RNA–Protein interactions for RNA: ENST00000588094.1

ZNF404-203, Transcript of zinc finger protein 404, humanhuman

TSL 3

Gene ZNF404, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-203ENST00000588094 RTL5Q5HYW3 569 aaPredicted RBP12.22□□□□□ -0.45
ZNF404-203ENST00000588094 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
ZNF404-203ENST00000588094 MEIS3Q99687 375 aa12.22□□□□□ -0.45
ZNF404-203ENST00000588094 COG6Q9Y2V7 657 aa12.22□□□□□ -0.45
ZNF404-203ENST00000588094 CD2APQ9Y5K6 639 aa12.22□□□□□ -0.45
ZNF404-203ENST00000588094 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.45
ZNF404-203ENST00000588094 UBTFL1P0CB47 393 aaPredicted RBP12.21□□□□□ -0.45
ZNF404-203ENST00000588094 CRY2Q49AN0 593 aa12.21□□□□□ -0.45
ZNF404-203ENST00000588094 NLRP3Q96P20 1036 aa12.21□□□□□ -0.45
ZNF404-203ENST00000588094 CHMP4BQ9H444 224 aaKnown RBP12.21□□□□□ -0.45
ZNF404-203ENST00000588094 PDZRN3Q9UPQ7 1066 aa12.21□□□□□ -0.45
ZNF404-203ENST00000588094 HDAC5Q9UQL6 1122 aa12.21□□□□□ -0.45
ZNF404-203ENST00000588094 SLX4Q8IY92 1834 aa12.21□□□□□ -0.46
ZNF404-203ENST00000588094 ARFGEF1Q9Y6D6 1849 aa12.21□□□□□ -0.46
ZNF404-203ENST00000588094 TGFB2P61812 414 aa12.2□□□□□ -0.46
ZNF404-203ENST00000588094 FOXO4P98177 505 aa12.2□□□□□ -0.46
ZNF404-203ENST00000588094 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
ZNF404-203ENST00000588094 C3orf67Q6ZVT6 689 aa12.2□□□□□ -0.46
ZNF404-203ENST00000588094 KAZALD1Q96I82 304 aa12.2□□□□□ -0.46
ZNF404-203ENST00000588094 SUCLG2Q96I99 432 aa12.2□□□□□ -0.46
ZNF404-203ENST00000588094 CSF1RP07333 972 aa12.19□□□□□ -0.46
ZNF404-203ENST00000588094 SRGNP10124 158 aa12.19□□□□□ -0.46
ZNF404-203ENST00000588094 CTSWP56202 376 aa12.19□□□□□ -0.46
ZNF404-203ENST00000588094 RABL6Q3YEC7 729 aaPredicted RBP12.19□□□□□ -0.46
ZNF404-203ENST00000588094 EPHA10Q5JZY3 1008 aa12.19□□□□□ -0.46
ZNF404-203ENST00000588094 TTLL11Q8NHH1 800 aa12.19□□□□□ -0.46
ZNF404-203ENST00000588094 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
ZNF404-203ENST00000588094 PPP1R1BQ9UD71 204 aaPredicted RBP12.19□□□□□ -0.46
ZNF404-203ENST00000588094 LRRFIP2Q9Y608 721 aaKnown RBP12.19□□□□□ -0.46
ZNF404-203ENST00000588094 RTL9Q8NET4 1388 aa12.18□□□□□ -0.46
ZNF404-203ENST00000588094 H0YIN7 160 aa12.18□□□□□ -0.46
ZNF404-203ENST00000588094 GNAI2P04899 355 aa12.18□□□□□ -0.46
ZNF404-203ENST00000588094 HOXA10P31260 410 aaPredicted RBP12.18□□□□□ -0.46
ZNF404-203ENST00000588094 CRBNQ96SW2 442 aa12.18□□□□□ -0.46
ZNF404-203ENST00000588094 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
ZNF404-203ENST00000588094 BICC1Q9H694 974 aaKnown RBP12.18□□□□□ -0.46
ZNF404-203ENST00000588094 NPR1P16066 1061 aa12.17□□□□□ -0.46
ZNF404-203ENST00000588094 KCNA3P22001 575 aa12.17□□□□□ -0.46
ZNF404-203ENST00000588094 CCDC152Q4G0S7 254 aa12.17□□□□□ -0.46
ZNF404-203ENST00000588094 C2CD5Q86YS7 1000 aa12.17□□□□□ -0.46
ZNF404-203ENST00000588094 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
ZNF404-203ENST00000588094 MASTLQ96GX5 879 aa12.17□□□□□ -0.46
ZNF404-203ENST00000588094 SYT17Q9BSW7 474 aa12.17□□□□□ -0.46
ZNF404-203ENST00000588094 A0A1B0GUL6 1792 aa12.17□□□□□ -0.46
ZNF404-203ENST00000588094 COL4A1P02462 1669 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 A0A0G2JLW4 131 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 DPEP1P16444 411 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 CHRNA5P30532 468 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 MTX1Q13505 466 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 AAMPQ13685 434 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 STYK1Q6J9G0 422 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 LMBR1LQ6UX01 489 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 RPGRQ92834 1020 aaKnown RBP12.16□□□□□ -0.46
ZNF404-203ENST00000588094 CRAMP1Q96RY5 1269 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 LRRC37AA6NMS7 1700 aa12.16□□□□□ -0.46
ZNF404-203ENST00000588094 FAM161AQ3B820 660 aa12.15□□□□□ -0.46
ZNF404-203ENST00000588094 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
ZNF404-203ENST00000588094 NLGN2Q8NFZ4 835 aa12.15□□□□□ -0.46
ZNF404-203ENST00000588094 RBM17Q96I25 401 aaKnown RBP12.15□□□□□ -0.46
ZNF404-203ENST00000588094 GREM2Q9H772 168 aa12.15□□□□□ -0.46
ZNF404-203ENST00000588094 FER1L6Q2WGJ9 1857 aa12.14□□□□□ -0.47
ZNF404-203ENST00000588094 CCDC88AQ3V6T2 1871 aa12.14□□□□□ -0.47
ZNF404-203ENST00000588094 ALDH1B1P30837 517 aa12.14□□□□□ -0.47
ZNF404-203ENST00000588094 EXOC6Q8TAG9 804 aa12.14□□□□□ -0.47
ZNF404-203ENST00000588094 CNKSR1Q969H4 720 aa12.14□□□□□ -0.47
ZNF404-203ENST00000588094 ZNF622Q969S3 477 aaKnown RBP eCLIP12.14□□□□□ -0.47
ZNF404-203ENST00000588094 CCDC85AQ96PX6 553 aaPredicted RBP12.14□□□□□ -0.47
ZNF404-203ENST00000588094 C1orf115Q9H7X2 142 aa12.14□□□□□ -0.47
ZNF404-203ENST00000588094 PIM2Q9P1W9 311 aa12.14□□□□□ -0.47
ZNF404-203ENST00000588094 ITGA6P23229 1130 aa12.13□□□□□ -0.47
ZNF404-203ENST00000588094 IRX6P78412 446 aaPredicted RBP12.13□□□□□ -0.47
ZNF404-203ENST00000588094 ATP8B2P98198 1209 aa12.13□□□□□ -0.47
ZNF404-203ENST00000588094 IFIT5Q13325 482 aaKnown RBP12.13□□□□□ -0.47
ZNF404-203ENST00000588094 GRAPQ13588 217 aa12.13□□□□□ -0.47
ZNF404-203ENST00000588094 CEP85Q6P2H3 762 aa12.13□□□□□ -0.47
ZNF404-203ENST00000588094 RPAP2Q8IXW5 612 aaPredicted RBP12.13□□□□□ -0.47
ZNF404-203ENST00000588094 TTLL6Q8N841 843 aa12.13□□□□□ -0.47
ZNF404-203ENST00000588094 GRAPLQ8TC17 118 aaPredicted RBP12.13□□□□□ -0.47
ZNF404-203ENST00000588094 CDC5LQ99459 802 aaKnown RBP12.13□□□□□ -0.47
ZNF404-203ENST00000588094 SEC31BQ9NQW1 1179 aa12.13□□□□□ -0.47
ZNF404-203ENST00000588094 CHMP3Q9Y3E7 222 aa12.13□□□□□ -0.47
ZNF404-203ENST00000588094 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
ZNF404-203ENST00000588094 BBOX1O75936 387 aa12.12□□□□□ -0.47
ZNF404-203ENST00000588094 RFX5P48382 616 aaPredicted RBP12.12□□□□□ -0.47
ZNF404-203ENST00000588094 RPS8P62241 208 aaKnown RBP12.12□□□□□ -0.47
ZNF404-203ENST00000588094 CCDC57Q2TAC2 916 aa12.12□□□□□ -0.47
ZNF404-203ENST00000588094 CELF1Q92879 486 aaKnown RBP12.12□□□□□ -0.47
ZNF404-203ENST00000588094 SBF1O95248 1867 aa12.12□□□□□ -0.47
ZNF404-203ENST00000588094 LTBP1Q14766 1721 aa12.11□□□□□ -0.47
ZNF404-203ENST00000588094 PNMA6EA0A0J9YXQ4 647 aa12.11□□□□□ -0.47
ZNF404-203ENST00000588094 SRGAP3O43295 1099 aa12.11□□□□□ -0.47
ZNF404-203ENST00000588094 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
ZNF404-203ENST00000588094 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
ZNF404-203ENST00000588094 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
ZNF404-203ENST00000588094 ANKRD18AQ8IVF6 992 aa12.11□□□□□ -0.47
ZNF404-203ENST00000588094 SIRT2Q8IXJ6 389 aa12.11□□□□□ -0.47
ZNF404-203ENST00000588094 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
ZNF404-203ENST00000588094 CHD4Q14839 1912 aa12.1□□□□□ -0.47
ZNF404-203ENST00000588094 IGHMBP2P38935 993 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms