RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
NEDD4L-223ENST00000588516 SMC3Q9UQE7 1217 aa16.83■□□□□ 0.28
NEDD4L-223ENST00000588516 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.28
NEDD4L-223ENST00000588516 WNK3Q9BYP7 1800 aa16.83■□□□□ 0.28
NEDD4L-223ENST00000588516 UVSSAQ2YD98 709 aa16.82■□□□□ 0.28
NEDD4L-223ENST00000588516 GPT2Q8TD30 523 aa16.82■□□□□ 0.28
NEDD4L-223ENST00000588516 TFCP2L1Q9NZI6 479 aa16.82■□□□□ 0.28
NEDD4L-223ENST00000588516 KAT6BQ8WYB5 2073 aa16.82■□□□□ 0.28
NEDD4L-223ENST00000588516 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
NEDD4L-223ENST00000588516 PKP1Q13835 747 aa16.81■□□□□ 0.28
NEDD4L-223ENST00000588516 RIC3Q7Z5B4 369 aa16.81■□□□□ 0.28
NEDD4L-223ENST00000588516 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
NEDD4L-223ENST00000588516 TTC14Q96N46 770 aa16.81■□□□□ 0.28
NEDD4L-223ENST00000588516 ALDH8A1Q9H2A2 487 aaPredicted RBP16.81■□□□□ 0.28
NEDD4L-223ENST00000588516 TSPY26PQ9H489 355 aa16.81■□□□□ 0.28
NEDD4L-223ENST00000588516 SCN11AQ9UI33 1791 aa16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 COL15A1P39059 1388 aa16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 RFX7Q2KHR2 1363 aa16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 ZSCAN22P10073 491 aaPredicted RBP16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 PDCP20941 246 aa16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 CWC27Q6UX04 472 aaKnown RBP16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 UPF3BQ9BZI7 483 aaKnown RBP16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 SNRKQ9NRH2 765 aa16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 HMG20BQ9P0W2 317 aa16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 CCDC39Q9UFE4 941 aa16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 PNPLA7Q6ZV29 1317 aa16.8■□□□□ 0.28
NEDD4L-223ENST00000588516 KCNQ3O43525 872 aa16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 CAPN15O75808 1086 aa16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 AACSQ86V21 672 aa16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 PDLIM2Q96JY6 352 aa16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 SLC52A2Q9HAB3 445 aa16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 ZSWIM6Q9HCJ5 1215 aa16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 PDRG1Q9NUG6 133 aa16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 NHSQ6T4R5 1651 aa16.79■□□□□ 0.28
NEDD4L-223ENST00000588516 STX6O43752 255 aa16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 TPM2P07951 284 aa16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 KCNJ4P48050 445 aa16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 TERF1P54274 439 aa16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 KRT32Q14532 448 aa16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 ZNF790Q6PG37 636 aa16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 CHMP4CQ96CF2 233 aa16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 ERBB3P21860 1342 aa16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 ERBB4Q15303 1308 aa16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 COL18A1P39060 1754 aa16.78■□□□□ 0.28
NEDD4L-223ENST00000588516 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.28
NEDD4L-223ENST00000588516 AK2P54819 239 aa16.77■□□□□ 0.28
NEDD4L-223ENST00000588516 UBE2HP62256 183 aa16.77■□□□□ 0.28
NEDD4L-223ENST00000588516 SLC27A3Q5K4L6 730 aa16.77■□□□□ 0.28
NEDD4L-223ENST00000588516 CCDC183Q5T5S1 534 aa16.77■□□□□ 0.28
NEDD4L-223ENST00000588516 TTC5Q8N0Z6 440 aa16.77■□□□□ 0.28
NEDD4L-223ENST00000588516 METTL22Q9BUU2 404 aaPredicted RBP16.77■□□□□ 0.28
NEDD4L-223ENST00000588516 RBSNQ9H1K0 784 aa16.77■□□□□ 0.28
NEDD4L-223ENST00000588516 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.27
NEDD4L-223ENST00000588516 SNRPA1P09661 255 aaKnown RBP16.76■□□□□ 0.27
NEDD4L-223ENST00000588516 CASTP20810 708 aaKnown RBP16.76■□□□□ 0.27
NEDD4L-223ENST00000588516 APLP1P51693 650 aa16.76■□□□□ 0.27
NEDD4L-223ENST00000588516 RUFY3Q7L099 469 aa16.76■□□□□ 0.27
NEDD4L-223ENST00000588516 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
NEDD4L-223ENST00000588516 TMEM63CQ9P1W3 806 aa16.76■□□□□ 0.27
NEDD4L-223ENST00000588516 MAP4K4O95819 1239 aaPredicted RBP16.75■□□□□ 0.27
NEDD4L-223ENST00000588516 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
NEDD4L-223ENST00000588516 JAKMIP1Q96N16 626 aaKnown RBP16.75■□□□□ 0.27
NEDD4L-223ENST00000588516 FMNL2Q96PY5 1086 aa16.75■□□□□ 0.27
NEDD4L-223ENST00000588516 NOL7Q9UMY1 257 aaKnown RBP16.75■□□□□ 0.27
NEDD4L-223ENST00000588516 MRC1P22897 1456 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 SYCE3A1L190 88 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 KCNQ4P56696 695 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 GCKRQ14397 625 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 NOL8Q76FK4 1167 aaKnown RBP16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 USP48Q86UV5 1035 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 MAP4K1Q92918 833 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 SUCLG2Q96I99 432 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 COPRSQ9NQ92 184 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 NLRP2Q9NX02 1062 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 BTAF1O14981 1849 aa16.74■□□□□ 0.27
NEDD4L-223ENST00000588516 NEURL1BA8MQ27 555 aa16.73■□□□□ 0.27
NEDD4L-223ENST00000588516 F13A1P00488 732 aa16.73■□□□□ 0.27
NEDD4L-223ENST00000588516 ANXA1P04083 346 aa16.73■□□□□ 0.27
NEDD4L-223ENST00000588516 PHKG2P15735 406 aa16.73■□□□□ 0.27
NEDD4L-223ENST00000588516 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
NEDD4L-223ENST00000588516 ANKRD13DQ6ZTN6 518 aa16.73■□□□□ 0.27
NEDD4L-223ENST00000588516 BICC1Q9H694 974 aaKnown RBP16.73■□□□□ 0.27
NEDD4L-223ENST00000588516 RGPD5Q99666 1765 aa16.73■□□□□ 0.27
NEDD4L-223ENST00000588516 IL2RBP14784 551 aa16.72■□□□□ 0.27
NEDD4L-223ENST00000588516 SYT1P21579 422 aa16.72■□□□□ 0.27
NEDD4L-223ENST00000588516 CWF19L2Q2TBE0 894 aaKnown RBP16.72■□□□□ 0.27
NEDD4L-223ENST00000588516 PRPF40BQ6NWY9 871 aaKnown RBP16.72■□□□□ 0.27
NEDD4L-223ENST00000588516 RASEFQ8IZ41 740 aa16.72■□□□□ 0.27
NEDD4L-223ENST00000588516 FSD1Q9BTV5 496 aa16.72■□□□□ 0.27
NEDD4L-223ENST00000588516 RBM8AQ9Y5S9 174 aaKnown RBP16.72■□□□□ 0.27
NEDD4L-223ENST00000588516 RPAP1Q9BWH6 1393 aaPredicted RBP16.72■□□□□ 0.27
NEDD4L-223ENST00000588516 ZNF500O60304 480 aaPredicted RBP16.71■□□□□ 0.27
NEDD4L-223ENST00000588516 ATP5JP18859 108 aa16.71■□□□□ 0.27
NEDD4L-223ENST00000588516 PDIA6Q15084 440 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms