RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 TMC4Q7Z404 712 aa14.81□□□□□ -0.04
CASC3-208ENST00000583649 CFAP53Q96M91 514 aa14.81□□□□□ -0.04
CASC3-208ENST00000583649 CSRNP1Q96S65 589 aa14.81□□□□□ -0.04
CASC3-208ENST00000583649 NUDCQ9Y266 331 aa14.81□□□□□ -0.04
CASC3-208ENST00000583649 HSPA5P11021 654 aaKnown RBP14.8□□□□□ -0.04
CASC3-208ENST00000583649 HTATSF1O43719 755 aaKnown RBP14.79□□□□□ -0.04
CASC3-208ENST00000583649 FKBP1BP68106 108 aa14.79□□□□□ -0.04
CASC3-208ENST00000583649 TAF7Q15545 349 aaPredicted RBP14.79□□□□□ -0.04
CASC3-208ENST00000583649 SUSD4Q5VX71 490 aa14.79□□□□□ -0.04
CASC3-208ENST00000583649 FBXO46Q6PJ61 603 aaPredicted RBP14.79□□□□□ -0.04
CASC3-208ENST00000583649 DDX46Q7L014 1031 aaKnown RBP14.79□□□□□ -0.04
CASC3-208ENST00000583649 PNISRQ8TF01 805 aaKnown RBP14.79□□□□□ -0.04
CASC3-208ENST00000583649 UTP14AQ9BVJ6 771 aaKnown RBP14.79□□□□□ -0.04
CASC3-208ENST00000583649 AKAP11Q9UKA4 1901 aa14.78□□□□□ -0.04
CASC3-208ENST00000583649 NEFMP07197 916 aa14.78□□□□□ -0.04
CASC3-208ENST00000583649 PRKAR2BP31323 418 aa14.78□□□□□ -0.04
CASC3-208ENST00000583649 TBC1D10BQ4KMP7 808 aaPredicted RBP14.78□□□□□ -0.04
CASC3-208ENST00000583649 CC2D1BQ5T0F9 858 aaKnown RBP14.78□□□□□ -0.04
CASC3-208ENST00000583649 RRP7AQ9Y3A4 280 aaKnown RBP14.78□□□□□ -0.04
CASC3-208ENST00000583649 ABCC4O15439 1325 aa14.77□□□□□ -0.04
CASC3-208ENST00000583649 WASHC4Q2M389 1173 aa14.77□□□□□ -0.05
CASC3-208ENST00000583649 RBM26Q5T8P6 1007 aaKnown RBP14.77□□□□□ -0.05
CASC3-208ENST00000583649 INTS3Q68E01 1043 aaKnown RBP14.77□□□□□ -0.05
CASC3-208ENST00000583649 MCM10Q7L590 875 aa14.77□□□□□ -0.05
CASC3-208ENST00000583649 SAMD7Q7Z3H4 446 aa14.77□□□□□ -0.05
CASC3-208ENST00000583649 ZBTB3Q9H5J0 574 aa14.77□□□□□ -0.05
CASC3-208ENST00000583649 NTSR2O95665 410 aa14.76□□□□□ -0.05
CASC3-208ENST00000583649 NOM1Q5C9Z4 860 aaKnown RBP14.76□□□□□ -0.05
CASC3-208ENST00000583649 SLC10A5Q5PT55 438 aa14.76□□□□□ -0.05
CASC3-208ENST00000583649 GIGYF2Q6Y7W6 1299 aaKnown RBP14.76□□□□□ -0.05
CASC3-208ENST00000583649 ZNF34Q8IZ26 560 aa14.76□□□□□ -0.05
CASC3-208ENST00000583649 ZNF296Q8WUU4 475 aaPredicted RBP14.76□□□□□ -0.05
CASC3-208ENST00000583649 UBN2Q6ZU65 1347 aa14.75□□□□□ -0.05
CASC3-208ENST00000583649 ADM5C9JUS6 153 aa14.75□□□□□ -0.05
CASC3-208ENST00000583649 G3V3G9 751 aa14.75□□□□□ -0.05
CASC3-208ENST00000583649 MYL6BP14649 208 aa14.75□□□□□ -0.05
CASC3-208ENST00000583649 KIF4BQ2VIQ3 1234 aa14.75□□□□□ -0.05
CASC3-208ENST00000583649 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
CASC3-208ENST00000583649 PHACTR3Q96KR7 559 aa14.75□□□□□ -0.05
CASC3-208ENST00000583649 EYA3Q99504 573 aa14.75□□□□□ -0.05
CASC3-208ENST00000583649 ZBTB12Q9Y330 459 aaPredicted RBP14.75□□□□□ -0.05
CASC3-208ENST00000583649 PSMD14O00487 310 aa14.74□□□□□ -0.05
CASC3-208ENST00000583649 SREBF2Q12772 1141 aa14.74□□□□□ -0.05
CASC3-208ENST00000583649 GRAPQ13588 217 aa14.74□□□□□ -0.05
CASC3-208ENST00000583649 HSP90AB3PQ58FF7 597 aa14.74□□□□□ -0.05
CASC3-208ENST00000583649 RASAL3Q86YV0 1011 aa14.74□□□□□ -0.05
CASC3-208ENST00000583649 GRAPLQ8TC17 118 aaPredicted RBP14.74□□□□□ -0.05
CASC3-208ENST00000583649 ERBB4Q15303 1308 aa14.73□□□□□ -0.05
CASC3-208ENST00000583649 TTLL7Q6ZT98 887 aa14.73□□□□□ -0.05
CASC3-208ENST00000583649 CDCA5Q96FF9 252 aa14.73□□□□□ -0.05
CASC3-208ENST00000583649 RSPH6AQ9H0K4 717 aa14.73□□□□□ -0.05
CASC3-208ENST00000583649 GGA3Q9NZ52 723 aa14.73□□□□□ -0.05
CASC3-208ENST00000583649 YDJCA8MPS7 323 aa14.72□□□□□ -0.05
CASC3-208ENST00000583649 C6orf229H3BNL8 230 aa14.72□□□□□ -0.05
CASC3-208ENST00000583649 GPR25O00155 361 aa14.72□□□□□ -0.05
CASC3-208ENST00000583649 FKTNO75072 461 aa14.72□□□□□ -0.05
CASC3-208ENST00000583649 TBC1D8O95759 1140 aa14.72□□□□□ -0.05
CASC3-208ENST00000583649 NF2P35240 595 aa14.72□□□□□ -0.05
CASC3-208ENST00000583649 NECTIN2Q92692 538 aa14.72□□□□□ -0.05
CASC3-208ENST00000583649 NSFL1CQ9UNZ2 370 aaKnown RBP14.72□□□□□ -0.05
CASC3-208ENST00000583649 SHTN1A0MZ66 631 aa14.71□□□□□ -0.05
CASC3-208ENST00000583649 U2AF1L5P0DN76 240 aaPredicted RBP14.71□□□□□ -0.05
CASC3-208ENST00000583649 U2AF1Q01081 240 aaKnown RBP eCLIP14.71□□□□□ -0.05
CASC3-208ENST00000583649 DLK2Q6UY11 383 aa14.71□□□□□ -0.05
CASC3-208ENST00000583649 C3orf67Q6ZVT6 689 aa14.71□□□□□ -0.05
CASC3-208ENST00000583649 DBNDD1Q9H9R9 158 aa14.71□□□□□ -0.05
CASC3-208ENST00000583649 CLSPNQ9HAW4 1339 aa14.7□□□□□ -0.06
CASC3-208ENST00000583649 ALDH1A1P00352 501 aa14.7□□□□□ -0.06
CASC3-208ENST00000583649 TCIRG1Q13488 830 aa14.7□□□□□ -0.06
CASC3-208ENST00000583649 TTLL12Q14166 644 aaPredicted RBP14.7□□□□□ -0.06
CASC3-208ENST00000583649 ZC3H12CQ9C0D7 883 aaKnown RBP14.7□□□□□ -0.06
CASC3-208ENST00000583649 NUP98P52948 1817 aa14.7□□□□□ -0.06
CASC3-208ENST00000583649 RIMBP2O15034 1052 aa14.69□□□□□ -0.06
CASC3-208ENST00000583649 ECE2O60344 883 aa14.69□□□□□ -0.06
CASC3-208ENST00000583649 TM4SF4P48230 202 aa14.69□□□□□ -0.06
CASC3-208ENST00000583649 DCTN1Q14203 1278 aa14.69□□□□□ -0.06
CASC3-208ENST00000583649 TRMT112Q9UI30 125 aaKnown RBP14.69□□□□□ -0.06
CASC3-208ENST00000583649 COL3A1P02461 1466 aaPredicted RBP14.69□□□□□ -0.06
CASC3-208ENST00000583649 SH3TC1Q8TE82 1336 aa14.68□□□□□ -0.06
CASC3-208ENST00000583649 LAMB4A4D0S4 1761 aa14.68□□□□□ -0.06
CASC3-208ENST00000583649 MIS18AQ9NYP9 233 aa14.68□□□□□ -0.06
CASC3-208ENST00000583649 PITPNM2Q9BZ72 1349 aa14.67□□□□□ -0.06
CASC3-208ENST00000583649 EGFRP00533 1210 aa14.67□□□□□ -0.06
CASC3-208ENST00000583649 HCLS1P14317 486 aaPredicted RBP14.67□□□□□ -0.06
CASC3-208ENST00000583649 FXR1P51114 621 aaKnown RBP eCLIP14.67□□□□□ -0.06
CASC3-208ENST00000583649 CNGB1Q14028 1251 aaPredicted RBP14.67□□□□□ -0.06
CASC3-208ENST00000583649 SCARF1Q14162 830 aa14.67□□□□□ -0.06
CASC3-208ENST00000583649 ANGEL2Q5VTE6 544 aaKnown RBP14.67□□□□□ -0.06
CASC3-208ENST00000583649 SLC51AQ86UW1 340 aa14.67□□□□□ -0.06
CASC3-208ENST00000583649 PER1O15534 1290 aaPredicted RBP14.66□□□□□ -0.06
CASC3-208ENST00000583649 VIL1P09327 827 aaKnown RBP14.66□□□□□ -0.06
CASC3-208ENST00000583649 INHBEP58166 350 aa14.66□□□□□ -0.06
CASC3-208ENST00000583649 EIF4A1P60842 406 aaKnown RBP14.66□□□□□ -0.06
CASC3-208ENST00000583649 AGBL3Q8NEM8 1001 aa14.66□□□□□ -0.06
CASC3-208ENST00000583649 CFHR5Q9BXR6 569 aa14.66□□□□□ -0.06
CASC3-208ENST00000583649 PAPPA2Q9BXP8 1791 aa14.65□□□□□ -0.06
CASC3-208ENST00000583649 DOK7Q18PE1 504 aa14.65□□□□□ -0.06
CASC3-208ENST00000583649 TMEM106CQ9BVX2 250 aa14.65□□□□□ -0.06
CASC3-208ENST00000583649 TRIM17Q9Y577 477 aa14.65□□□□□ -0.06
CASC3-208ENST00000583649 UBE2Q2LH0YL09 131 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms