RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 ECHDC1Q9NTX5 307 aa15.7■□□□□ 0.1
PTPRS-204ENST00000587303 HEATR3Q7Z4Q2 680 aa15.7■□□□□ 0.1
PTPRS-204ENST00000587303 PTPRCP08575 1304 aa15.7■□□□□ 0.1
PTPRS-204ENST00000587303 IFIT1BQ5T764 474 aaKnown RBP15.7■□□□□ 0.1
PTPRS-204ENST00000587303 DZIP3Q86Y13 1208 aaKnown RBP15.7■□□□□ 0.1
PTPRS-204ENST00000587303 USO1O60763 962 aaKnown RBP15.7■□□□□ 0.1
PTPRS-204ENST00000587303 TCHPQ9BT92 498 aa15.7■□□□□ 0.1
PTPRS-204ENST00000587303 POLR3GO15318 223 aaPredicted RBP15.69■□□□□ 0.1
PTPRS-204ENST00000587303 TOP1P11387 765 aaKnown RBP15.69■□□□□ 0.1
PTPRS-204ENST00000587303 RGS22Q8NE09 1264 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 UBXN4Q92575 508 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 APBB1IPQ7Z5R6 666 aaPredicted RBP15.69■□□□□ 0.1
PTPRS-204ENST00000587303 WTAPQ15007 396 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 KIF4BQ2VIQ3 1234 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 ABCC11Q96J66 1382 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 URI1O94763 535 aaPredicted RBP15.69■□□□□ 0.1
PTPRS-204ENST00000587303 ZBTB9Q96C00 473 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 FAM212AQ96EL1 285 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 PIK3R4Q99570 1358 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 KIAA0586Q9BVV6 1533 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 RARSP54136 660 aaKnown RBP15.69■□□□□ 0.1
PTPRS-204ENST00000587303 DPH6Q7L8W6 267 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 GDPD2Q9HCC8 539 aa15.69■□□□□ 0.1
PTPRS-204ENST00000587303 TRMT1Q9NXH9 659 aaKnown RBP15.69■□□□□ 0.1
PTPRS-204ENST00000587303 XAGE3Q8WTP9 111 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 SCAND2PQ9GZW5 306 aaPredicted RBP15.68■□□□□ 0.1
PTPRS-204ENST00000587303 SHTN1A0MZ66 631 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 KIF5CO60282 957 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 YEATS4O95619 227 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 CALM1P0DP23 149 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 CALM2P0DP24 149 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 CALM3P0DP25 149 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 EYA3Q99504 573 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 LRRC27Q9C0I9 530 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 PTPN23Q9H3S7 1636 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 IL2RBP14784 551 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 KIF14Q15058 1648 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 HLTFQ14527 1009 aaKnown RBP eCLIP15.68■□□□□ 0.19e-7■□□□□ 8.6
PTPRS-204ENST00000587303 SFPQP23246 707 aaKnown RBP eCLIP15.68■□□□□ 0.1
PTPRS-204ENST00000587303 NOP2P46087 812 aaKnown RBP15.68■□□□□ 0.1
PTPRS-204ENST00000587303 SPECC1Q5M775 1068 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 TSNARE1Q96NA8 513 aa15.68■□□□□ 0.1
PTPRS-204ENST00000587303 NOS1P29475 1434 aa15.67■□□□□ 0.1
PTPRS-204ENST00000587303 ACTN2P35609 894 aa15.67■□□□□ 0.1
PTPRS-204ENST00000587303 ATP2B3Q16720 1220 aa15.67■□□□□ 0.1
PTPRS-204ENST00000587303 RFX1P22670 979 aa15.67■□□□□ 0.1
PTPRS-204ENST00000587303 TNNI2P48788 182 aa15.67■□□□□ 0.1
PTPRS-204ENST00000587303 ATP2C2O75185 946 aa15.67■□□□□ 0.1
PTPRS-204ENST00000587303 LRRC45Q96CN5 670 aa15.67■□□□□ 0.1
PTPRS-204ENST00000587303 BIN1O00499 593 aa15.67■□□□□ 0.1
PTPRS-204ENST00000587303 FSIP1Q8NA03 581 aa15.67■□□□□ 0.1
PTPRS-204ENST00000587303 ORC3Q9UBD5 711 aaPredicted RBP15.67■□□□□ 0.1
PTPRS-204ENST00000587303 OTUD6BQ8N6M0 293 aa15.67■□□□□ 0.1
PTPRS-204ENST00000587303 COPS6Q7L5N1 327 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 EXOC1Q9NV70 894 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 CHPF2Q9P2E5 772 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 CBX1P83916 185 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 KRT23Q9C075 422 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 FAM114A1Q8IWE2 563 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 NOD1Q9Y239 953 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 TRAPPC3LQ5T215 181 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 GNPATO15228 680 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 USP37Q86T82 979 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 PPM1EQ8WY54 764 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 LIMCH1Q9UPQ0 1083 aa15.66■□□□□ 0.1
PTPRS-204ENST00000587303 WDR7Q9Y4E6 1490 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 NCKAP5LQ9HCH0 1330 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 ZSCAN12O43309 604 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 NBPF7P0C2Y1 421 aaPredicted RBP15.65■□□□□ 0.1
PTPRS-204ENST00000587303 SP4Q02446 784 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 FAM107BQ9H098 131 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 GIGYF2Q6Y7W6 1299 aaKnown RBP15.65■□□□□ 0.1
PTPRS-204ENST00000587303 ESR2Q92731 530 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 LRRC59Q96AG4 307 aaKnown RBP15.65■□□□□ 0.1
PTPRS-204ENST00000587303 PAFAH1B1P43034 410 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 RBM17Q96I25 401 aaKnown RBP15.65■□□□□ 0.1
PTPRS-204ENST00000587303 TAOK3Q9H2K8 898 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 ZBTB21Q9ULJ3 1066 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 NEK1Q96PY6 1258 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 GCOM1H8Y6P7 765 aaPredicted RBP15.65■□□□□ 0.1
PTPRS-204ENST00000587303 MYZAPP0CAP1 466 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 FERP16591 822 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 NAPAP54920 295 aa15.65■□□□□ 0.1
PTPRS-204ENST00000587303 IQGAP2Q13576 1575 aa15.64■□□□□ 0.1
PTPRS-204ENST00000587303 MAGEB6P1A0A0J9YX57 407 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 JAG2Q9Y219 1238 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 KRT13P13646 458 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 SSFA2P28290 1259 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 TBC1D5Q92609 795 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 C6orf50Q9HD87 102 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 FANCAO15360 1455 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 PYM1Q9BRP8 204 aaKnown RBP15.64■□□□□ 0.09
PTPRS-204ENST00000587303 SPDYE3A6NKU9 549 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 MCM4P33991 863 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 MCM5P33992 734 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 GJC1P36383 396 aa15.64■□□□□ 0.09
PTPRS-204ENST00000587303 TFIP11Q9UBB9 837 aaKnown RBP15.64■□□□□ 0.09
PTPRS-204ENST00000587303 PPP1R14CQ8TAE6 165 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms