RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
LSM14A-206ENST00000588582 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
LSM14A-206ENST00000588582 ADCK5Q3MIX3 580 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 ZNF569Q5MCW4 686 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 PPFIBP1Q86W92 1011 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 MRFAP1L1Q96HT8 127 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 CPLX1O14810 134 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 CTAGE5O15320 804 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 CAVIN2O95810 425 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 RPSAP08865 295 aaKnown RBP12.09□□□□□ -0.47
LSM14A-206ENST00000588582 H2AFXP16104 143 aaPredicted RBP12.09□□□□□ -0.47
LSM14A-206ENST00000588582 N4BP2L2Q92802 583 aaPredicted RBP12.09□□□□□ -0.47
LSM14A-206ENST00000588582 GBP3Q9H0R5 595 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 SCAF11Q99590 1463 aaKnown RBP12.09□□□□□ -0.47
LSM14A-206ENST00000588582 ABCC2Q92887 1545 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 TEFQ10587 303 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 LONRF3Q496Y0 759 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 E4F1Q66K89 784 aaPredicted RBP12.09□□□□□ -0.47
LSM14A-206ENST00000588582 CAPZA3Q96KX2 299 aa12.09□□□□□ -0.47
LSM14A-206ENST00000588582 MKRN1Q9UHC7 482 aaKnown RBP12.09□□□□□ -0.47
LSM14A-206ENST00000588582 MSH6P52701 1360 aa12.08□□□□□ -0.48
LSM14A-206ENST00000588582 CBFA2T2O43439 604 aa12.08□□□□□ -0.48
LSM14A-206ENST00000588582 SASH3O75995 380 aa12.08□□□□□ -0.48
LSM14A-206ENST00000588582 CCDC70Q6NSX1 233 aa12.08□□□□□ -0.48
LSM14A-206ENST00000588582 EMILIN1Q9Y6C2 1016 aa12.08□□□□□ -0.48
LSM14A-206ENST00000588582 ZNF853P0CG23 659 aa12.08□□□□□ -0.48
LSM14A-206ENST00000588582 E2F5Q15329 346 aa12.08□□□□□ -0.48
LSM14A-206ENST00000588582 SULT6B1Q6IMI4 303 aa12.08□□□□□ -0.48
LSM14A-206ENST00000588582 CTAGE15A4D2H0 777 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 MPHOSPH10O00566 681 aaKnown RBP12.07□□□□□ -0.48
LSM14A-206ENST00000588582 CTAGE8P0CG41 777 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 HSPA4P34932 840 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 ADKP55263 362 aaKnown RBP12.07□□□□□ -0.48
LSM14A-206ENST00000588582 CCZ1BP86790 482 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 CCZ1P86791 482 aaPredicted RBP12.07□□□□□ -0.48
LSM14A-206ENST00000588582 C14orf37Q86TY3 774 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 CTAGE6Q86UF2 777 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 CTAGE4Q8IX94 777 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 BCAS4Q8TDM0 211 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 ATRIPQ8WXE1 791 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 DHX58Q96C10 678 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 TROQ12816 1431 aaPredicted RBP12.07□□□□□ -0.48
LSM14A-206ENST00000588582 EPB41L2O43491 1005 aaKnown RBP12.07□□□□□ -0.48
LSM14A-206ENST00000588582 ZMYND10O75800 440 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 TBC1D8O95759 1140 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 NYAP1Q6ZVC0 841 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 EFCAB13Q8IY85 973 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 HOOK1Q9UJC3 728 aaKnown RBP12.07□□□□□ -0.48
LSM14A-206ENST00000588582 RBM8AQ9Y5S9 174 aaKnown RBP12.07□□□□□ -0.48
LSM14A-206ENST00000588582 POLR1AO95602 1720 aaPredicted RBP12.07□□□□□ -0.48
LSM14A-206ENST00000588582 IL16Q14005 1332 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 RGS12O14924 1447 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 PNMA6EA0A0J9YXQ4 647 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 H3BQF6 201 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 NDUFAB1O14561 156 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
LSM14A-206ENST00000588582 SCP2P22307 547 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 GCKP35557 465 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 FANCCQ00597 558 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 FUCA2Q9BTY2 467 aa12.07□□□□□ -0.48
LSM14A-206ENST00000588582 CCT4P50991 539 aaKnown RBP12.06□□□□□ -0.48
LSM14A-206ENST00000588582 DNA2P51530 1060 aa12.06□□□□□ -0.48
LSM14A-206ENST00000588582 TMEM87AQ8NBN3 555 aa12.06□□□□□ -0.48
LSM14A-206ENST00000588582 BOLA2Q9H3K6 86 aa12.06□□□□□ -0.48
LSM14A-206ENST00000588582 POLD4Q9HCU8 107 aa12.06□□□□□ -0.48
LSM14A-206ENST00000588582 KANK1Q14678 1352 aa12.06□□□□□ -0.48
LSM14A-206ENST00000588582 A0A087WUV0 522 aaPredicted RBP12.06□□□□□ -0.48
LSM14A-206ENST00000588582 ACTN3Q08043 901 aaPredicted RBP12.06□□□□□ -0.48
LSM14A-206ENST00000588582 MTX1Q13505 466 aa12.06□□□□□ -0.48
LSM14A-206ENST00000588582 G2E3Q7L622 706 aa12.06□□□□□ -0.48
LSM14A-206ENST00000588582 KIRREL3Q8IZU9 778 aa12.06□□□□□ -0.48
LSM14A-206ENST00000588582 BAG1Q99933 345 aaPredicted RBP12.06□□□□□ -0.48
LSM14A-206ENST00000588582 C9orf78Q9NZ63 289 aaPredicted RBP12.06□□□□□ -0.48
LSM14A-206ENST00000588582 MARCKSP29966 332 aaPredicted RBP12.06□□□□□ -0.48
LSM14A-206ENST00000588582 EIF5P55010 431 aaKnown RBP12.06□□□□□ -0.48
LSM14A-206ENST00000588582 FAM160A1Q05DH4 1040 aa12.06□□□□□ -0.48
LSM14A-206ENST00000588582 NESP48681 1621 aa12.06□□□□□ -0.48
LSM14A-206ENST00000588582 CC2D2AQ9P2K1 1620 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 ANKRD1Q15327 319 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 CABP1Q9NZU7 370 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 TADA3O75528 432 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
LSM14A-206ENST00000588582 DPCR1Q3MIW9 517 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 AACSQ86V21 672 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 ERC1Q8IUD2 1116 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 FAM76AQ8TAV0 307 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 ABCB6Q9NP58 842 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 ATP1A3P13637 1013 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 CCDC148Q8NFR7 591 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 PCMTD1Q96MG8 357 aaPredicted RBP12.05□□□□□ -0.48
LSM14A-206ENST00000588582 IRX2Q9BZI1 471 aaPredicted RBP12.05□□□□□ -0.48
LSM14A-206ENST00000588582 VEZTQ9HBM0 779 aa12.05□□□□□ -0.48
LSM14A-206ENST00000588582 CPSF2Q9P2I0 782 aaKnown RBP12.05□□□□□ -0.48
LSM14A-206ENST00000588582 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.05□□□□□ -0.48
LSM14A-206ENST00000588582 RPAP1Q9BWH6 1393 aaPredicted RBP12.04□□□□□ -0.48
LSM14A-206ENST00000588582 RNF40O75150 1001 aa12.04□□□□□ -0.48
LSM14A-206ENST00000588582 TXLNAP40222 546 aa12.04□□□□□ -0.48
LSM14A-206ENST00000588582 PTH1RQ03431 593 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms