RNA–Protein interactions for RNA: ENST00000585978.1

SMAD2-204, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-204ENST00000585978 C2CD5Q86YS7 1000 aa17.29■□□□□ 0.36
SMAD2-204ENST00000585978 DDX19BQ9UMR2 479 aa17.29■□□□□ 0.36
SMAD2-204ENST00000585978 KLRG2A4D1S0 409 aaPredicted RBP17.28■□□□□ 0.36
SMAD2-204ENST00000585978 FAM161AQ3B820 660 aa17.28■□□□□ 0.36
SMAD2-204ENST00000585978 TTLL11Q8NHH1 800 aa17.28■□□□□ 0.36
SMAD2-204ENST00000585978 NLRP3Q96P20 1036 aa17.28■□□□□ 0.36
SMAD2-204ENST00000585978 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
SMAD2-204ENST00000585978 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
SMAD2-204ENST00000585978 GNAI3P08754 354 aa17.27■□□□□ 0.36
SMAD2-204ENST00000585978 CRY2Q49AN0 593 aa17.27■□□□□ 0.36
SMAD2-204ENST00000585978 LMBR1LQ6UX01 489 aa17.27■□□□□ 0.36
SMAD2-204ENST00000585978 GREM2Q9H772 168 aa17.27■□□□□ 0.36
SMAD2-204ENST00000585978 ZBTB40Q9NUA8 1239 aa17.27■□□□□ 0.36
SMAD2-204ENST00000585978 CD2APQ9Y5K6 639 aa17.27■□□□□ 0.36
SMAD2-204ENST00000585978 SRGNP10124 158 aa17.26■□□□□ 0.35
SMAD2-204ENST00000585978 KCNA3P22001 575 aa17.26■□□□□ 0.35
SMAD2-204ENST00000585978 PDE6BP35913 854 aa17.26■□□□□ 0.35
SMAD2-204ENST00000585978 SF3B3Q15393 1217 aaKnown RBP17.26■□□□□ 0.35
SMAD2-204ENST00000585978 SYT17Q9BSW7 474 aa17.26■□□□□ 0.35
SMAD2-204ENST00000585978 CHMP3Q9Y3E7 222 aa17.26■□□□□ 0.35
SMAD2-204ENST00000585978 GNAI2P04899 355 aa17.25■□□□□ 0.35
SMAD2-204ENST00000585978 CSF1RP07333 972 aa17.25■□□□□ 0.35
SMAD2-204ENST00000585978 RABL6Q3YEC7 729 aaPredicted RBP17.25■□□□□ 0.35
SMAD2-204ENST00000585978 ZNF622Q969S3 477 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMAD2-204ENST00000585978 H0YIN7 160 aa17.24■□□□□ 0.35
SMAD2-204ENST00000585978 KLHDC4Q8TBB5 520 aa17.24■□□□□ 0.35
SMAD2-204ENST00000585978 RPGRQ92834 1020 aaKnown RBP17.24■□□□□ 0.35
SMAD2-204ENST00000585978 CELF1Q92879 486 aaKnown RBP17.24■□□□□ 0.35
SMAD2-204ENST00000585978 PNMA6EA0A0J9YXQ4 647 aa17.23■□□□□ 0.35
SMAD2-204ENST00000585978 TGFB2P61812 414 aa17.23■□□□□ 0.35
SMAD2-204ENST00000585978 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
SMAD2-204ENST00000585978 MASTLQ96GX5 879 aa17.23■□□□□ 0.35
SMAD2-204ENST00000585978 ZNF594Q96JF6 807 aaPredicted RBP17.23■□□□□ 0.35
SMAD2-204ENST00000585978 NPR1P16066 1061 aa17.22■□□□□ 0.35
SMAD2-204ENST00000585978 ITGA6P23229 1130 aa17.22■□□□□ 0.35
SMAD2-204ENST00000585978 CEP85Q6P2H3 762 aa17.22■□□□□ 0.35
SMAD2-204ENST00000585978 PCDHB15Q9Y5E8 787 aa17.22■□□□□ 0.35
SMAD2-204ENST00000585978 A0A1B0GUL6 1792 aa17.21■□□□□ 0.35
SMAD2-204ENST00000585978 RTL9Q8NET4 1388 aa17.21■□□□□ 0.35
SMAD2-204ENST00000585978 HOXA10P31260 410 aaPredicted RBP17.21■□□□□ 0.35
SMAD2-204ENST00000585978 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.35
SMAD2-204ENST00000585978 OLFM4Q6UX06 510 aa17.21■□□□□ 0.35
SMAD2-204ENST00000585978 SIRT2Q8IXJ6 389 aa17.21■□□□□ 0.35
SMAD2-204ENST00000585978 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
SMAD2-204ENST00000585978 HSP90B1P14625 803 aaKnown RBP17.2■□□□□ 0.34
SMAD2-204ENST00000585978 STYK1Q6J9G0 422 aa17.2■□□□□ 0.34
SMAD2-204ENST00000585978 DDX46Q7L014 1031 aaKnown RBP17.2■□□□□ 0.34
SMAD2-204ENST00000585978 RBM17Q96I25 401 aaKnown RBP17.2■□□□□ 0.34
SMAD2-204ENST00000585978 PA2G4Q9UQ80 394 aaKnown RBP17.2■□□□□ 0.34
SMAD2-204ENST00000585978 LRRC37AA6NMS7 1700 aa17.19■□□□□ 0.34
SMAD2-204ENST00000585978 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
SMAD2-204ENST00000585978 ATP8B2P98198 1209 aa17.19■□□□□ 0.34
SMAD2-204ENST00000585978 MTX1Q13505 466 aa17.19■□□□□ 0.34
SMAD2-204ENST00000585978 GRAPQ13588 217 aa17.19■□□□□ 0.34
SMAD2-204ENST00000585978 PRPF40BQ6NWY9 871 aaKnown RBP17.19■□□□□ 0.34
SMAD2-204ENST00000585978 GRAPLQ8TC17 118 aaPredicted RBP17.19■□□□□ 0.34
SMAD2-204ENST00000585978 CRAMP1Q96RY5 1269 aa17.19■□□□□ 0.34
SMAD2-204ENST00000585978 PUS3Q9BZE2 481 aaKnown RBP17.19■□□□□ 0.34
SMAD2-204ENST00000585978 ARFGEF1Q9Y6D6 1849 aa17.19■□□□□ 0.34
SMAD2-204ENST00000585978 ANKRD18BA2A2Z9 1011 aa17.18■□□□□ 0.34
SMAD2-204ENST00000585978 IFIT5Q13325 482 aaKnown RBP17.18■□□□□ 0.34
SMAD2-204ENST00000585978 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
SMAD2-204ENST00000585978 POLA2Q14181 598 aa17.17■□□□□ 0.34
SMAD2-204ENST00000585978 CCDC57Q2TAC2 916 aa17.17■□□□□ 0.34
SMAD2-204ENST00000585978 PIM2Q9P1W9 311 aa17.17■□□□□ 0.34
SMAD2-204ENST00000585978 PDZRN3Q9UPQ7 1066 aa17.17■□□□□ 0.34
SMAD2-204ENST00000585978 PPEF1O14829 653 aaPredicted RBP17.16■□□□□ 0.34
SMAD2-204ENST00000585978 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
SMAD2-204ENST00000585978 LRRC24Q50LG9 513 aa17.16■□□□□ 0.34
SMAD2-204ENST00000585978 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
SMAD2-204ENST00000585978 TTLL6Q8N841 843 aa17.16■□□□□ 0.34
SMAD2-204ENST00000585978 CNKSR1Q969H4 720 aa17.16■□□□□ 0.34
SMAD2-204ENST00000585978 SIL1Q9H173 461 aa17.16■□□□□ 0.34
SMAD2-204ENST00000585978 CHMP4BQ9H444 224 aaKnown RBP17.16■□□□□ 0.34
SMAD2-204ENST00000585978 HDAC5Q9UQL6 1122 aa17.16■□□□□ 0.34
SMAD2-204ENST00000585978 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
SMAD2-204ENST00000585978 YBX3P16989 372 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMAD2-204ENST00000585978 TAF7LQ5H9L4 462 aa17.15■□□□□ 0.34
SMAD2-204ENST00000585978 SSH3Q8TE77 659 aa17.15■□□□□ 0.34
SMAD2-204ENST00000585978 C7orf43Q8WVR3 580 aa17.15■□□□□ 0.34
SMAD2-204ENST00000585978 CDC5LQ99459 802 aaKnown RBP17.15■□□□□ 0.34
SMAD2-204ENST00000585978 LTBP1Q14766 1721 aa17.14■□□□□ 0.33
SMAD2-204ENST00000585978 C21orf2O43822 256 aa17.14■□□□□ 0.33
SMAD2-204ENST00000585978 ALDH1B1P30837 517 aa17.14■□□□□ 0.33
SMAD2-204ENST00000585978 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
SMAD2-204ENST00000585978 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
SMAD2-204ENST00000585978 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
SMAD2-204ENST00000585978 WTIPA6NIX2 430 aaPredicted RBP17.13■□□□□ 0.33
SMAD2-204ENST00000585978 NEFLP07196 543 aa17.13■□□□□ 0.33
SMAD2-204ENST00000585978 IGHMBP2P38935 993 aaKnown RBP17.13■□□□□ 0.33
SMAD2-204ENST00000585978 RPAP2Q8IXW5 612 aaPredicted RBP17.13■□□□□ 0.33
SMAD2-204ENST00000585978 COPRSQ9NQ92 184 aa17.13■□□□□ 0.33
SMAD2-204ENST00000585978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.13■□□□□ 0.33
SMAD2-204ENST00000585978 FER1L6Q2WGJ9 1857 aa17.13■□□□□ 0.33
SMAD2-204ENST00000585978 DUOX1Q9NRD9 1551 aa17.12■□□□□ 0.33
SMAD2-204ENST00000585978 BBOX1O75936 387 aa17.12■□□□□ 0.33
SMAD2-204ENST00000585978 LDHAL6AQ6ZMR3 332 aa17.12■□□□□ 0.33
SMAD2-204ENST00000585978 ATG9AQ7Z3C6 839 aa17.12■□□□□ 0.33
SMAD2-204ENST00000585978 HELBQ8NG08 1087 aaPredicted RBP17.12■□□□□ 0.33
SMAD2-204ENST00000585978 MPHOSPH8Q99549 860 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms