RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 RGL4Q8IZJ4 473 aa8.9□□□□□ -0.98
NF1-223ENST00000584328 IGFLR1Q9H665 355 aa8.9□□□□□ -0.98
NF1-223ENST00000584328 SEPT3Q9UH03 358 aa8.9□□□□□ -0.98
NF1-223ENST00000584328 RTCBQ9Y3I0 505 aaKnown RBP8.9□□□□□ -0.98
NF1-223ENST00000584328 FAM26DQ5JW98 314 aa8.89□□□□□ -0.99
NF1-223ENST00000584328 LINC00114Q6XXX2 140 aa8.89□□□□□ -0.99
NF1-223ENST00000584328 KRT25Q7Z3Z0 450 aa8.89□□□□□ -0.99
NF1-223ENST00000584328 UBE2OQ9C0C9 1292 aaKnown RBP8.89□□□□□ -0.99
NF1-223ENST00000584328 SSFA2P28290 1259 aa8.88□□□□□ -0.99
NF1-223ENST00000584328 SCNN1AP37088 669 aa8.88□□□□□ -0.99
NF1-223ENST00000584328 CMTR1Q8N1G2 835 aaKnown RBP8.88□□□□□ -0.99
NF1-223ENST00000584328 C11orf16Q9NQ32 467 aa8.88□□□□□ -0.99
NF1-223ENST00000584328 STIM2Q9P246 746 aa8.88□□□□□ -0.99
NF1-223ENST00000584328 PIK3R2O00459 728 aa8.87□□□□□ -0.99
NF1-223ENST00000584328 GNB5O14775 395 aa8.87□□□□□ -0.99
NF1-223ENST00000584328 FANCD2Q9BXW9 1451 aa8.87□□□□□ -0.99
NF1-223ENST00000584328 SASH3O75995 380 aa8.86□□□□□ -0.99
NF1-223ENST00000584328 TARSP26639 723 aaKnown RBP8.86□□□□□ -0.99
NF1-223ENST00000584328 KCTD17Q8N5Z5 321 aa8.86□□□□□ -0.99
NF1-223ENST00000584328 DNAJB12Q9NXW2 375 aaKnown RBP8.86□□□□□ -0.99
NF1-223ENST00000584328 ZFATQ9P243 1243 aa8.86□□□□□ -0.99
NF1-223ENST00000584328 STARD13Q9Y3M8 1113 aa8.86□□□□□ -0.99
NF1-223ENST00000584328 THOC2Q8NI27 1593 aaKnown RBP8.86□□□□□ -0.99
NF1-223ENST00000584328 M0R082 166 aa8.85□□□□□ -0.99
NF1-223ENST00000584328 XYLBO75191 536 aa8.85□□□□□ -0.99
NF1-223ENST00000584328 RARAP10276 462 aa8.85□□□□□ -0.99
NF1-223ENST00000584328 ABTB2Q8N961 1025 aa8.85□□□□□ -0.99
NF1-223ENST00000584328 ZNF417Q8TAU3 575 aa8.85□□□□□ -0.99
NF1-223ENST00000584328 ZNF587Q96SQ5 575 aaPredicted RBP8.85□□□□□ -0.99
NF1-223ENST00000584328 SUV39H2Q9H5I1 410 aa8.85□□□□□ -0.99
NF1-223ENST00000584328 SLC6A14Q9UN76 642 aa8.85□□□□□ -0.99
NF1-223ENST00000584328 USTQ9Y2C2 406 aa8.85□□□□□ -0.99
NF1-223ENST00000584328 KCNMB2Q9Y691 235 aa8.85□□□□□ -0.99
NF1-223ENST00000584328 ZBTB39O15060 712 aa8.84□□□□□ -0.99
NF1-223ENST00000584328 MAP3K6O95382 1288 aa8.84□□□□□ -0.99
NF1-223ENST00000584328 EGFRP00533 1210 aa8.84□□□□□ -0.99
NF1-223ENST00000584328 ALBP02768 609 aa8.84□□□□□ -0.99
NF1-223ENST00000584328 ZAP70P43403 619 aa8.84□□□□□ -0.99
NF1-223ENST00000584328 DCAF5Q96JK2 942 aa8.84□□□□□ -0.99
NF1-223ENST00000584328 FAM13BQ9NYF5 915 aa8.84□□□□□ -0.99
NF1-223ENST00000584328 ERCC6Q03468 1493 aa8.83□□□□□ -1
NF1-223ENST00000584328 CEP164Q9UPV0 1460 aa8.83□□□□□ -1
NF1-223ENST00000584328 PRDM2Q13029 1718 aa8.83□□□□□ -1
NF1-223ENST00000584328 COL8A1P27658 744 aa8.83□□□□□ -1
NF1-223ENST00000584328 PHLDB3Q6NSJ2 640 aa8.83□□□□□ -1
NF1-223ENST00000584328 DHX32Q7L7V1 743 aaKnown RBP8.83□□□□□ -1
NF1-223ENST00000584328 MICALL1Q8N3F8 863 aa8.83□□□□□ -1
NF1-223ENST00000584328 HELQQ8TDG4 1101 aa8.83□□□□□ -1
NF1-223ENST00000584328 PIK3R5Q8WYR1 880 aa8.83□□□□□ -1
NF1-223ENST00000584328 KIF21AQ7Z4S6 1674 aa8.83□□□□□ -1
NF1-223ENST00000584328 WDR62O43379 1518 aa8.82□□□□□ -1
NF1-223ENST00000584328 C8orf86Q6ZUL3 223 aa8.82□□□□□ -1
NF1-223ENST00000584328 GPR152Q8TDT2 470 aa8.82□□□□□ -1
NF1-223ENST00000584328 GTF3C2Q8WUA4 911 aaPredicted RBP8.82□□□□□ -1
NF1-223ENST00000584328 TRIM11Q96F44 468 aa8.82□□□□□ -1
NF1-223ENST00000584328 NOP53Q9NZM5 478 aaKnown RBP8.82□□□□□ -1
NF1-223ENST00000584328 MRC2Q9UBG0 1479 aa8.82□□□□□ -1
NF1-223ENST00000584328 TRIP4Q15650 581 aaPredicted RBP8.81□□□□□ -1
NF1-223ENST00000584328 PCSK7Q16549 785 aa8.81□□□□□ -1
NF1-223ENST00000584328 C20orf204Q6ZNR8 217 aa8.81□□□□□ -1
NF1-223ENST00000584328 PLVAPQ9BX97 442 aa8.81□□□□□ -1
NF1-223ENST00000584328 PRDM6Q9NQX0 595 aa8.81□□□□□ -1
NF1-223ENST00000584328 UBAP1LF5GYI3 381 aa8.8□□□□□ -1
NF1-223ENST00000584328 MLLT1Q03111 559 aaPredicted RBP8.8□□□□□ -1
NF1-223ENST00000584328 FAM35AQ86V20 835 aa8.8□□□□□ -1
NF1-223ENST00000584328 ALYREFQ86V81 257 aaKnown RBP8.8□□□□□ -1
NF1-223ENST00000584328 NAGPAQ9UK23 515 aa8.8□□□□□ -1
NF1-223ENST00000584328 MTMR7Q9Y216 660 aa8.8□□□□□ -1
NF1-223ENST00000584328 CUX2O14529 1486 aa8.8□□□□□ -1
NF1-223ENST00000584328 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
NF1-223ENST00000584328 ZBTB42B2RXF5 422 aa8.79□□□□□ -1
NF1-223ENST00000584328 LILRB5O75023 590 aa8.79□□□□□ -1
NF1-223ENST00000584328 ARID4AP29374 1257 aaPredicted RBP8.79□□□□□ -1
NF1-223ENST00000584328 MTMR3Q13615 1198 aa8.79□□□□□ -1
NF1-223ENST00000584328 PSAPL1Q6NUJ1 521 aa8.79□□□□□ -1
NF1-223ENST00000584328 NLRP13Q86W25 1043 aa8.79□□□□□ -1
NF1-223ENST00000584328 ATCAYQ86WG3 371 aa8.79□□□□□ -1
NF1-223ENST00000584328 RETREG2Q8NC44 543 aa8.79□□□□□ -1
NF1-223ENST00000584328 TRPM4Q8TD43 1214 aa8.79□□□□□ -1
NF1-223ENST00000584328 NUDT8Q8WV74 236 aa8.79□□□□□ -1
NF1-223ENST00000584328 JPH1Q9HDC5 661 aaPredicted RBP8.79□□□□□ -1
NF1-223ENST00000584328 TLR7Q9NYK1 1049 aaKnown RBP8.79□□□□□ -1
NF1-223ENST00000584328 MMP20O60882 483 aa8.78□□□□□ -1
NF1-223ENST00000584328 CPB1P15086 417 aa8.78□□□□□ -1
NF1-223ENST00000584328 GPLD1P80108 840 aa8.78□□□□□ -1
NF1-223ENST00000584328 COL9A3Q14050 684 aaPredicted RBP8.78□□□□□ -1
NF1-223ENST00000584328 B4GALNT3Q6L9W6 998 aa8.78□□□□□ -1
NF1-223ENST00000584328 GPAT2Q6NUI2 795 aa8.78□□□□□ -1
NF1-223ENST00000584328 FNDC3AQ9Y2H6 1198 aaKnown RBP8.78□□□□□ -1
NF1-223ENST00000584328 KRBA1A5PL33 1030 aa8.77□□□□□ -1.01
NF1-223ENST00000584328 RGS9O75916 674 aaPredicted RBP8.77□□□□□ -1.01
NF1-223ENST00000584328 PSAPP07602 524 aa8.77□□□□□ -1.01
NF1-223ENST00000584328 MPSTP25325 297 aa8.77□□□□□ -1.01
NF1-223ENST00000584328 NRLP54845 237 aa8.77□□□□□ -1.01
NF1-223ENST00000584328 PLA2G4EQ3MJ16 856 aa8.77□□□□□ -1.01
NF1-223ENST00000584328 NOM1Q5C9Z4 860 aaKnown RBP8.77□□□□□ -1.01
NF1-223ENST00000584328 SPDYE3A6NKU9 549 aa8.76□□□□□ -1.01
NF1-223ENST00000584328 ABL1P00519 1130 aa8.76□□□□□ -1.01
NF1-223ENST00000584328 NID1P14543 1247 aa8.76□□□□□ -1.01
NF1-223ENST00000584328 PLAURQ03405 335 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms