RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 KIAA1551Q9HCM1 1747 aa21.23■□□□□ 0.99
PRKCSH-203ENST00000586486 PDE6BP35913 854 aa21.22■□□□□ 0.99
PRKCSH-203ENST00000586486 C3orf67Q6ZVT6 689 aa21.22■□□□□ 0.99
PRKCSH-203ENST00000586486 TTLL11Q8NHH1 800 aa21.22■□□□□ 0.99
PRKCSH-203ENST00000586486 ERICH6BQ5W0A0 696 aa21.22■□□□□ 0.99
PRKCSH-203ENST00000586486 CEP85Q6P2H3 762 aa21.22■□□□□ 0.99
PRKCSH-203ENST00000586486 LMBR1LQ6UX01 489 aa21.22■□□□□ 0.99
PRKCSH-203ENST00000586486 PDZRN3Q9UPQ7 1066 aa21.22■□□□□ 0.99
PRKCSH-203ENST00000586486 CCDC152Q4G0S7 254 aa21.21■□□□□ 0.99
PRKCSH-203ENST00000586486 RPAP2Q8IXW5 612 aaPredicted RBP21.21■□□□□ 0.99
PRKCSH-203ENST00000586486 ATP8B2P98198 1209 aa21.18■□□□□ 0.98
PRKCSH-203ENST00000586486 FAM161AQ3B820 660 aa21.18■□□□□ 0.98
PRKCSH-203ENST00000586486 PCDHB15Q9Y5E8 787 aa21.18■□□□□ 0.98
PRKCSH-203ENST00000586486 CD2APQ9Y5K6 639 aa21.18■□□□□ 0.98
PRKCSH-203ENST00000586486 GREM2Q9H772 168 aa21.18■□□□□ 0.98
PRKCSH-203ENST00000586486 SRGNP10124 158 aa21.17■□□□□ 0.98
PRKCSH-203ENST00000586486 HOXA10P31260 410 aaPredicted RBP21.17■□□□□ 0.98
PRKCSH-203ENST00000586486 SSH3Q8TE77 659 aa21.17■□□□□ 0.98
PRKCSH-203ENST00000586486 PNMA6EA0A0J9YXQ4 647 aa21.16■□□□□ 0.98
PRKCSH-203ENST00000586486 SRGAP3O43295 1099 aa21.16■□□□□ 0.98
PRKCSH-203ENST00000586486 TGFB2P61812 414 aa21.16■□□□□ 0.98
PRKCSH-203ENST00000586486 POLA2Q14181 598 aa21.16■□□□□ 0.98
PRKCSH-203ENST00000586486 SIRT2Q8IXJ6 389 aa21.16■□□□□ 0.98
PRKCSH-203ENST00000586486 CHMP3Q9Y3E7 222 aa21.16■□□□□ 0.98
PRKCSH-203ENST00000586486 ITGA6P23229 1130 aa21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 RPGRQ92834 1020 aaKnown RBP21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 BRCA1P38398 1863 aaKnown RBP21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 COL4A1P02462 1669 aa21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 H0YIN7 160 aa21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 HMMRO75330 724 aa21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 NPR1P16066 1061 aa21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 RFX5P48382 616 aaPredicted RBP21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 IFIT5Q13325 482 aaKnown RBP21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 CCDC57Q2TAC2 916 aa21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 DDX46Q7L014 1031 aaKnown RBP21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 C2CD5Q86YS7 1000 aa21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 MASTLQ96GX5 879 aa21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 CCDC85AQ96PX6 553 aaPredicted RBP21.15■□□□□ 0.98
PRKCSH-203ENST00000586486 TAF1P21675 1872 aa21.14■□□□□ 0.97
PRKCSH-203ENST00000586486 ANKRD18BA2A2Z9 1011 aa21.14■□□□□ 0.97
PRKCSH-203ENST00000586486 STYK1Q6J9G0 422 aa21.14■□□□□ 0.97
PRKCSH-203ENST00000586486 RBM17Q96I25 401 aaKnown RBP21.14■□□□□ 0.97
PRKCSH-203ENST00000586486 CRAMP1Q96RY5 1269 aa21.14■□□□□ 0.97
PRKCSH-203ENST00000586486 SPEF2Q9C093 1822 aa21.13■□□□□ 0.97
PRKCSH-203ENST00000586486 CDC5LQ99459 802 aaKnown RBP21.13■□□□□ 0.97
PRKCSH-203ENST00000586486 SEC31BQ9NQW1 1179 aa21.13■□□□□ 0.97
PRKCSH-203ENST00000586486 HDAC1Q13547 482 aaPredicted RBP21.12■□□□□ 0.97
PRKCSH-203ENST00000586486 CHRNA5P30532 468 aa21.11■□□□□ 0.97
PRKCSH-203ENST00000586486 GRAPQ13588 217 aa21.11■□□□□ 0.97
PRKCSH-203ENST00000586486 GRAPLQ8TC17 118 aaPredicted RBP21.11■□□□□ 0.97
PRKCSH-203ENST00000586486 COPRSQ9NQ92 184 aa21.11■□□□□ 0.97
PRKCSH-203ENST00000586486 CACNA1SQ13698 1873 aa21.11■□□□□ 0.97
PRKCSH-203ENST00000586486 PTPN12Q05209 780 aaKnown RBP21.11■□□□□ 0.97
PRKCSH-203ENST00000586486 PPP1R1BQ9UD71 204 aaPredicted RBP21.11■□□□□ 0.97
PRKCSH-203ENST00000586486 LRRC37AA6NMS7 1700 aa21.1■□□□□ 0.97
PRKCSH-203ENST00000586486 DPEP1P16444 411 aa21.1■□□□□ 0.97
PRKCSH-203ENST00000586486 ALDH1B1P30837 517 aa21.1■□□□□ 0.97
PRKCSH-203ENST00000586486 CELF1Q92879 486 aaKnown RBP21.1■□□□□ 0.97
PRKCSH-203ENST00000586486 FBXO3Q9UK99 471 aa21.1■□□□□ 0.97
PRKCSH-203ENST00000586486 KCNA3P22001 575 aa21.09■□□□□ 0.97
PRKCSH-203ENST00000586486 TAF7LQ5H9L4 462 aa21.09■□□□□ 0.97
PRKCSH-203ENST00000586486 ANKRD18AQ8IVF6 992 aa21.09■□□□□ 0.97
PRKCSH-203ENST00000586486 FHDC1Q9C0D6 1143 aaPredicted RBP21.09■□□□□ 0.97
PRKCSH-203ENST00000586486 A0A1B0GUL6 1792 aa21.08■□□□□ 0.97
PRKCSH-203ENST00000586486 IGHMBP2P38935 993 aaKnown RBP21.08■□□□□ 0.97
PRKCSH-203ENST00000586486 RPS8P62241 208 aaKnown RBP21.08■□□□□ 0.97
PRKCSH-203ENST00000586486 KLHL34Q8N239 644 aa21.08■□□□□ 0.97
PRKCSH-203ENST00000586486 CNKSR1Q969H4 720 aa21.08■□□□□ 0.97
PRKCSH-203ENST00000586486 NOP58Q9Y2X3 529 aaKnown RBP21.08■□□□□ 0.97
PRKCSH-203ENST00000586486 A0A0G2JLW4 131 aa21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 BBOX1O75936 387 aa21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 TMC4Q7Z404 712 aa21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 KLHDC4Q8TBB5 520 aa21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 ZNF622Q969S3 477 aaKnown RBP eCLIP21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 ZNF594Q96JF6 807 aaPredicted RBP21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 RWDD1Q9H446 243 aaPredicted RBP21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 SLX4Q8IY92 1834 aa21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 CIAO1O76071 339 aa21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 BSDC1Q9NW68 430 aaPredicted RBP21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 PA2G4Q9UQ80 394 aaKnown RBP21.07■□□□□ 0.96
PRKCSH-203ENST00000586486 NLGN2Q8NFZ4 835 aa21.06■□□□□ 0.96
PRKCSH-203ENST00000586486 MPHOSPH8Q99549 860 aa21.06■□□□□ 0.96
PRKCSH-203ENST00000586486 PPP4R2Q9NY27 417 aa21.06■□□□□ 0.96
PRKCSH-203ENST00000586486 EYA2O00167 538 aa21.05■□□□□ 0.96
PRKCSH-203ENST00000586486 PRPF40BQ6NWY9 871 aaKnown RBP21.05■□□□□ 0.96
PRKCSH-203ENST00000586486 LDHAL6AQ6ZMR3 332 aa21.05■□□□□ 0.96
PRKCSH-203ENST00000586486 DCTPP1Q9H773 170 aa21.05■□□□□ 0.96
PRKCSH-203ENST00000586486 PPEF1O14829 653 aaPredicted RBP21.04■□□□□ 0.96
PRKCSH-203ENST00000586486 SURF6O75683 361 aaKnown RBP21.04■□□□□ 0.96
PRKCSH-203ENST00000586486 HSP90AB4PQ58FF6 505 aa21.04■□□□□ 0.96
PRKCSH-203ENST00000586486 TTLL6Q8N841 843 aa21.04■□□□□ 0.96
PRKCSH-203ENST00000586486 SYT17Q9BSW7 474 aa21.04■□□□□ 0.96
PRKCSH-203ENST00000586486 PIM2Q9P1W9 311 aa21.04■□□□□ 0.96
PRKCSH-203ENST00000586486 IGHDP01880 384 aa21.04■□□□□ 0.96
PRKCSH-203ENST00000586486 ATG9AQ7Z3C6 839 aa21.04■□□□□ 0.96
PRKCSH-203ENST00000586486 SIL1Q9H173 461 aa21.04■□□□□ 0.96
PRKCSH-203ENST00000586486 RIPOR2Q9Y4F9 1068 aa21.04■□□□□ 0.96
PRKCSH-203ENST00000586486 ARFGEF1Q9Y6D6 1849 aa21.03■□□□□ 0.96
PRKCSH-203ENST00000586486 LTBP1Q14766 1721 aa21.03■□□□□ 0.96
PRKCSH-203ENST00000586486 IL15P40933 162 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms