RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 C16orf46Q6P387 395 aa11.25□□□□□ -0.61
ATG4D-210ENST00000588972 RIMS2Q9UQ26 1411 aa11.25□□□□□ -0.61
ATG4D-210ENST00000588972 PPP1R12BO60237 982 aaPredicted RBP11.24□□□□□ -0.61
ATG4D-210ENST00000588972 RECKO95980 971 aa11.24□□□□□ -0.61
ATG4D-210ENST00000588972 P4HBP07237 508 aaKnown RBP11.24□□□□□ -0.61
ATG4D-210ENST00000588972 RPIAP49247 311 aa11.24□□□□□ -0.61
ATG4D-210ENST00000588972 KCNC4Q03721 635 aa11.24□□□□□ -0.61
ATG4D-210ENST00000588972 RC3H1Q5TC82 1133 aaKnown RBP11.24□□□□□ -0.61
ATG4D-210ENST00000588972 MEX3CQ5U5Q3 659 aaKnown RBP11.24□□□□□ -0.61
ATG4D-210ENST00000588972 ZNF772Q68DY9 489 aaPredicted RBP11.24□□□□□ -0.61
ATG4D-210ENST00000588972 CYP2U1Q7Z449 544 aa11.24□□□□□ -0.61
ATG4D-210ENST00000588972 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.24□□□□□ -0.615e-7■■■■■ 26.9
ATG4D-210ENST00000588972 SCHIP1Q9P0W5 487 aaPredicted RBP11.24□□□□□ -0.61
ATG4D-210ENST00000588972 TLL2Q9Y6L7 1015 aa11.24□□□□□ -0.61
ATG4D-210ENST00000588972 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.23□□□□□ -0.61
ATG4D-210ENST00000588972 GNRH1P01148 92 aa11.23□□□□□ -0.61
ATG4D-210ENST00000588972 TBCELQ5QJ74 424 aa11.23□□□□□ -0.61
ATG4D-210ENST00000588972 STAG2Q8N3U4 1231 aa11.23□□□□□ -0.61
ATG4D-210ENST00000588972 MPNDQ8N594 471 aa11.23□□□□□ -0.61
ATG4D-210ENST00000588972 NDUFB5O43674 189 aa11.22□□□□□ -0.61
ATG4D-210ENST00000588972 ITGBL1O95965 494 aaPredicted RBP11.22□□□□□ -0.61
ATG4D-210ENST00000588972 GGCXP38435 758 aa11.22□□□□□ -0.61
ATG4D-210ENST00000588972 MYT1Q01538 1121 aa11.22□□□□□ -0.61
ATG4D-210ENST00000588972 PPP1R26Q5T8A7 1209 aaPredicted RBP11.22□□□□□ -0.61
ATG4D-210ENST00000588972 SLC9A9Q8IVB4 645 aa11.22□□□□□ -0.61
ATG4D-210ENST00000588972 CCDC116Q8IYX3 515 aa11.22□□□□□ -0.61
ATG4D-210ENST00000588972 PIK3R4Q99570 1358 aa11.22□□□□□ -0.61
ATG4D-210ENST00000588972 C2orf49Q9BVC5 232 aaPredicted RBP11.22□□□□□ -0.61
ATG4D-210ENST00000588972 CDK12Q9NYV4 1490 aaPredicted RBP11.22□□□□□ -0.61
ATG4D-210ENST00000588972 A6NJY4 79 aa11.21□□□□□ -0.61
ATG4D-210ENST00000588972 TNFRSF10BO14763 440 aa11.21□□□□□ -0.61
ATG4D-210ENST00000588972 MTFR1Q15390 333 aa11.21□□□□□ -0.61
ATG4D-210ENST00000588972 ESCO1Q5FWF5 840 aa11.21□□□□□ -0.61
ATG4D-210ENST00000588972 BRPF3Q9ULD4 1205 aa11.21□□□□□ -0.61
ATG4D-210ENST00000588972 UNC13BO14795 1591 aa11.2□□□□□ -0.62
ATG4D-210ENST00000588972 TRPM2O94759 1503 aa11.2□□□□□ -0.62
ATG4D-210ENST00000588972 ADAMTS13Q76LX8 1427 aa11.2□□□□□ -0.62
ATG4D-210ENST00000588972 ANKRD50Q9ULJ7 1429 aa11.2□□□□□ -0.62
ATG4D-210ENST00000588972 ADH1CP00326 375 aa11.2□□□□□ -0.62
ATG4D-210ENST00000588972 ADD1P35611 737 aaKnown RBP11.2□□□□□ -0.62
ATG4D-210ENST00000588972 EIF1AXP47813 144 aaKnown RBP11.2□□□□□ -0.62
ATG4D-210ENST00000588972 SMTNP53814 917 aa11.2□□□□□ -0.62
ATG4D-210ENST00000588972 COX20Q5RI15 118 aa11.2□□□□□ -0.62
ATG4D-210ENST00000588972 TBX22Q9Y458 520 aa11.2□□□□□ -0.62
ATG4D-210ENST00000588972 DCCP43146 1447 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 ROCK1Q13464 1354 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 SIAH2O43255 324 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 TREHO43280 583 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 ATF3P18847 181 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 FMR1Q06787 632 aaKnown RBP eCLIP11.19□□□□□ -0.62
ATG4D-210ENST00000588972 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.19□□□□□ -0.62
ATG4D-210ENST00000588972 CITED4Q96RK1 184 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 BCL11AQ9H165 835 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 RAB6BQ9NRW1 208 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 STIM2Q9P246 746 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 ASXL1Q8IXJ9 1541 aa11.19□□□□□ -0.62
ATG4D-210ENST00000588972 FZD6O60353 706 aa11.18□□□□□ -0.62
ATG4D-210ENST00000588972 CD2BP2O95400 341 aaKnown RBP11.18□□□□□ -0.62
ATG4D-210ENST00000588972 RXRBP28702 533 aa11.18□□□□□ -0.62
ATG4D-210ENST00000588972 ALKBH2Q6NS38 261 aa11.18□□□□□ -0.62
ATG4D-210ENST00000588972 QTRT2Q9H974 415 aaKnown RBP11.18□□□□□ -0.62
ATG4D-210ENST00000588972 ARHGEF10LQ9HCE6 1279 aa11.18□□□□□ -0.62
ATG4D-210ENST00000588972 CCDC87Q9NVE4 849 aa11.18□□□□□ -0.62
ATG4D-210ENST00000588972 E9PCH4 1651 aa11.17□□□□□ -0.62
ATG4D-210ENST00000588972 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
ATG4D-210ENST00000588972 NR3C2P08235 984 aa11.17□□□□□ -0.62
ATG4D-210ENST00000588972 PSMA6P60900 246 aaKnown RBP11.17□□□□□ -0.62
ATG4D-210ENST00000588972 NR5A1Q13285 461 aa11.17□□□□□ -0.62
ATG4D-210ENST00000588972 TSNAXIP1Q2TAA8 658 aa11.17□□□□□ -0.62
ATG4D-210ENST00000588972 XAGE2Q96GT9 111 aa11.17□□□□□ -0.62
ATG4D-210ENST00000588972 USP3Q9Y6I4 520 aa11.17□□□□□ -0.62
ATG4D-210ENST00000588972 XRN1Q8IZH2 1706 aaKnown RBP11.16□□□□□ -0.62
ATG4D-210ENST00000588972 IL2RAP01589 272 aa11.16□□□□□ -0.62
ATG4D-210ENST00000588972 MRPL58Q14197 206 aaKnown RBP11.16□□□□□ -0.62
ATG4D-210ENST00000588972 DSC3Q14574 896 aa11.16□□□□□ -0.62
ATG4D-210ENST00000588972 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
ATG4D-210ENST00000588972 BRINP3Q76B58 766 aa11.16□□□□□ -0.62
ATG4D-210ENST00000588972 C8orf37Q96NL8 207 aa11.16□□□□□ -0.62
ATG4D-210ENST00000588972 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
ATG4D-210ENST00000588972 LRFN2Q9ULH4 789 aa11.16□□□□□ -0.62
ATG4D-210ENST00000588972 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
ATG4D-210ENST00000588972 IQGAP3Q86VI3 1631 aa11.16□□□□□ -0.62
ATG4D-210ENST00000588972 IGHA2P01877 340 aa11.15□□□□□ -0.62
ATG4D-210ENST00000588972 AAMPQ13685 434 aa11.15□□□□□ -0.62
ATG4D-210ENST00000588972 TMC1Q8TDI8 760 aa11.15□□□□□ -0.62
ATG4D-210ENST00000588972 MYO19Q96H55 970 aa11.15□□□□□ -0.62
ATG4D-210ENST00000588972 PRKD2Q9BZL6 878 aa11.15□□□□□ -0.62
ATG4D-210ENST00000588972 IQSEC3Q9UPP2 1182 aaPredicted RBP11.15□□□□□ -0.62
ATG4D-210ENST00000588972 AFF2P51816 1311 aa11.14□□□□□ -0.63
ATG4D-210ENST00000588972 CDK2AP1O14519 115 aa11.14□□□□□ -0.63
ATG4D-210ENST00000588972 DMRTB1Q96MA1 342 aa11.14□□□□□ -0.63
ATG4D-210ENST00000588972 FAM129BQ96TA1 746 aa11.14□□□□□ -0.63
ATG4D-210ENST00000588972 BACH2Q9BYV9 841 aa11.14□□□□□ -0.63
ATG4D-210ENST00000588972 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
ATG4D-210ENST00000588972 RGS12O14924 1447 aa11.14□□□□□ -0.63
ATG4D-210ENST00000588972 NAIPQ13075 1403 aa11.14□□□□□ -0.63
ATG4D-210ENST00000588972 PTPRUQ92729 1446 aa11.14□□□□□ -0.63
ATG4D-210ENST00000588972 SETBP1Q9Y6X0 1596 aa11.14□□□□□ -0.63
ATG4D-210ENST00000588972 EP400Q96L91 3159 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms