RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CCDC8Q9H0W5 538 aaPredicted RBP22.01■■□□□ 1.11
DDX39A-206ENST00000587730 ZSCAN16Q9H4T2 348 aaPredicted RBP22.01■■□□□ 1.11
DDX39A-206ENST00000587730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.01■■□□□ 1.11
DDX39A-206ENST00000587730 KIF3AQ9Y496 699 aa22.01■■□□□ 1.11
DDX39A-206ENST00000587730 RGPD2P0DJD1 1756 aa22■■□□□ 1.11
DDX39A-206ENST00000587730 PDIA6Q15084 440 aa22■■□□□ 1.11
DDX39A-206ENST00000587730 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22■■□□□ 1.11
DDX39A-206ENST00000587730 SPATA32Q96LK8 384 aa22■■□□□ 1.11
DDX39A-206ENST00000587730 TNMDQ9H2S6 317 aa22■■□□□ 1.11
DDX39A-206ENST00000587730 XIRP1Q702N8 1843 aaKnown RBP21.99■■□□□ 1.11
DDX39A-206ENST00000587730 UBAP1LF5GYI3 381 aa21.99■■□□□ 1.11
DDX39A-206ENST00000587730 TAF5LO75529 589 aa21.99■■□□□ 1.11
DDX39A-206ENST00000587730 IGKV5-2P06315 115 aa21.99■■□□□ 1.11
DDX39A-206ENST00000587730 CDC37L1Q7L3B6 337 aa21.99■■□□□ 1.11
DDX39A-206ENST00000587730 KIAA1524Q8TCG1 905 aa21.99■■□□□ 1.11
DDX39A-206ENST00000587730 LLPHQ9BRT6 129 aaKnown RBP21.99■■□□□ 1.11
DDX39A-206ENST00000587730 BOLA2Q9H3K6 86 aa21.99■■□□□ 1.11
DDX39A-206ENST00000587730 TYRO3Q06418 890 aa21.99■■□□□ 1.11
DDX39A-206ENST00000587730 ZNF790Q6PG37 636 aa21.99■■□□□ 1.11
DDX39A-206ENST00000587730 TTC12Q9H892 705 aaPredicted RBP21.99■■□□□ 1.11
DDX39A-206ENST00000587730 CFAP45Q9UL16 551 aa21.99■■□□□ 1.11
DDX39A-206ENST00000587730 TOB2Q14106 344 aaPredicted RBP21.98■■□□□ 1.11
DDX39A-206ENST00000587730 GTF3C6Q969F1 213 aa21.98■■□□□ 1.11
DDX39A-206ENST00000587730 CLSTN2Q9H4D0 955 aa21.98■■□□□ 1.11
DDX39A-206ENST00000587730 SLC52A2Q9HAB3 445 aa21.97■■□□□ 1.11
DDX39A-206ENST00000587730 ATL3Q6DD88 541 aa21.96■■□□□ 1.11
DDX39A-206ENST00000587730 LEO1Q8WVC0 666 aaPredicted RBP21.96■■□□□ 1.11
DDX39A-206ENST00000587730 RAPGEF4Q8WZA2 1011 aa21.96■■□□□ 1.11
DDX39A-206ENST00000587730 NEK1Q96PY6 1258 aa21.96■■□□□ 1.11
DDX39A-206ENST00000587730 MRVI1Q9Y6F6 885 aa21.96■■□□□ 1.11
DDX39A-206ENST00000587730 CTAGE5O15320 804 aa21.95■■□□□ 1.1
DDX39A-206ENST00000587730 PLCB2Q00722 1185 aa21.95■■□□□ 1.1
DDX39A-206ENST00000587730 AIMP1Q12904 312 aaKnown RBP21.95■■□□□ 1.1
DDX39A-206ENST00000587730 RABL6Q3YEC7 729 aaPredicted RBP21.95■■□□□ 1.1
DDX39A-206ENST00000587730 TLR7Q9NYK1 1049 aaKnown RBP21.95■■□□□ 1.1
DDX39A-206ENST00000587730 KIF1AQ12756 1690 aa21.95■■□□□ 1.1
DDX39A-206ENST00000587730 TNNI3KQ59H18 835 aa21.94■■□□□ 1.1
DDX39A-206ENST00000587730 FPGT-TNNI3KV9GXZ4 949 aa21.94■■□□□ 1.1
DDX39A-206ENST00000587730 ANKRD13DQ6ZTN6 518 aa21.94■■□□□ 1.1
DDX39A-206ENST00000587730 ZNF830Q96NB3 372 aaPredicted RBP21.94■■□□□ 1.1
DDX39A-206ENST00000587730 SIL1Q9H173 461 aa21.94■■□□□ 1.1
DDX39A-206ENST00000587730 DACT1Q9NYF0 836 aa21.94■■□□□ 1.1
DDX39A-206ENST00000587730 ERBB3P21860 1342 aa21.94■■□□□ 1.1
DDX39A-206ENST00000587730 SNRPA1P09661 255 aaKnown RBP21.93■■□□□ 1.1
DDX39A-206ENST00000587730 LIG1P18858 919 aa21.93■■□□□ 1.1
DDX39A-206ENST00000587730 MCMDC2Q4G0Z9 681 aa21.93■■□□□ 1.1
DDX39A-206ENST00000587730 NAA16Q6N069 864 aaPredicted RBP21.93■■□□□ 1.1
DDX39A-206ENST00000587730 TDRD7Q8NHU6 1098 aaKnown RBP21.93■■□□□ 1.1
DDX39A-206ENST00000587730 XAGE3Q8WTP9 111 aa21.93■■□□□ 1.1
DDX39A-206ENST00000587730 HAUS7Q99871 368 aa21.93■■□□□ 1.1
DDX39A-206ENST00000587730 FERMT3Q86UX7 667 aa21.92■■□□□ 1.1
DDX39A-206ENST00000587730 MYD88Q99836 296 aa21.92■■□□□ 1.1
DDX39A-206ENST00000587730 SH3TC1Q8TE82 1336 aa21.92■■□□□ 1.1
DDX39A-206ENST00000587730 PRAMEF22A3QJZ6 481 aa21.92■■□□□ 1.1
DDX39A-206ENST00000587730 H3BQV1 296 aa21.92■■□□□ 1.1
DDX39A-206ENST00000587730 TATP17735 454 aaPredicted RBP21.92■■□□□ 1.1
DDX39A-206ENST00000587730 IFFO2Q5TF58 517 aa21.92■■□□□ 1.1
DDX39A-206ENST00000587730 ZNF589Q86UQ0 364 aaPredicted RBP21.92■■□□□ 1.1
DDX39A-206ENST00000587730 TRPM3Q9HCF6 1732 aaPredicted RBP21.91■■□□□ 1.1
DDX39A-206ENST00000587730 CDC25BP30305 580 aa21.91■■□□□ 1.1
DDX39A-206ENST00000587730 RFX5P48382 616 aaPredicted RBP21.91■■□□□ 1.1
DDX39A-206ENST00000587730 COPS6Q7L5N1 327 aa21.91■■□□□ 1.1
DDX39A-206ENST00000587730 BICD2Q8TD16 824 aa21.91■■□□□ 1.1
DDX39A-206ENST00000587730 CCDC94Q9BW85 323 aaPredicted RBP21.91■■□□□ 1.1
DDX39A-206ENST00000587730 DBNLQ9UJU6 430 aaKnown RBP21.91■■□□□ 1.1
DDX39A-206ENST00000587730 RESTQ13127 1097 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 ZMYND15Q9H091 742 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 C19orf44Q9H6X5 657 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 GPR108Q9NPR9 543 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 SCN11AQ9UI33 1791 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 PALLDQ8WX93 1383 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 PTPN12Q05209 780 aaKnown RBP21.9■■□□□ 1.1
DDX39A-206ENST00000587730 TPRNQ4KMQ1 711 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 IFNL2Q8IZJ0 200 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 TTC5Q8N0Z6 440 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 SMARCC2Q8TAQ2 1214 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 KCNF1Q9H3M0 494 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 CBX8Q9HC52 389 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 HELLSQ9NRZ9 838 aa21.9■■□□□ 1.1
DDX39A-206ENST00000587730 AP5Z1O43299 807 aa21.89■■□□□ 1.09
DDX39A-206ENST00000587730 PFKFB2O60825 505 aa21.89■■□□□ 1.09
DDX39A-206ENST00000587730 HSP90B1P14625 803 aaKnown RBP21.89■■□□□ 1.09
DDX39A-206ENST00000587730 PHKG2P15735 406 aa21.89■■□□□ 1.09
DDX39A-206ENST00000587730 ANO6Q4KMQ2 910 aa21.89■■□□□ 1.09
DDX39A-206ENST00000587730 DDX54Q8TDD1 881 aaKnown RBP21.89■■□□□ 1.09
DDX39A-206ENST00000587730 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.89■■□□□ 1.09
DDX39A-206ENST00000587730 KDM6AO15550 1401 aaPredicted RBP21.88■■□□□ 1.09
DDX39A-206ENST00000587730 NEMFO60524 1076 aa21.88■■□□□ 1.09
DDX39A-206ENST00000587730 KBTBD3Q8NAB2 608 aa21.88■■□□□ 1.09
DDX39A-206ENST00000587730 BRF1Q92994 677 aa21.88■■□□□ 1.09
DDX39A-206ENST00000587730 DCAF5Q96JK2 942 aa21.88■■□□□ 1.09
DDX39A-206ENST00000587730 FMNL2Q96PY5 1086 aa21.88■■□□□ 1.09
DDX39A-206ENST00000587730 DSCC1Q9BVC3 393 aa21.88■■□□□ 1.09
DDX39A-206ENST00000587730 Q6ZUG5 572 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 KRT28Q7Z3Y7 464 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 PLA2G4DQ86XP0 818 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 SMAP1Q8IYB5 467 aaPredicted RBP21.87■■□□□ 1.09
DDX39A-206ENST00000587730 C5P01031 1676 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 MYL6BP14649 208 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 ZNF165P49910 485 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms