RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 PPP1R42Q7Z4L9 355 aa20.49■□□□□ 0.87
NCLN-203ENST00000587740 VPS33BQ9H267 617 aa20.49■□□□□ 0.87
NCLN-203ENST00000587740 PGAP2Q9UHJ9 254 aa20.49■□□□□ 0.87
NCLN-203ENST00000587740 MLLT1Q03111 559 aaPredicted RBP20.48■□□□□ 0.87
NCLN-203ENST00000587740 PDIA6Q15084 440 aa20.48■□□□□ 0.87
NCLN-203ENST00000587740 PARP10Q53GL7 1025 aa20.47■□□□□ 0.87
NCLN-203ENST00000587740 PROSER3Q2NL68 480 aa20.46■□□□□ 0.87
NCLN-203ENST00000587740 HHIPL1Q96JK4 782 aa20.46■□□□□ 0.87
NCLN-203ENST00000587740 UTP14AQ9BVJ6 771 aaKnown RBP20.46■□□□□ 0.87
NCLN-203ENST00000587740 ERBB4Q15303 1308 aa20.46■□□□□ 0.87
NCLN-203ENST00000587740 LAMB2P55268 1798 aa20.45■□□□□ 0.86
NCLN-203ENST00000587740 SHTN1A0MZ66 631 aa20.45■□□□□ 0.86
NCLN-203ENST00000587740 RAD17O75943 681 aa20.45■□□□□ 0.86
NCLN-203ENST00000587740 ANXA1P04083 346 aa20.45■□□□□ 0.86
NCLN-203ENST00000587740 CIAPIN1Q6FI81 312 aa20.45■□□□□ 0.86
NCLN-203ENST00000587740 SUPT20HQ8NEM7 779 aa20.45■□□□□ 0.86
NCLN-203ENST00000587740 TRPM4Q8TD43 1214 aa20.45■□□□□ 0.86
NCLN-203ENST00000587740 MCOLN1Q9GZU1 580 aa20.45■□□□□ 0.86
NCLN-203ENST00000587740 TAF1P21675 1872 aa20.44■□□□□ 0.86
NCLN-203ENST00000587740 CCER2I3L3R5 266 aa20.44■□□□□ 0.86
NCLN-203ENST00000587740 TMPOP42166 694 aaKnown RBP20.44■□□□□ 0.86
NCLN-203ENST00000587740 RIPK4P57078 832 aa20.44■□□□□ 0.86
NCLN-203ENST00000587740 KIAA2012Q0VF49 1180 aa20.44■□□□□ 0.86
NCLN-203ENST00000587740 DPP8Q6V1X1 898 aaPredicted RBP20.44■□□□□ 0.86
NCLN-203ENST00000587740 SP8Q8IXZ3 490 aa20.44■□□□□ 0.86
NCLN-203ENST00000587740 ZIC5Q96T25 663 aa20.44■□□□□ 0.86
NCLN-203ENST00000587740 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
NCLN-203ENST00000587740 YDJCA8MPS7 323 aa20.43■□□□□ 0.86
NCLN-203ENST00000587740 CA12O43570 354 aa20.43■□□□□ 0.86
NCLN-203ENST00000587740 BBOX1O75936 387 aa20.43■□□□□ 0.86
NCLN-203ENST00000587740 HCLS1P14317 486 aaPredicted RBP20.43■□□□□ 0.86
NCLN-203ENST00000587740 BRPF1P55201 1214 aaPredicted RBP20.43■□□□□ 0.86
NCLN-203ENST00000587740 DLK2Q6UY11 383 aa20.43■□□□□ 0.86
NCLN-203ENST00000587740 MPNDQ8N594 471 aa20.43■□□□□ 0.86
NCLN-203ENST00000587740 ZC3H15Q8WU90 426 aaKnown RBP20.43■□□□□ 0.86
NCLN-203ENST00000587740 ZNF408Q9H9D4 720 aa20.43■□□□□ 0.86
NCLN-203ENST00000587740 ANKRD36CQ5JPF3 1778 aa20.42■□□□□ 0.86
NCLN-203ENST00000587740 EIF2S2P20042 333 aaKnown RBP20.42■□□□□ 0.86
NCLN-203ENST00000587740 NEUROD2Q15784 382 aa20.42■□□□□ 0.86
NCLN-203ENST00000587740 FAM9BQ8IZU0 186 aa20.42■□□□□ 0.86
NCLN-203ENST00000587740 CDHR2Q9BYE9 1310 aa20.42■□□□□ 0.86
NCLN-203ENST00000587740 TNRC18O15417 2968 aaPredicted RBP20.41■□□□□ 0.86
NCLN-203ENST00000587740 LMOD3Q0VAK6 560 aa20.41■□□□□ 0.86
NCLN-203ENST00000587740 CDC37L1Q7L3B6 337 aa20.41■□□□□ 0.86
NCLN-203ENST00000587740 BCL2L13Q9BXK5 485 aa20.41■□□□□ 0.86
NCLN-203ENST00000587740 CNOT7Q9UIV1 285 aaKnown RBP20.41■□□□□ 0.86
NCLN-203ENST00000587740 APAF1O14727 1248 aa20.4■□□□□ 0.86
NCLN-203ENST00000587740 TNIP1Q15025 636 aa20.4■□□□□ 0.86
NCLN-203ENST00000587740 NLRP10Q86W26 655 aa20.4■□□□□ 0.86
NCLN-203ENST00000587740 MIER1Q8N108 512 aa20.4■□□□□ 0.86
NCLN-203ENST00000587740 DUOX1Q9NRD9 1551 aa20.4■□□□□ 0.86
NCLN-203ENST00000587740 TSPYL4Q9UJ04 414 aa20.4■□□□□ 0.86
NCLN-203ENST00000587740 POLR2AP24928 1970 aaKnown RBP20.39■□□□□ 0.86
NCLN-203ENST00000587740 GRAPQ13588 217 aa20.39■□□□□ 0.85
NCLN-203ENST00000587740 GRAPLQ8TC17 118 aaPredicted RBP20.39■□□□□ 0.85
NCLN-203ENST00000587740 COPS6Q7L5N1 327 aa20.38■□□□□ 0.85
NCLN-203ENST00000587740 USP48Q86UV5 1035 aa20.38■□□□□ 0.85
NCLN-203ENST00000587740 ZBTB12Q9Y330 459 aaPredicted RBP20.38■□□□□ 0.85
NCLN-203ENST00000587740 DGKZQ13574 1117 aa20.37■□□□□ 0.85
NCLN-203ENST00000587740 DDX46Q7L014 1031 aaKnown RBP20.37■□□□□ 0.85
NCLN-203ENST00000587740 MICALL2Q8IY33 904 aa20.37■□□□□ 0.85
NCLN-203ENST00000587740 XAGE3Q8WTP9 111 aa20.37■□□□□ 0.85
NCLN-203ENST00000587740 ZNF428Q96B54 188 aa20.37■□□□□ 0.85
NCLN-203ENST00000587740 CFAP44Q96MT7 982 aa20.37■□□□□ 0.85
NCLN-203ENST00000587740 PDE4DIPQ5VU43 2346 aa20.36■□□□□ 0.85
NCLN-203ENST00000587740 EGFRP00533 1210 aa20.36■□□□□ 0.85
NCLN-203ENST00000587740 HUNKP57058 714 aa20.36■□□□□ 0.85
NCLN-203ENST00000587740 AIMP1Q12904 312 aaKnown RBP20.36■□□□□ 0.85
NCLN-203ENST00000587740 NOGQ13253 232 aa20.36■□□□□ 0.85
NCLN-203ENST00000587740 TCIRG1Q13488 830 aa20.36■□□□□ 0.85
NCLN-203ENST00000587740 SAMD7Q7Z3H4 446 aa20.36■□□□□ 0.85
NCLN-203ENST00000587740 NECTIN2Q92692 538 aa20.36■□□□□ 0.85
NCLN-203ENST00000587740 TRMT112Q9UI30 125 aaKnown RBP20.36■□□□□ 0.85
NCLN-203ENST00000587740 H7C1D1 291 aa20.35■□□□□ 0.85
NCLN-203ENST00000587740 PSMD14O00487 310 aa20.35■□□□□ 0.85
NCLN-203ENST00000587740 SH3TC1Q8TE82 1336 aa20.34■□□□□ 0.85
NCLN-203ENST00000587740 LRRC37AA6NMS7 1700 aa20.34■□□□□ 0.85
NCLN-203ENST00000587740 FAM155AB1AL88 458 aaPredicted RBP20.34■□□□□ 0.85
NCLN-203ENST00000587740 HSP90AB3PQ58FF7 597 aa20.34■□□□□ 0.85
NCLN-203ENST00000587740 TRIM35Q9UPQ4 493 aa20.34■□□□□ 0.85
NCLN-203ENST00000587740 COL4A1P02462 1669 aa20.33■□□□□ 0.85
NCLN-203ENST00000587740 DPF2Q92785 391 aa20.33■□□□□ 0.85
NCLN-203ENST00000587740 DBNDD1Q9H9R9 158 aa20.33■□□□□ 0.85
NCLN-203ENST00000587740 KCNQ5Q9NR82 932 aa20.33■□□□□ 0.85
NCLN-203ENST00000587740 KRT24Q2M2I5 525 aa20.32■□□□□ 0.84
NCLN-203ENST00000587740 TBC1D10BQ4KMP7 808 aaPredicted RBP20.32■□□□□ 0.84
NCLN-203ENST00000587740 RGMBQ6NW40 437 aa20.32■□□□□ 0.84
NCLN-203ENST00000587740 DDX60Q8IY21 1712 aaKnown RBP20.32■□□□□ 0.84
NCLN-203ENST00000587740 WASHC4Q2M389 1173 aa20.31■□□□□ 0.84
NCLN-203ENST00000587740 KRT26Q7Z3Y9 468 aa20.31■□□□□ 0.84
NCLN-203ENST00000587740 TMC4Q7Z404 712 aa20.31■□□□□ 0.84
NCLN-203ENST00000587740 CELF1Q92879 486 aaKnown RBP20.31■□□□□ 0.84
NCLN-203ENST00000587740 BABAM1Q9NWV8 329 aa20.31■□□□□ 0.84
NCLN-203ENST00000587740 POLLQ9UGP5 575 aa20.31■□□□□ 0.84
NCLN-203ENST00000587740 ADM5C9JUS6 153 aa20.3■□□□□ 0.84
NCLN-203ENST00000587740 RIMBP2O15034 1052 aa20.3■□□□□ 0.84
NCLN-203ENST00000587740 GBA2Q9HCG7 927 aaPredicted RBP20.3■□□□□ 0.84
NCLN-203ENST00000587740 NSFL1CQ9UNZ2 370 aaKnown RBP20.3■□□□□ 0.84
NCLN-203ENST00000587740 RTL9Q8NET4 1388 aa20.3■□□□□ 0.84
NCLN-203ENST00000587740 GPSM2P81274 684 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms