RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	LRRC37A	A6NMS7	1700 aa		11.57	□□□□□ -0.56
NUP85-223	ENST00000583877	DDX60	Q8IY21	1712 aa	Known RBP	11.57	□□□□□ -0.56
NUP85-223	ENST00000583877	PPIP5K2	O43314	1243 aa		11.57	□□□□□ -0.56
NUP85-223	ENST00000583877	NTSR2	O95665	410 aa		11.57	□□□□□ -0.56
NUP85-223	ENST00000583877	MYL6B	P14649	208 aa		11.57	□□□□□ -0.56
NUP85-223	ENST00000583877	RGS19	P49795	217 aa		11.57	□□□□□ -0.56
NUP85-223	ENST00000583877	EIF4A1	P60842	406 aa	Known RBP	11.57	□□□□□ -0.56
NUP85-223	ENST00000583877	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.57	□□□□□ -0.56
NUP85-223	ENST00000583877	TMX4	Q9H1E5	349 aa	Predicted RBP	11.57	□□□□□ -0.56
NUP85-223	ENST00000583877	ZBTB3	Q9H5J0	574 aa		11.57	□□□□□ -0.56
NUP85-223	ENST00000583877	CCDC85C	A6NKD9	419 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	TCERG1	O14776	1098 aa	Known RBP	11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	CA12	O43570	354 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	NEFM	P07197	916 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	MLLT1	Q03111	559 aa	Predicted RBP	11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	GRM1	Q13255	1194 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	AOC3	Q16853	763 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	PARP10	Q53GL7	1025 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	PPP1R42	Q7Z4L9	355 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	SAPCD2	Q86UD0	394 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	SLC51A	Q86UW1	340 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	HHIPL1	Q96JK4	782 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	NLRP3	Q96P20	1036 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	ZNRF3	Q9ULT6	936 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	ATP6V0A2	Q9Y487	856 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	ERBB4	Q15303	1308 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	CDHR2	Q9BYE9	1310 aa		11.56	□□□□□ -0.56
NUP85-223	ENST00000583877	AOC2	O75106	756 aa		11.55	□□□□□ -0.56
NUP85-223	ENST00000583877	SLC10A5	Q5PT55	438 aa		11.55	□□□□□ -0.56
NUP85-223	ENST00000583877	C3orf67	Q6ZVT6	689 aa		11.55	□□□□□ -0.56
NUP85-223	ENST00000583877	SUPT20H	Q8NEM7	779 aa		11.55	□□□□□ -0.56
NUP85-223	ENST00000583877	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.55	□□□□□ -0.56
NUP85-223	ENST00000583877	PGAP2	Q9UHJ9	254 aa		11.55	□□□□□ -0.56
NUP85-223	ENST00000583877	PSME4	Q14997	1843 aa		11.55	□□□□□ -0.56
NUP85-223	ENST00000583877	CELF2	O95319	508 aa	Known RBP	11.54	□□□□□ -0.56
NUP85-223	ENST00000583877	CXCL9	Q07325	125 aa		11.54	□□□□□ -0.56
NUP85-223	ENST00000583877	ZC3H15	Q8WU90	426 aa	Known RBP	11.54	□□□□□ -0.56
NUP85-223	ENST00000583877	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.54	□□□□□ -0.56
NUP85-223	ENST00000583877	ABCC4	O15439	1325 aa		11.54	□□□□□ -0.56
NUP85-223	ENST00000583877	BBOX1	O75936	387 aa		11.53	□□□□□ -0.56
NUP85-223	ENST00000583877	GMPS	P49915	693 aa	Predicted RBP	11.53	□□□□□ -0.56
NUP85-223	ENST00000583877	BRPF1	P55201	1214 aa	Predicted RBP	11.53	□□□□□ -0.56
NUP85-223	ENST00000583877	DPP8	Q6V1X1	898 aa	Predicted RBP	11.53	□□□□□ -0.56
NUP85-223	ENST00000583877	UTP14A	Q9BVJ6	771 aa	Known RBP	11.53	□□□□□ -0.56
NUP85-223	ENST00000583877	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.53	□□□□□ -0.56
NUP85-223	ENST00000583877	TSKS	Q9UJT2	592 aa		11.53	□□□□□ -0.56
NUP85-223	ENST00000583877	DUOX1	Q9NRD9	1551 aa		11.53	□□□□□ -0.56
NUP85-223	ENST00000583877	SCN9A	Q15858	1988 aa		11.52	□□□□□ -0.56
NUP85-223	ENST00000583877	KIAA2012	Q0VF49	1180 aa		11.52	□□□□□ -0.57
NUP85-223	ENST00000583877	TNIP1	Q15025	636 aa		11.52	□□□□□ -0.57
NUP85-223	ENST00000583877	NFE2L2	Q16236	605 aa		11.52	□□□□□ -0.57
NUP85-223	ENST00000583877	CIAPIN1	Q6FI81	312 aa		11.52	□□□□□ -0.57
NUP85-223	ENST00000583877	LRP10	Q7Z4F1	713 aa		11.52	□□□□□ -0.57
NUP85-223	ENST00000583877	SP8	Q8IXZ3	490 aa		11.52	□□□□□ -0.57
NUP85-223	ENST00000583877	MPND	Q8N594	471 aa		11.52	□□□□□ -0.57
NUP85-223	ENST00000583877	PLEKHF1	Q96S99	279 aa		11.52	□□□□□ -0.57
NUP85-223	ENST00000583877	HIRA	P54198	1017 aa	Predicted RBP	11.51	□□□□□ -0.57
NUP85-223	ENST00000583877	PDIA6	Q15084	440 aa		11.51	□□□□□ -0.57
NUP85-223	ENST00000583877	CDC37L1	Q7L3B6	337 aa		11.51	□□□□□ -0.57
NUP85-223	ENST00000583877	THUMPD2	Q9BTF0	503 aa	Known RBP	11.51	□□□□□ -0.57
NUP85-223	ENST00000583877	BCL2L13	Q9BXK5	485 aa		11.51	□□□□□ -0.57
NUP85-223	ENST00000583877	MCOLN1	Q9GZU1	580 aa		11.51	□□□□□ -0.57
NUP85-223	ENST00000583877	RAD17	O75943	681 aa		11.5	□□□□□ -0.57
NUP85-223	ENST00000583877	NOG	Q13253	232 aa		11.5	□□□□□ -0.57
NUP85-223	ENST00000583877	PNN	Q9H307	717 aa	Known RBP	11.5	□□□□□ -0.57
NUP85-223	ENST00000583877	CNOT7	Q9UIV1	285 aa	Known RBP	11.5	□□□□□ -0.57
NUP85-223	ENST00000583877		H7C1D1	291 aa		11.49	□□□□□ -0.57
NUP85-223	ENST00000583877	HSP90AB3P	Q58FF7	597 aa		11.49	□□□□□ -0.57
NUP85-223	ENST00000583877	DDX46	Q7L014	1031 aa	Known RBP	11.49	□□□□□ -0.57
NUP85-223	ENST00000583877	TRPM4	Q8TD43	1214 aa		11.49	□□□□□ -0.57
NUP85-223	ENST00000583877	ZNF408	Q9H9D4	720 aa		11.49	□□□□□ -0.57
NUP85-223	ENST00000583877	TSPYL4	Q9UJ04	414 aa		11.49	□□□□□ -0.57
NUP85-223	ENST00000583877	MAPK8IP3	Q9UPT6	1336 aa		11.49	□□□□□ -0.57
NUP85-223	ENST00000583877	YDJC	A8MPS7	323 aa		11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	HCLS1	P14317	486 aa	Predicted RBP	11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	EIF2S2	P20042	333 aa	Known RBP	11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	DGKZ	Q13574	1117 aa		11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	GRAP	Q13588	217 aa		11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	PROSER3	Q2NL68	480 aa		11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	TMC4	Q7Z404	712 aa		11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	NLRP10	Q86W26	655 aa		11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	GRAPL	Q8TC17	118 aa	Predicted RBP	11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	CFAP44	Q96MT7	982 aa		11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	BABAM1	Q9NWV8	329 aa		11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	MYH3	P11055	1940 aa		11.48	□□□□□ -0.57
NUP85-223	ENST00000583877	SH3TC1	Q8TE82	1336 aa		11.47	□□□□□ -0.57
NUP85-223	ENST00000583877	ANXA1	P04083	346 aa		11.47	□□□□□ -0.57
NUP85-223	ENST00000583877	HUNK	P57058	714 aa		11.47	□□□□□ -0.57
NUP85-223	ENST00000583877	USP48	Q86UV5	1035 aa		11.47	□□□□□ -0.57
NUP85-223	ENST00000583877	MICALL2	Q8IY33	904 aa		11.47	□□□□□ -0.57
NUP85-223	ENST00000583877	DPF2	Q92785	391 aa		11.47	□□□□□ -0.57
NUP85-223	ENST00000583877	PCDH10	Q9P2E7	1040 aa		11.47	□□□□□ -0.57
NUP85-223	ENST00000583877	TRMT112	Q9UI30	125 aa	Known RBP	11.47	□□□□□ -0.57
NUP85-223	ENST00000583877	SHTN1	A0MZ66	631 aa		11.46	□□□□□ -0.57
NUP85-223	ENST00000583877	TCIRG1	Q13488	830 aa		11.46	□□□□□ -0.57
NUP85-223	ENST00000583877	COPS6	Q7L5N1	327 aa		11.46	□□□□□ -0.57
NUP85-223	ENST00000583877	XAGE3	Q8WTP9	111 aa		11.46	□□□□□ -0.57
NUP85-223	ENST00000583877	BBX	Q8WY36	941 aa	Predicted RBP	11.46	□□□□□ -0.57
NUP85-223	ENST00000583877	ZIC5	Q96T25	663 aa		11.46	□□□□□ -0.57

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