RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 MBIPQ9NS73 344 aa29.88■■■□□ 2.37
LSM7-203ENST00000585409 PPIP5K2O43314 1243 aa29.87■■■□□ 2.37
LSM7-203ENST00000585409 AOC3Q16853 763 aa29.86■■■□□ 2.37
LSM7-203ENST00000585409 UTP14AQ9BVJ6 771 aaKnown RBP29.86■■■□□ 2.37
LSM7-203ENST00000585409 RTFDC1Q9BY42 306 aaPredicted RBP29.86■■■□□ 2.37
LSM7-203ENST00000585409 CST9Q5W186 159 aa29.85■■■□□ 2.37
LSM7-203ENST00000585409 MYH16Q9H6N6 1097 aa29.85■■■□□ 2.37
LSM7-203ENST00000585409 GPRC5DQ9NZD1 345 aa29.85■■■□□ 2.37
LSM7-203ENST00000585409 ABCC4O15439 1325 aa29.85■■■□□ 2.37
LSM7-203ENST00000585409 HOXB7P09629 217 aa29.84■■■□□ 2.37
LSM7-203ENST00000585409 PROSER3Q2NL68 480 aa29.84■■■□□ 2.37
LSM7-203ENST00000585409 CAPNS2Q96L46 248 aa29.84■■■□□ 2.37
LSM7-203ENST00000585409 TRAF5O00463 557 aa29.83■■■□□ 2.37
LSM7-203ENST00000585409 TMX4Q9H1E5 349 aaPredicted RBP29.83■■■□□ 2.37
LSM7-203ENST00000585409 ADARB2Q9NS39 739 aaKnown RBP29.83■■■□□ 2.37
LSM7-203ENST00000585409 ZNRF3Q9ULT6 936 aa29.83■■■□□ 2.37
LSM7-203ENST00000585409 EIF2S2P20042 333 aaKnown RBP29.82■■■□□ 2.36
LSM7-203ENST00000585409 ECE1P42892 770 aa29.82■■■□□ 2.36
LSM7-203ENST00000585409 CXCL9Q07325 125 aa29.82■■■□□ 2.36
LSM7-203ENST00000585409 SUPT20HQ8NEM7 779 aa29.82■■■□□ 2.36
LSM7-203ENST00000585409 TLL2Q9Y6L7 1015 aa29.81■■■□□ 2.36
LSM7-203ENST00000585409 BBOX1O75936 387 aa29.8■■■□□ 2.36
LSM7-203ENST00000585409 ANXA1P04083 346 aa29.8■■■□□ 2.36
LSM7-203ENST00000585409 GOLGA2Q08379 1002 aa29.8■■■□□ 2.36
LSM7-203ENST00000585409 TAF1P21675 1872 aa29.8■■■□□ 2.36
LSM7-203ENST00000585409 ZNF521Q96K83 1311 aa29.79■■■□□ 2.36
LSM7-203ENST00000585409 CYP4F22Q6NT55 531 aa29.79■■■□□ 2.36
LSM7-203ENST00000585409 SP8Q8IXZ3 490 aa29.79■■■□□ 2.36
LSM7-203ENST00000585409 NLRP10Q86W26 655 aa29.78■■■□□ 2.36
LSM7-203ENST00000585409 LRRC37AA6NMS7 1700 aa29.78■■■□□ 2.36
LSM7-203ENST00000585409 CDHR2Q9BYE9 1310 aa29.77■■■□□ 2.36
LSM7-203ENST00000585409 KIAA2012Q0VF49 1180 aa29.77■■■□□ 2.36
LSM7-203ENST00000585409 HSP90AB3PQ58FF7 597 aa29.77■■■□□ 2.36
LSM7-203ENST00000585409 DPP8Q6V1X1 898 aaPredicted RBP29.77■■■□□ 2.36
LSM7-203ENST00000585409 ABHD8Q96I13 439 aa29.77■■■□□ 2.36
LSM7-203ENST00000585409 GPR101Q96P66 508 aaPredicted RBP29.77■■■□□ 2.36
LSM7-203ENST00000585409 PGAP2Q9UHJ9 254 aa29.77■■■□□ 2.36
LSM7-203ENST00000585409 E9PSI1 815 aa29.76■■■□□ 2.35
LSM7-203ENST00000585409 GMPSP49915 693 aaPredicted RBP29.76■■■□□ 2.35
LSM7-203ENST00000585409 HNRNPUQ00839 825 aaKnown RBP eCLIP29.76■■■□□ 2.35
LSM7-203ENST00000585409 DUSP27Q5VZP5 1158 aa29.76■■■□□ 2.35
LSM7-203ENST00000585409 PAXIP1Q6ZW49 1069 aaPredicted RBP29.76■■■□□ 2.35
LSM7-203ENST00000585409 COPS6Q7L5N1 327 aa29.76■■■□□ 2.35
LSM7-203ENST00000585409 DUOX1Q9NRD9 1551 aa29.76■■■□□ 2.35
LSM7-203ENST00000585409 HCLS1P14317 486 aaPredicted RBP29.75■■■□□ 2.35
LSM7-203ENST00000585409 MPNDQ8N594 471 aa29.75■■■□□ 2.35
LSM7-203ENST00000585409 TSR2Q969E8 191 aaKnown RBP29.75■■■□□ 2.35
LSM7-203ENST00000585409 FANCIQ9NVI1 1328 aa29.74■■■□□ 2.35
LSM7-203ENST00000585409 DDX60Q8IY21 1712 aaKnown RBP29.74■■■□□ 2.35
LSM7-203ENST00000585409 TCIRG1Q13488 830 aa29.74■■■□□ 2.35
LSM7-203ENST00000585409 HDGFL1Q5TGJ6 251 aa29.74■■■□□ 2.35
LSM7-203ENST00000585409 CIAPIN1Q6FI81 312 aa29.74■■■□□ 2.35
LSM7-203ENST00000585409 XAGE3Q8WTP9 111 aa29.74■■■□□ 2.35
LSM7-203ENST00000585409 MAP2K2P36507 400 aa29.73■■■□□ 2.35
LSM7-203ENST00000585409 GRAPQ13588 217 aa29.73■■■□□ 2.35
LSM7-203ENST00000585409 SAPCD2Q86UD0 394 aa29.73■■■□□ 2.35
LSM7-203ENST00000585409 GRAPLQ8TC17 118 aaPredicted RBP29.73■■■□□ 2.35
LSM7-203ENST00000585409 BEGAINQ9BUH8 593 aa29.73■■■□□ 2.35
LSM7-203ENST00000585409 SH3TC1Q8TE82 1336 aa29.72■■■□□ 2.35
LSM7-203ENST00000585409 AIMP1Q12904 312 aaKnown RBP29.72■■■□□ 2.35
LSM7-203ENST00000585409 GRM1Q13255 1194 aa29.72■■■□□ 2.35
LSM7-203ENST00000585409 KRT24Q2M2I5 525 aa29.71■■■□□ 2.35
LSM7-203ENST00000585409 DDX46Q7L014 1031 aaKnown RBP29.71■■■□□ 2.35
LSM7-203ENST00000585409 ZC3H15Q8WU90 426 aaKnown RBP29.71■■■□□ 2.35
LSM7-203ENST00000585409 HHIPL1Q96JK4 782 aa29.71■■■□□ 2.35
LSM7-203ENST00000585409 TRMT112Q9UI30 125 aaKnown RBP29.71■■■□□ 2.35
LSM7-203ENST00000585409 CELF2O95319 508 aaKnown RBP29.7■■■□□ 2.35
LSM7-203ENST00000585409 HIRAP54198 1017 aaPredicted RBP29.7■■■□□ 2.35
LSM7-203ENST00000585409 TNIP1Q15025 636 aa29.7■■■□□ 2.35
LSM7-203ENST00000585409 NECTIN2Q92692 538 aa29.7■■■□□ 2.35
LSM7-203ENST00000585409 GLIS2Q9BZE0 524 aaPredicted RBP29.7■■■□□ 2.35
LSM7-203ENST00000585409 RAD17O75943 681 aa29.69■■■□□ 2.34
LSM7-203ENST00000585409 YDJCA8MPS7 323 aa29.68■■■□□ 2.34
LSM7-203ENST00000585409 ELL2O00472 640 aaPredicted RBP29.68■■■□□ 2.34
LSM7-203ENST00000585409 AOC2O75106 756 aa29.68■■■□□ 2.34
LSM7-203ENST00000585409 TWISTNBQ3B726 338 aaPredicted RBP29.68■■■□□ 2.34
LSM7-203ENST00000585409 CCDC30Q5VVM6 783 aa29.68■■■□□ 2.34
LSM7-203ENST00000585409 TMC4Q7Z404 712 aa29.68■■■□□ 2.34
LSM7-203ENST00000585409 C8orf58Q8NAV2 365 aa29.68■■■□□ 2.34
LSM7-203ENST00000585409 BCL2L13Q9BXK5 485 aa29.68■■■□□ 2.34
LSM7-203ENST00000585409 DBF4Q9UBU7 674 aaPredicted RBP29.68■■■□□ 2.34
LSM7-203ENST00000585409 TRPM4Q8TD43 1214 aa29.67■■■□□ 2.34
LSM7-203ENST00000585409 SLFN5Q08AF3 891 aa29.65■■■□□ 2.34
LSM7-203ENST00000585409 SPINK5Q9NQ38 1064 aaPredicted RBP29.65■■■□□ 2.34
LSM7-203ENST00000585409 CNOT7Q9UIV1 285 aaKnown RBP29.65■■■□□ 2.34
LSM7-203ENST00000585409 EXOSC9Q06265 439 aaKnown RBP29.64■■■□□ 2.34
LSM7-203ENST00000585409 CDC37L1Q7L3B6 337 aa29.64■■■□□ 2.34
LSM7-203ENST00000585409 STK31Q9BXU1 1019 aa29.64■■■□□ 2.34
LSM7-203ENST00000585409 CHPF2Q9P2E5 772 aa29.64■■■□□ 2.34
LSM7-203ENST00000585409 SHTN1A0MZ66 631 aa29.63■■■□□ 2.33
LSM7-203ENST00000585409 CA12O43570 354 aa29.63■■■□□ 2.33
LSM7-203ENST00000585409 HYPKQ9NX55 129 aa29.63■■■□□ 2.33
LSM7-203ENST00000585409 TSKSQ9UJT2 592 aa29.63■■■□□ 2.33
LSM7-203ENST00000585409 COL4A1P02462 1669 aa29.63■■■□□ 2.33
LSM7-203ENST00000585409 BRPF1P55201 1214 aaPredicted RBP29.62■■■□□ 2.33
LSM7-203ENST00000585409 PLBD2Q8NHP8 589 aa29.62■■■□□ 2.33
LSM7-203ENST00000585409 POLR2AP24928 1970 aaKnown RBP29.62■■■□□ 2.33
LSM7-203ENST00000585409 ZBED9Q6R2W3 1325 aa29.62■■■□□ 2.33
LSM7-203ENST00000585409 CASP8AP2Q9UKL3 1982 aa29.61■■■□□ 2.33
LSM7-203ENST00000585409 SF3B3Q15393 1217 aaKnown RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms