RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 FOXO4P98177 505 aa16.06■□□□□ 0.16
TRIM47-202ENST00000585333 MSL1Q68DK7 614 aa16.06■□□□□ 0.16
TRIM47-202ENST00000585333 NUTM1Q86Y26 1132 aa16.06■□□□□ 0.16
TRIM47-202ENST00000585333 ERC1Q8IUD2 1116 aa16.06■□□□□ 0.16
TRIM47-202ENST00000585333 MYH3P11055 1940 aa16.06■□□□□ 0.16
TRIM47-202ENST00000585333 TTLL11Q8NHH1 800 aa16.05■□□□□ 0.16
TRIM47-202ENST00000585333 RPGRQ92834 1020 aaKnown RBP16.05■□□□□ 0.16
TRIM47-202ENST00000585333 PCDHB15Q9Y5E8 787 aa16.05■□□□□ 0.16
TRIM47-202ENST00000585333 RAB11FIP3O75154 756 aa16.04■□□□□ 0.16
TRIM47-202ENST00000585333 HCLS1P14317 486 aaPredicted RBP16.04■□□□□ 0.16
TRIM47-202ENST00000585333 POLA2Q14181 598 aa16.04■□□□□ 0.16
TRIM47-202ENST00000585333 DDX46Q7L014 1031 aaKnown RBP16.04■□□□□ 0.16
TRIM47-202ENST00000585333 TMC4Q7Z404 712 aa16.04■□□□□ 0.16
TRIM47-202ENST00000585333 KAZALD1Q96I82 304 aa16.04■□□□□ 0.16
TRIM47-202ENST00000585333 SPON1Q9HCB6 807 aa16.04■□□□□ 0.16
TRIM47-202ENST00000585333 ABCC12Q96J65 1359 aa16.03■□□□□ 0.16
TRIM47-202ENST00000585333 IGHMBP2P38935 993 aaKnown RBP16.03■□□□□ 0.16
TRIM47-202ENST00000585333 RBM17Q96I25 401 aaKnown RBP16.03■□□□□ 0.16
TRIM47-202ENST00000585333 COPRSQ9NQ92 184 aa16.03■□□□□ 0.16
TRIM47-202ENST00000585333 KLRG2A4D1S0 409 aaPredicted RBP16.02■□□□□ 0.16
TRIM47-202ENST00000585333 ZBTB7AO95365 584 aa16.02■□□□□ 0.16
TRIM47-202ENST00000585333 ITGA6P23229 1130 aa16.02■□□□□ 0.16
TRIM47-202ENST00000585333 ALDH1B1P30837 517 aa16.02■□□□□ 0.16
TRIM47-202ENST00000585333 G3BP1Q13283 466 aaKnown RBP eCLIP16.02■□□□□ 0.16
TRIM47-202ENST00000585333 OS9Q13438 667 aaPredicted RBP16.02■□□□□ 0.16
TRIM47-202ENST00000585333 CRY2Q49AN0 593 aa16.02■□□□□ 0.16
TRIM47-202ENST00000585333 JARID2Q92833 1246 aaPredicted RBP16.02■□□□□ 0.16
TRIM47-202ENST00000585333 TMX4Q9H1E5 349 aaPredicted RBP16.02■□□□□ 0.16
TRIM47-202ENST00000585333 NOP58Q9Y2X3 529 aaKnown RBP16.02■□□□□ 0.16
TRIM47-202ENST00000585333 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.15
TRIM47-202ENST00000585333 PSDA5PKW4 1024 aaPredicted RBP16.01■□□□□ 0.15
TRIM47-202ENST00000585333 H0YIN7 160 aa16.01■□□□□ 0.15
TRIM47-202ENST00000585333 CIAO1O76071 339 aa16.01■□□□□ 0.15
TRIM47-202ENST00000585333 NPR1P16066 1061 aa16.01■□□□□ 0.15
TRIM47-202ENST00000585333 EPHA10Q5JZY3 1008 aa16.01■□□□□ 0.15
TRIM47-202ENST00000585333 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
TRIM47-202ENST00000585333 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
TRIM47-202ENST00000585333 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
TRIM47-202ENST00000585333 C10orf71Q711Q0 1435 aa16.01■□□□□ 0.15
TRIM47-202ENST00000585333 PNMA6EA0A0J9YXQ4 647 aa16■□□□□ 0.15
TRIM47-202ENST00000585333 SURF6O75683 361 aaKnown RBP16■□□□□ 0.15
TRIM47-202ENST00000585333 HOXA10P31260 410 aaPredicted RBP16■□□□□ 0.15
TRIM47-202ENST00000585333 IL15P40933 162 aaPredicted RBP16■□□□□ 0.15
TRIM47-202ENST00000585333 FAM161AQ3B820 660 aa16■□□□□ 0.15
TRIM47-202ENST00000585333 SMC5Q8IY18 1101 aa16■□□□□ 0.15
TRIM47-202ENST00000585333 SYNE4Q8N205 404 aa16■□□□□ 0.15
TRIM47-202ENST00000585333 CRAMP1Q96RY5 1269 aa16■□□□□ 0.15
TRIM47-202ENST00000585333 GREM2Q9H772 168 aa16■□□□□ 0.15
TRIM47-202ENST00000585333 BBOX1O75936 387 aa15.99■□□□□ 0.15
TRIM47-202ENST00000585333 TGFB2P61812 414 aa15.99■□□□□ 0.15
TRIM47-202ENST00000585333 STYK1Q6J9G0 422 aa15.99■□□□□ 0.15
TRIM47-202ENST00000585333 SIRT2Q8IXJ6 389 aa15.99■□□□□ 0.15
TRIM47-202ENST00000585333 KIF1BPQ96EK5 621 aa15.99■□□□□ 0.15
TRIM47-202ENST00000585333 MASTLQ96GX5 879 aa15.99■□□□□ 0.15
TRIM47-202ENST00000585333 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
TRIM47-202ENST00000585333 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
TRIM47-202ENST00000585333 EYA2O00167 538 aa15.98■□□□□ 0.15
TRIM47-202ENST00000585333 PTPN12Q05209 780 aaKnown RBP15.98■□□□□ 0.15
TRIM47-202ENST00000585333 GRAPQ13588 217 aa15.98■□□□□ 0.15
TRIM47-202ENST00000585333 LDHAL6AQ6ZMR3 332 aa15.98■□□□□ 0.15
TRIM47-202ENST00000585333 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
TRIM47-202ENST00000585333 CNKSR1Q969H4 720 aa15.98■□□□□ 0.15
TRIM47-202ENST00000585333 PDGFDQ9GZP0 370 aaPredicted RBP15.98■□□□□ 0.15
TRIM47-202ENST00000585333 CNNM1Q9NRU3 951 aa15.98■□□□□ 0.15
TRIM47-202ENST00000585333 MROH5Q6ZUA9 1318 aa15.97■□□□□ 0.15
TRIM47-202ENST00000585333 SRGNP10124 158 aa15.97■□□□□ 0.15
TRIM47-202ENST00000585333 RFX5P48382 616 aaPredicted RBP15.97■□□□□ 0.15
TRIM47-202ENST00000585333 RPS8P62241 208 aaKnown RBP15.97■□□□□ 0.15
TRIM47-202ENST00000585333 GRIPAP1Q4V328 841 aa15.97■□□□□ 0.15
TRIM47-202ENST00000585333 B4GALNT3Q6L9W6 998 aa15.97■□□□□ 0.15
TRIM47-202ENST00000585333 LRRCC1Q9C099 1032 aa15.97■□□□□ 0.15
TRIM47-202ENST00000585333 BSDC1Q9NW68 430 aaPredicted RBP15.97■□□□□ 0.15
TRIM47-202ENST00000585333 AKAP2Q9Y2D5 859 aa15.97■□□□□ 0.15
TRIM47-202ENST00000585333 KDM2BQ8NHM5 1336 aa15.96■□□□□ 0.15
TRIM47-202ENST00000585333 C2CD5Q86YS7 1000 aa15.96■□□□□ 0.15
TRIM47-202ENST00000585333 ANKRD2Q9GZV1 360 aa15.96■□□□□ 0.15
TRIM47-202ENST00000585333 SOGA3Q5TF21 947 aa15.95■□□□□ 0.14
TRIM47-202ENST00000585333 CC2D2BQ6DHV5 1058 aa15.95■□□□□ 0.14
TRIM47-202ENST00000585333 CLASRPQ8N2M8 674 aaKnown RBP15.95■□□□□ 0.14
TRIM47-202ENST00000585333 CCDC85AQ96PX6 553 aaPredicted RBP15.95■□□□□ 0.14
TRIM47-202ENST00000585333 SGIP1Q9BQI5 828 aa15.95■□□□□ 0.14
TRIM47-202ENST00000585333 GPR108Q9NPR9 543 aa15.95■□□□□ 0.14
TRIM47-202ENST00000585333 CEP126Q9P2H0 1117 aa15.95■□□□□ 0.14
TRIM47-202ENST00000585333 LRP5O75197 1615 aa15.94■□□□□ 0.14
TRIM47-202ENST00000585333 IGHDP01880 384 aa15.94■□□□□ 0.14
TRIM47-202ENST00000585333 GPATCH3Q96I76 525 aa15.94■□□□□ 0.14
TRIM47-202ENST00000585333 PPP1R1BQ9UD71 204 aaPredicted RBP15.94■□□□□ 0.14
TRIM47-202ENST00000585333 EXOC6BQ9Y2D4 811 aa15.94■□□□□ 0.14
TRIM47-202ENST00000585333 TNRC6CQ9HCJ0 1690 aaKnown RBP15.94■□□□□ 0.14
TRIM47-202ENST00000585333 KIF13BQ9NQT8 1826 aa15.94■□□□□ 0.14
TRIM47-202ENST00000585333 PTGER2P43116 358 aa15.93■□□□□ 0.14
TRIM47-202ENST00000585333 METTL24Q5JXM2 366 aa15.93■□□□□ 0.14
TRIM47-202ENST00000585333 ANKRD45Q5TZF3 282 aa15.93■□□□□ 0.14
TRIM47-202ENST00000585333 CCDC24Q8N4L8 307 aa15.93■□□□□ 0.14
TRIM47-202ENST00000585333 RHPN1Q8TCX5 695 aa15.93■□□□□ 0.14
TRIM47-202ENST00000585333 SIL1Q9H173 461 aa15.93■□□□□ 0.14
TRIM47-202ENST00000585333 NUCB1Q02818 461 aa15.92■□□□□ 0.14
TRIM47-202ENST00000585333 C3orf67Q6ZVT6 689 aa15.92■□□□□ 0.14
TRIM47-202ENST00000585333 CHD1LQ86WJ1 897 aa15.92■□□□□ 0.14
TRIM47-202ENST00000585333 ZNF622Q969S3 477 aaKnown RBP eCLIP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms