RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 TBC1D9BQ66K14 1250 aa10.45□□□□□ -0.74
GGA3-218ENST00000584243 RTKN2Q8IZC4 609 aa10.45□□□□□ -0.74
GGA3-218ENST00000584243 P2RX7Q99572 595 aaKnown RBP10.45□□□□□ -0.74
GGA3-218ENST00000584243 NCAPD2Q15021 1401 aa10.44□□□□□ -0.74
GGA3-218ENST00000584243 MYCP01106 439 aaPredicted RBP10.44□□□□□ -0.74
GGA3-218ENST00000584243 GMPSP49915 693 aaPredicted RBP10.44□□□□□ -0.74
GGA3-218ENST00000584243 RRP1P56182 461 aaKnown RBP10.44□□□□□ -0.74
GGA3-218ENST00000584243 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
GGA3-218ENST00000584243 PSMD1Q99460 953 aa10.44□□□□□ -0.74
GGA3-218ENST00000584243 GDF15Q99988 308 aa10.44□□□□□ -0.74
GGA3-218ENST00000584243 RNF216Q9NWF9 866 aaPredicted RBP10.44□□□□□ -0.74
GGA3-218ENST00000584243 CHD8Q9HCK8 2581 aa10.43□□□□□ -0.74
GGA3-218ENST00000584243 RTL1A6NKG5 1358 aa10.43□□□□□ -0.74
GGA3-218ENST00000584243 POTEB2H3BUK9 544 aa10.43□□□□□ -0.74
GGA3-218ENST00000584243 BMP8BP34820 402 aa10.43□□□□□ -0.74
GGA3-218ENST00000584243 SLC4A8Q2Y0W8 1093 aa10.43□□□□□ -0.74
GGA3-218ENST00000584243 ANP32EQ9BTT0 268 aa10.43□□□□□ -0.74
GGA3-218ENST00000584243 ZBTB12Q9Y330 459 aaPredicted RBP10.43□□□□□ -0.74
GGA3-218ENST00000584243 A0A1W2PP64 1363 aa10.42□□□□□ -0.74
GGA3-218ENST00000584243 IRS2Q9Y4H2 1338 aa10.42□□□□□ -0.74
GGA3-218ENST00000584243 MS4A1P11836 297 aa10.42□□□□□ -0.74
GGA3-218ENST00000584243 MAFAQ8NHW3 353 aaPredicted RBP10.42□□□□□ -0.74
GGA3-218ENST00000584243 CD99L2Q8TCZ2 262 aa10.42□□□□□ -0.74
GGA3-218ENST00000584243 NR2E3Q9Y5X4 410 aa10.42□□□□□ -0.74
GGA3-218ENST00000584243 KDM3BQ7LBC6 1761 aa10.42□□□□□ -0.74
GGA3-218ENST00000584243 EGFRP00533 1210 aa10.41□□□□□ -0.74
GGA3-218ENST00000584243 PPP2R1AP30153 589 aa10.41□□□□□ -0.74
GGA3-218ENST00000584243 CXCL9Q07325 125 aa10.41□□□□□ -0.74
GGA3-218ENST00000584243 TJAP1Q5JTD0 557 aa10.41□□□□□ -0.74
GGA3-218ENST00000584243 KRT26Q7Z3Y9 468 aa10.41□□□□□ -0.74
GGA3-218ENST00000584243 FAM161BQ96MY7 647 aa10.41□□□□□ -0.74
GGA3-218ENST00000584243 POLR2AP24928 1970 aaKnown RBP10.41□□□□□ -0.74
GGA3-218ENST00000584243 UNC79Q9P2D8 2635 aa10.4□□□□□ -0.74
GGA3-218ENST00000584243 EVC2Q86UK5 1308 aa10.4□□□□□ -0.74
GGA3-218ENST00000584243 TCERG1O14776 1098 aaKnown RBP10.4□□□□□ -0.74
GGA3-218ENST00000584243 RRS1Q15050 365 aaKnown RBP10.4□□□□□ -0.74
GGA3-218ENST00000584243 MOB2Q70IA6 237 aa10.4□□□□□ -0.74
GGA3-218ENST00000584243 DNAJC10Q8IXB1 793 aa10.4□□□□□ -0.74
GGA3-218ENST00000584243 ZBTB1Q9Y2K1 713 aa10.4□□□□□ -0.74
GGA3-218ENST00000584243 MRE11P49959 708 aa10.39□□□□□ -0.75
GGA3-218ENST00000584243 GOLGA2Q08379 1002 aa10.39□□□□□ -0.75
GGA3-218ENST00000584243 HSP90AB2PQ58FF8 381 aa10.39□□□□□ -0.75
GGA3-218ENST00000584243 CC2D1BQ5T0F9 858 aaKnown RBP10.39□□□□□ -0.75
GGA3-218ENST00000584243 ERICH6Q7L0X2 663 aa10.39□□□□□ -0.75
GGA3-218ENST00000584243 IFNL2Q8IZJ0 200 aa10.39□□□□□ -0.75
GGA3-218ENST00000584243 LARGE2Q8N3Y3 721 aa10.39□□□□□ -0.75
GGA3-218ENST00000584243 CFAP53Q96M91 514 aa10.39□□□□□ -0.75
GGA3-218ENST00000584243 SPG7Q9UQ90 795 aa10.39□□□□□ -0.75
GGA3-218ENST00000584243 PTCH2Q9Y6C5 1203 aa10.39□□□□□ -0.75
GGA3-218ENST00000584243 EDC4Q6P2E9 1401 aaKnown RBP10.39□□□□□ -0.75
GGA3-218ENST00000584243 CACNA1BQ00975 2339 aa10.39□□□□□ -0.75
GGA3-218ENST00000584243 KLRG2A4D1S0 409 aaPredicted RBP10.38□□□□□ -0.75
GGA3-218ENST00000584243 ERVV-2B6SEH9 535 aa10.38□□□□□ -0.75
GGA3-218ENST00000584243 E9PSI1 815 aa10.38□□□□□ -0.75
GGA3-218ENST00000584243 NPR1P16066 1061 aa10.38□□□□□ -0.75
GGA3-218ENST00000584243 FAM109BQ6ICB4 259 aaPredicted RBP10.38□□□□□ -0.75
GGA3-218ENST00000584243 HTATIP2Q9BUP3 242 aa10.38□□□□□ -0.75
GGA3-218ENST00000584243 EFCC1Q9HA90 598 aa10.38□□□□□ -0.75
GGA3-218ENST00000584243 HCN4Q9Y3Q4 1203 aa10.38□□□□□ -0.75
GGA3-218ENST00000584243 SCN7AQ01118 1682 aa10.38□□□□□ -0.75
GGA3-218ENST00000584243 CDHR2Q9BYE9 1310 aa10.37□□□□□ -0.75
GGA3-218ENST00000584243 ZDBF2Q9HCK1 2354 aa10.37□□□□□ -0.75
GGA3-218ENST00000584243 ZBTB22O15209 634 aa10.37□□□□□ -0.75
GGA3-218ENST00000584243 CYP19A1P11511 503 aaPredicted RBP10.37□□□□□ -0.75
GGA3-218ENST00000584243 ANP32AP39687 249 aaKnown RBP10.37□□□□□ -0.75
GGA3-218ENST00000584243 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
GGA3-218ENST00000584243 SLC9C1Q4G0N8 1177 aa10.37□□□□□ -0.75
GGA3-218ENST00000584243 CNBD1Q8NA66 436 aa10.37□□□□□ -0.75
GGA3-218ENST00000584243 COL26A1Q96A83 441 aa10.37□□□□□ -0.75
GGA3-218ENST00000584243 CDCA5Q96FF9 252 aa10.37□□□□□ -0.75
GGA3-218ENST00000584243 CDX2Q99626 313 aaPredicted RBP10.37□□□□□ -0.75
GGA3-218ENST00000584243 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
GGA3-218ENST00000584243 ZNF521Q96K83 1311 aa10.36□□□□□ -0.75
GGA3-218ENST00000584243 SAMD7Q7Z3H4 446 aa10.36□□□□□ -0.75
GGA3-218ENST00000584243 SH3TC2Q8TF17 1288 aa10.36□□□□□ -0.75
GGA3-218ENST00000584243 LRFN3Q9BTN0 628 aa10.36□□□□□ -0.75
GGA3-218ENST00000584243 PNNQ9H307 717 aaKnown RBP10.36□□□□□ -0.75
GGA3-218ENST00000584243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.757e-6■■□□□ 12.8
GGA3-218ENST00000584243 ALPK3Q96L96 1907 aa10.36□□□□□ -0.75
GGA3-218ENST00000584243 COL2A1P02458 1487 aaPredicted RBP10.36□□□□□ -0.75
GGA3-218ENST00000584243 CT47B1P0C2W7 299 aaPredicted RBP10.35□□□□□ -0.75
GGA3-218ENST00000584243 TDHQ8IZJ6 230 aa10.35□□□□□ -0.75
GGA3-218ENST00000584243 ERO1AQ96HE7 468 aa10.35□□□□□ -0.75
GGA3-218ENST00000584243 CNOT7Q9UIV1 285 aaKnown RBP10.35□□□□□ -0.75
GGA3-218ENST00000584243 CFAP54Q96N23 3096 aa10.35□□□□□ -0.75
GGA3-218ENST00000584243 USP34Q70CQ2 3546 aa10.35□□□□□ -0.75
GGA3-218ENST00000584243 SSC5DA1L4H1 1573 aa10.35□□□□□ -0.75
GGA3-218ENST00000584243 ASTN2O75129 1339 aaPredicted RBP10.34□□□□□ -0.75
GGA3-218ENST00000584243 KMT2BQ9UMN6 2715 aaPredicted RBP10.34□□□□□ -0.75
GGA3-218ENST00000584243 MTFR1Q15390 333 aa10.34□□□□□ -0.75
GGA3-218ENST00000584243 CCDC27Q2M243 656 aa10.34□□□□□ -0.75
GGA3-218ENST00000584243 B4GALNT3Q6L9W6 998 aa10.34□□□□□ -0.75
GGA3-218ENST00000584243 NIM1KQ8IY84 436 aa10.34□□□□□ -0.75
GGA3-218ENST00000584243 SPTBN4Q9H254 2564 aa10.33□□□□□ -0.76
GGA3-218ENST00000584243 IRX6P78412 446 aaPredicted RBP10.33□□□□□ -0.76
GGA3-218ENST00000584243 NBPF11Q86T75 865 aa10.33□□□□□ -0.76
GGA3-218ENST00000584243 MICALL2Q8IY33 904 aa10.33□□□□□ -0.76
GGA3-218ENST00000584243 USP38Q8NB14 1042 aa10.33□□□□□ -0.76
GGA3-218ENST00000584243 C1QTNF1Q9BXJ1 281 aa10.33□□□□□ -0.76
GGA3-218ENST00000584243 ADAMTS8Q9UP79 889 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms