589455 SAMD7Q7Z3H4 446 aa20.58■□□□□ 0.89
LINC01140-209ENST00000589455 DCPSQ96C86 337 aaKnown RBP20.58■□□□□ 0.89
LINC01140-209ENST00000589455 NSFL1CQ9UNZ2 370 aaKnown RBP20.58■□□□□ 0.89
LINC01140-209ENST00000589455 REM2Q8IYK8 340 aaPredicted RBP20.57■□□□□ 0.88
LINC01140-209ENST00000589455 EYA3Q99504 573 aa20.57■□□□□ 0.88
LINC01140-209ENST00000589455 ZNF157P51786 506 aaPredicted RBP20.55■□□□□ 0.88
LINC01140-209ENST00000589455 KIF23Q02241 960 aaPredicted RBP20.55■□□□□ 0.88
LINC01140-209ENST00000589455 TBC1D10BQ4KMP7 808 aaPredicted RBP20.55■□□□□ 0.88
LINC01140-209ENST00000589455 DBNDD1Q9H9R9 158 aa20.55■□□□□ 0.88
LINC01140-209ENST00000589455 C6orf229H3BNL8 230 aa20.54■□□□□ 0.88
LINC01140-209ENST00000589455 PLBD2Q8NHP8 589 aa20.54■□□□□ 0.88
LINC01140-209ENST00000589455 RNF186Q9NXI6 227 aa20.54■□□□□ 0.88
LINC01140-209ENST00000589455 POLLQ9UGP5 575 aa20.54■□□□□ 0.88
LINC01140-209ENST00000589455 DLK2Q6UY11 383 aa20.53■□□□□ 0.88
LINC01140-209ENST00000589455 ANKRD13DQ6ZTN6 518 aa20.53■□□□□ 0.88
LINC01140-209ENST00000589455 SULF1Q8IWU6 871 aa20.53■□□□□ 0.88
LINC01140-209ENST00000589455 CELF1Q92879 486 aaKnown RBP20.53■□□□□ 0.88
LINC01140-209ENST00000589455 ISCA1Q9BUE6 129 aa20.53■□□□□ 0.88
LINC01140-209ENST00000589455 DUOX1Q9NRD9 1551 aa20.53■□□□□ 0.88
LINC01140-209ENST00000589455 ANKRD36CQ5JPF3 1778 aa20.52■□□□□ 0.88
LINC01140-209ENST00000589455 CHL1O00533 1208 aa20.52■□□□□ 0.88
LINC01140-209ENST00000589455 ECE2O60344 883 aa20.52■□□□□ 0.88
LINC01140-209ENST00000589455 EGFRP00533 1210 aa20.52■□□□□ 0.88
LINC01140-209ENST00000589455 SLC10A3P09131 477 aa20.52■□□□□ 0.88
LINC01140-209ENST00000589455 VIL1P09327 827 aaKnown RBP20.52■□□□□ 0.88
LINC01140-209ENST00000589455 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
LINC01140-209ENST00000589455 TRIM28Q13263 835 aaKnown RBP20.52■□□□□ 0.88
LINC01140-209ENST00000589455 NECTIN2Q92692 538 aa20.52■□□□□ 0.88
LINC01140-209ENST00000589455 DLG5Q8TDM6 1919 aa20.52■□□□□ 0.88
LINC01140-209ENST00000589455 ADM5C9JUS6 153 aa20.51■□□□□ 0.87
LINC01140-209ENST00000589455 RIMBP2O15034 1052 aa20.51■□□□□ 0.87
LINC01140-209ENST00000589455 TRPA1O75762 1119 aa20.51■□□□□ 0.87
LINC01140-209ENST00000589455 HOXB7P09629 217 aa20.51■□□□□ 0.87
LINC01140-209ENST00000589455 RPS8P62241 208 aaKnown RBP20.51■□□□□ 0.87
LINC01140-209ENST00000589455 GPSM2P81274 684 aa20.51■□□□□ 0.87
LINC01140-209ENST00000589455 KIF4BQ2VIQ3 1234 aa20.51■□□□□ 0.87
LINC01140-209ENST00000589455 RBM26Q5T8P6 1007 aaKnown RBP20.51■□□□□ 0.87
LINC01140-209ENST00000589455 TBC1D16Q8TBP0 767 aa20.51■□□□□ 0.87
LINC01140-209ENST00000589455 FAM89AQ96GI7 184 aa20.51■□□□□ 0.87
LINC01140-209ENST00000589455 ZC3H12CQ9C0D7 883 aaKnown RBP20.51■□□□□ 0.87
LINC01140-209ENST00000589455 CASP8AP2Q9UKL3 1982 aa20.51■□□□□ 0.87
LINC01140-209ENST00000589455 RTL9Q8NET4 1388 aa20.5■□□□□ 0.87
LINC01140-209ENST00000589455 FKBP1BP68106 108 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms