RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 CWC25Q9NXE8 425 aaPredicted RBP16.65■□□□□ 0.26
CNTD1-204ENST00000588408 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
CNTD1-204ENST00000588408 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
CNTD1-204ENST00000588408 ISY1Q9ULR0 285 aaKnown RBP16.65■□□□□ 0.26
CNTD1-204ENST00000588408 ATP5JP18859 108 aa16.65■□□□□ 0.26
CNTD1-204ENST00000588408 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
CNTD1-204ENST00000588408 ME3Q16798 604 aa16.64■□□□□ 0.25
CNTD1-204ENST00000588408 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
CNTD1-204ENST00000588408 SNRKQ9NRH2 765 aa16.64■□□□□ 0.25
CNTD1-204ENST00000588408 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
CNTD1-204ENST00000588408 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
CNTD1-204ENST00000588408 TNS2Q63HR2 1409 aa16.64■□□□□ 0.25
CNTD1-204ENST00000588408 PRIM1P49642 420 aaKnown RBP16.64■□□□□ 0.25
CNTD1-204ENST00000588408 ZNF445P59923 1031 aa16.64■□□□□ 0.25
CNTD1-204ENST00000588408 TIMM10P62072 90 aa16.64■□□□□ 0.25
CNTD1-204ENST00000588408 TPRNQ4KMQ1 711 aa16.64■□□□□ 0.25
CNTD1-204ENST00000588408 VPS53Q5VIR6 699 aa16.64■□□□□ 0.25
CNTD1-204ENST00000588408 HIP1O00291 1037 aa16.63■□□□□ 0.25
CNTD1-204ENST00000588408 SYT1P21579 422 aa16.63■□□□□ 0.25
CNTD1-204ENST00000588408 TPCN1Q9ULQ1 816 aa16.63■□□□□ 0.25
CNTD1-204ENST00000588408 ZNF609O15014 1411 aa16.63■□□□□ 0.25
CNTD1-204ENST00000588408 TAF5LO75529 589 aa16.63■□□□□ 0.25
CNTD1-204ENST00000588408 NEUROD6Q96NK8 337 aa16.63■□□□□ 0.25
CNTD1-204ENST00000588408 CCDC85AQ96PX6 553 aaPredicted RBP16.63■□□□□ 0.25
CNTD1-204ENST00000588408 PUS3Q9BZE2 481 aaKnown RBP16.63■□□□□ 0.25
CNTD1-204ENST00000588408 TM6SF1Q9BZW5 370 aa16.63■□□□□ 0.25
CNTD1-204ENST00000588408 RBSNQ9H1K0 784 aa16.63■□□□□ 0.25
CNTD1-204ENST00000588408 BTG4Q9NY30 223 aa16.63■□□□□ 0.25
CNTD1-204ENST00000588408 WDR33Q9C0J8 1336 aaKnown RBP16.62■□□□□ 0.25
CNTD1-204ENST00000588408 NHSL1Q5SYE7 1610 aa16.62■□□□□ 0.25
CNTD1-204ENST00000588408 SYCE3A1L190 88 aa16.62■□□□□ 0.25
CNTD1-204ENST00000588408 ZKSCAN1P17029 563 aaPredicted RBP16.62■□□□□ 0.25
CNTD1-204ENST00000588408 DNAJC10Q8IXB1 793 aa16.62■□□□□ 0.25
CNTD1-204ENST00000588408 PIGBQ92521 554 aa16.62■□□□□ 0.25
CNTD1-204ENST00000588408 TMOD3Q9NYL9 352 aa16.62■□□□□ 0.25
CNTD1-204ENST00000588408 USP48Q86UV5 1035 aa16.62■□□□□ 0.25
CNTD1-204ENST00000588408 SMC3Q9UQE7 1217 aa16.62■□□□□ 0.25
CNTD1-204ENST00000588408 CNPY2Q9Y2B0 182 aa16.62■□□□□ 0.25
CNTD1-204ENST00000588408 GJB2P29033 226 aa16.61■□□□□ 0.25
CNTD1-204ENST00000588408 NASPP49321 788 aaPredicted RBP16.61■□□□□ 0.25
CNTD1-204ENST00000588408 ITGB4P16144 1822 aa16.61■□□□□ 0.25
CNTD1-204ENST00000588408 STX6O43752 255 aa16.6■□□□□ 0.25
CNTD1-204ENST00000588408 SYNE4Q8N205 404 aa16.6■□□□□ 0.25
CNTD1-204ENST00000588408 HAUS7Q99871 368 aa16.6■□□□□ 0.25
CNTD1-204ENST00000588408 JCADQ9P266 1359 aa16.6■□□□□ 0.25
CNTD1-204ENST00000588408 ZSCAN22P10073 491 aaPredicted RBP16.6■□□□□ 0.25
CNTD1-204ENST00000588408 CCDC191Q8NCU4 936 aa16.6■□□□□ 0.25
CNTD1-204ENST00000588408 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.6■□□□□ 0.25
CNTD1-204ENST00000588408 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.59■□□□□ 0.25
CNTD1-204ENST00000588408 ATG3Q9NT62 314 aa16.59■□□□□ 0.25
CNTD1-204ENST00000588408 GOLIM4O00461 696 aa16.58■□□□□ 0.25
CNTD1-204ENST00000588408 FAM89AQ96GI7 184 aa16.58■□□□□ 0.25
CNTD1-204ENST00000588408 ISCA1Q9BUE6 129 aa16.58■□□□□ 0.25
CNTD1-204ENST00000588408 TOB2Q14106 344 aaPredicted RBP16.58■□□□□ 0.24
CNTD1-204ENST00000588408 A0A0G2JLW4 131 aa16.57■□□□□ 0.24
CNTD1-204ENST00000588408 EYA2O00167 538 aa16.57■□□□□ 0.24
CNTD1-204ENST00000588408 RPS6KB1P23443 525 aa16.57■□□□□ 0.24
CNTD1-204ENST00000588408 BLOC1S2Q6QNY1 142 aa16.57■□□□□ 0.24
CNTD1-204ENST00000588408 SLC4A9Q96Q91 983 aa16.57■□□□□ 0.24
CNTD1-204ENST00000588408 F13A1P00488 732 aa16.57■□□□□ 0.24
CNTD1-204ENST00000588408 STK3Q13188 491 aa16.57■□□□□ 0.24
CNTD1-204ENST00000588408 TCIRG1Q13488 830 aa16.57■□□□□ 0.24
CNTD1-204ENST00000588408 MTMR6Q9Y217 621 aa16.57■□□□□ 0.24
CNTD1-204ENST00000588408 HLFQ16534 295 aa16.56■□□□□ 0.24
CNTD1-204ENST00000588408 A0A1B0GUL7 405 aa16.56■□□□□ 0.24
CNTD1-204ENST00000588408 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
CNTD1-204ENST00000588408 USPL1Q5W0Q7 1092 aa16.56■□□□□ 0.24
CNTD1-204ENST00000588408 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
CNTD1-204ENST00000588408 ZSCAN31Q96LW9 406 aaPredicted RBP16.56■□□□□ 0.24
CNTD1-204ENST00000588408 SH2B1Q9NRF2 756 aaPredicted RBP16.56■□□□□ 0.24
CNTD1-204ENST00000588408 LAMA4Q16363 1823 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 MBD3O95983 291 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 CYP21A2P08686 494 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 GPTP24298 496 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 PSMA5P28066 241 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 MCMDC2Q4G0Z9 681 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 RNF20Q5VTR2 975 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 LRSAM1Q6UWE0 723 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 PAG1Q9NWQ8 432 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 VPS37CA5D8V6 355 aaPredicted RBP16.55■□□□□ 0.24
CNTD1-204ENST00000588408 FIBPO43427 364 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 ADORA1P30542 326 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 LRRC2Q9BYS8 371 aa16.55■□□□□ 0.24
CNTD1-204ENST00000588408 DNM1Q05193 864 aaKnown RBP16.54■□□□□ 0.24
CNTD1-204ENST00000588408 STOX1Q6ZVD7 989 aa16.54■□□□□ 0.24
CNTD1-204ENST00000588408 FAM173BQ6P4H8 233 aa16.53■□□□□ 0.24
CNTD1-204ENST00000588408 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
CNTD1-204ENST00000588408 SYTL4Q96C24 671 aaPredicted RBP16.53■□□□□ 0.24
CNTD1-204ENST00000588408 FERMT3Q86UX7 667 aa16.53■□□□□ 0.24
CNTD1-204ENST00000588408 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.24
CNTD1-204ENST00000588408 PKNOX2Q96KN3 472 aa16.52■□□□□ 0.24
CNTD1-204ENST00000588408 PPP1R9BQ96SB3 815 aa16.52■□□□□ 0.24
CNTD1-204ENST00000588408 HMG20BQ9P0W2 317 aa16.52■□□□□ 0.24
CNTD1-204ENST00000588408 IFIT1P09914 478 aaKnown RBP16.52■□□□□ 0.23
CNTD1-204ENST00000588408 KIF6Q6ZMV9 814 aa16.52■□□□□ 0.23
CNTD1-204ENST00000588408 CDC37L1Q7L3B6 337 aa16.52■□□□□ 0.23
CNTD1-204ENST00000588408 CCDC173Q0VFZ6 552 aa16.51■□□□□ 0.23
CNTD1-204ENST00000588408 SCARF1Q14162 830 aa16.51■□□□□ 0.23
CNTD1-204ENST00000588408 CCDC57Q2TAC2 916 aa16.51■□□□□ 0.23
CNTD1-204ENST00000588408 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms