RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 PPP4R2Q9NY27 417 aa10.28□□□□□ -0.76
TREM1-203ENST00000586287 ATF5Q9Y2D1 282 aaPredicted RBP10.28□□□□□ -0.76
TREM1-203ENST00000586287 DDX60Q8IY21 1712 aaKnown RBP10.27□□□□□ -0.76
TREM1-203ENST00000586287 RIC1Q4ADV7 1423 aa10.27□□□□□ -0.77
TREM1-203ENST00000586287 LRP5O75197 1615 aa10.27□□□□□ -0.77
TREM1-203ENST00000586287 KLRG2A4D1S0 409 aaPredicted RBP10.27□□□□□ -0.77
TREM1-203ENST00000586287 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.77
TREM1-203ENST00000586287 PTGER2P43116 358 aa10.27□□□□□ -0.77
TREM1-203ENST00000586287 HDAC1Q13547 482 aaPredicted RBP10.27□□□□□ -0.77
TREM1-203ENST00000586287 POLA2Q14181 598 aa10.27□□□□□ -0.77
TREM1-203ENST00000586287 SRGAP3O43295 1099 aa10.26□□□□□ -0.77
TREM1-203ENST00000586287 ST5P78524 1137 aa10.26□□□□□ -0.77
TREM1-203ENST00000586287 NLRP3Q96P20 1036 aa10.26□□□□□ -0.77
TREM1-203ENST00000586287 GREM2Q9H772 168 aa10.26□□□□□ -0.77
TREM1-203ENST00000586287 HSP90B1P14625 803 aaKnown RBP10.25□□□□□ -0.77
TREM1-203ENST00000586287 PTPN12Q05209 780 aaKnown RBP10.25□□□□□ -0.77
TREM1-203ENST00000586287 FAM161AQ3B820 660 aa10.25□□□□□ -0.77
TREM1-203ENST00000586287 CRY2Q49AN0 593 aa10.25□□□□□ -0.77
TREM1-203ENST00000586287 B4GALNT3Q6L9W6 998 aa10.25□□□□□ -0.77
TREM1-203ENST00000586287 CCDC85AQ96PX6 553 aaPredicted RBP10.25□□□□□ -0.77
TREM1-203ENST00000586287 BRIP1Q9BX63 1249 aa10.25□□□□□ -0.77
TREM1-203ENST00000586287 DCTPP1Q9H773 170 aa10.25□□□□□ -0.77
TREM1-203ENST00000586287 SEC31BQ9NQW1 1179 aa10.25□□□□□ -0.77
TREM1-203ENST00000586287 RTL9Q8NET4 1388 aa10.25□□□□□ -0.77
TREM1-203ENST00000586287 TNRC6CQ9HCJ0 1690 aaKnown RBP10.25□□□□□ -0.77
TREM1-203ENST00000586287 LAMB2P55268 1798 aa10.24□□□□□ -0.77
TREM1-203ENST00000586287 NPHP1O15259 732 aa10.24□□□□□ -0.77
TREM1-203ENST00000586287 ITGA6P23229 1130 aa10.24□□□□□ -0.77
TREM1-203ENST00000586287 KLHDC4Q8TBB5 520 aa10.24□□□□□ -0.77
TREM1-203ENST00000586287 ZNF594Q96JF6 807 aaPredicted RBP10.24□□□□□ -0.77
TREM1-203ENST00000586287 COPRSQ9NQ92 184 aa10.24□□□□□ -0.77
TREM1-203ENST00000586287 PA2G4Q9UQ80 394 aaKnown RBP10.24□□□□□ -0.77
TREM1-203ENST00000586287 NOP58Q9Y2X3 529 aaKnown RBP10.24□□□□□ -0.77
TREM1-203ENST00000586287 KDM2BQ8NHM5 1336 aa10.24□□□□□ -0.77
TREM1-203ENST00000586287 COL4A1P02462 1669 aa10.24□□□□□ -0.77
TREM1-203ENST00000586287 ANKRD31Q8N7Z5 1873 aa10.23□□□□□ -0.77
TREM1-203ENST00000586287 HMMRO75330 724 aa10.23□□□□□ -0.77
TREM1-203ENST00000586287 HOXA10P31260 410 aaPredicted RBP10.23□□□□□ -0.77
TREM1-203ENST00000586287 IFIT5Q13325 482 aaKnown RBP10.23□□□□□ -0.77
TREM1-203ENST00000586287 CCDC152Q4G0S7 254 aa10.23□□□□□ -0.77
TREM1-203ENST00000586287 SMC5Q8IY18 1101 aa10.23□□□□□ -0.77
TREM1-203ENST00000586287 CCDC136Q96JN2 1154 aa10.23□□□□□ -0.77
TREM1-203ENST00000586287 RWDD1Q9H446 243 aaPredicted RBP10.23□□□□□ -0.77
TREM1-203ENST00000586287 CHMP3Q9Y3E7 222 aa10.23□□□□□ -0.77
TREM1-203ENST00000586287 C10orf71Q711Q0 1435 aa10.23□□□□□ -0.77
TREM1-203ENST00000586287 ANKRD18BA2A2Z9 1011 aa10.22□□□□□ -0.77
TREM1-203ENST00000586287 SRGNP10124 158 aa10.22□□□□□ -0.77
TREM1-203ENST00000586287 POLD1P28340 1107 aa10.22□□□□□ -0.77
TREM1-203ENST00000586287 PDE6BP35913 854 aa10.22□□□□□ -0.77
TREM1-203ENST00000586287 CCDC57Q2TAC2 916 aa10.22□□□□□ -0.77
TREM1-203ENST00000586287 CELF1Q92879 486 aaKnown RBP10.22□□□□□ -0.77
TREM1-203ENST00000586287 PUS3Q9BZE2 481 aaKnown RBP10.22□□□□□ -0.77
TREM1-203ENST00000586287 SPON1Q9HCB6 807 aa10.22□□□□□ -0.77
TREM1-203ENST00000586287 EXOC6BQ9Y2D4 811 aa10.22□□□□□ -0.77
TREM1-203ENST00000586287 MYH3P11055 1940 aa10.21□□□□□ -0.77
TREM1-203ENST00000586287 SURF6O75683 361 aaKnown RBP10.21□□□□□ -0.77
TREM1-203ENST00000586287 SASH1O94885 1247 aa10.21□□□□□ -0.77
TREM1-203ENST00000586287 KCNA3P22001 575 aa10.21□□□□□ -0.77
TREM1-203ENST00000586287 LRRC24Q50LG9 513 aa10.21□□□□□ -0.77
TREM1-203ENST00000586287 ATG9AQ7Z3C6 839 aa10.21□□□□□ -0.77
TREM1-203ENST00000586287 CRAMP1Q96RY5 1269 aa10.21□□□□□ -0.77
TREM1-203ENST00000586287 RNF39Q9H2S5 420 aa10.21□□□□□ -0.77
TREM1-203ENST00000586287 RIPOR2Q9Y4F9 1068 aa10.21□□□□□ -0.77
TREM1-203ENST00000586287 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.21□□□□□ -0.77
TREM1-203ENST00000586287 EYA2O00167 538 aa10.2□□□□□ -0.78
TREM1-203ENST00000586287 CHRNA5P30532 468 aa10.2□□□□□ -0.78
TREM1-203ENST00000586287 RPS8P62241 208 aaKnown RBP10.2□□□□□ -0.78
TREM1-203ENST00000586287 DDX46Q7L014 1031 aaKnown RBP10.2□□□□□ -0.78
TREM1-203ENST00000586287 CENPQQ7L2Z9 268 aaPredicted RBP10.2□□□□□ -0.78
TREM1-203ENST00000586287 GCC1Q96CN9 775 aa10.2□□□□□ -0.78
TREM1-203ENST00000586287 SIL1Q9H173 461 aa10.2□□□□□ -0.78
TREM1-203ENST00000586287 FBXO3Q9UK99 471 aa10.2□□□□□ -0.78
TREM1-203ENST00000586287 CIAO1O76071 339 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 NPR1P16066 1061 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 TGFB2P61812 414 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 GRAPQ13588 217 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 LDHAL6AQ6ZMR3 332 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 SLC51AQ86UW1 340 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 C2CD5Q86YS7 1000 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 ANKRD18AQ8IVF6 992 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 GRAPLQ8TC17 118 aaPredicted RBP10.19□□□□□ -0.78
TREM1-203ENST00000586287 RPGRQ92834 1020 aaKnown RBP10.19□□□□□ -0.78
TREM1-203ENST00000586287 MASTLQ96GX5 879 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 RBM17Q96I25 401 aaKnown RBP10.19□□□□□ -0.78
TREM1-203ENST00000586287 CDC5LQ99459 802 aaKnown RBP10.19□□□□□ -0.78
TREM1-203ENST00000586287 BSDC1Q9NW68 430 aaPredicted RBP10.19□□□□□ -0.78
TREM1-203ENST00000586287 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 TAF1P21675 1872 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 KIF13BQ9NQT8 1826 aa10.19□□□□□ -0.78
TREM1-203ENST00000586287 COL11A2P13942 1736 aaPredicted RBP10.19□□□□□ -0.78
TREM1-203ENST00000586287 A0A0G2JLW4 131 aa10.18□□□□□ -0.78
TREM1-203ENST00000586287 H0YIN7 160 aa10.18□□□□□ -0.78
TREM1-203ENST00000586287 RAB11FIP3O75154 756 aa10.18□□□□□ -0.78
TREM1-203ENST00000586287 DPEP1P16444 411 aa10.18□□□□□ -0.78
TREM1-203ENST00000586287 IGHMBP2P38935 993 aaKnown RBP10.18□□□□□ -0.78
TREM1-203ENST00000586287 IL15P40933 162 aaPredicted RBP10.18□□□□□ -0.78
TREM1-203ENST00000586287 NUCB1Q02818 461 aa10.18□□□□□ -0.78
TREM1-203ENST00000586287 G3BP1Q13283 466 aaKnown RBP eCLIP10.18□□□□□ -0.78
TREM1-203ENST00000586287 HSP90AB4PQ58FF6 505 aa10.18□□□□□ -0.78
TREM1-203ENST00000586287 TAF7LQ5H9L4 462 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms