RNA–Protein interactions for RNA: ENST00000582490.5

NDEL1-213, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-213ENST00000582490 GLIS2Q9BZE0 524 aaPredicted RBP8.33□□□□□ -1.08
NDEL1-213ENST00000582490 LGR6Q9HBX8 967 aa8.33□□□□□ -1.08
NDEL1-213ENST00000582490 GJA3Q9Y6H8 435 aa8.33□□□□□ -1.08
NDEL1-213ENST00000582490 COL15A1P39059 1388 aa8.33□□□□□ -1.08
NDEL1-213ENST00000582490 SHTN1A0MZ66 631 aa8.32□□□□□ -1.08
NDEL1-213ENST00000582490 FZD9O00144 591 aa8.32□□□□□ -1.08
NDEL1-213ENST00000582490 DLL1O00548 723 aa8.32□□□□□ -1.08
NDEL1-213ENST00000582490 PPP1R37O75864 691 aa8.32□□□□□ -1.08
NDEL1-213ENST00000582490 CELF2O95319 508 aaKnown RBP8.32□□□□□ -1.08
NDEL1-213ENST00000582490 SRGNP10124 158 aa8.32□□□□□ -1.08
NDEL1-213ENST00000582490 ECE1P42892 770 aa8.32□□□□□ -1.08
NDEL1-213ENST00000582490 SCNN1DP51172 638 aa8.32□□□□□ -1.08
NDEL1-213ENST00000582490 ZNF530Q6P9A1 599 aaPredicted RBP8.32□□□□□ -1.08
NDEL1-213ENST00000582490 RANBP2P49792 3224 aaKnown RBP8.32□□□□□ -1.08
NDEL1-213ENST00000582490 ANKRD26Q9UPS8 1709 aa8.32□□□□□ -1.08
NDEL1-213ENST00000582490 BRIP1Q9BX63 1249 aa8.31□□□□□ -1.08
NDEL1-213ENST00000582490 CARD11Q9BXL7 1154 aa8.31□□□□□ -1.08
NDEL1-213ENST00000582490 POLKQ9UBT6 870 aa8.31□□□□□ -1.08
NDEL1-213ENST00000582490 TBC1D2BQ9UPU7 963 aa8.31□□□□□ -1.08
NDEL1-213ENST00000582490 HPS5Q9UPZ3 1129 aa8.31□□□□□ -1.08
NDEL1-213ENST00000582490 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
NDEL1-213ENST00000582490 FAM155AB1AL88 458 aaPredicted RBP8.3□□□□□ -1.08
NDEL1-213ENST00000582490 TRPA1O75762 1119 aa8.3□□□□□ -1.08
NDEL1-213ENST00000582490 HIRAP54198 1017 aaPredicted RBP8.3□□□□□ -1.08
NDEL1-213ENST00000582490 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
NDEL1-213ENST00000582490 ZNF408Q9H9D4 720 aa8.3□□□□□ -1.08
NDEL1-213ENST00000582490 WASHC2AQ641Q2 1341 aa8.29□□□□□ -1.08
NDEL1-213ENST00000582490 ST20-MTHFSA0A0A6YYL1 179 aa8.29□□□□□ -1.08
NDEL1-213ENST00000582490 TNNT2P45379 298 aaPredicted RBP8.29□□□□□ -1.08
NDEL1-213ENST00000582490 PIP4K2AP48426 406 aaPredicted RBP8.29□□□□□ -1.08
NDEL1-213ENST00000582490 MTHFSP49914 203 aa8.29□□□□□ -1.08
NDEL1-213ENST00000582490 LSM11P83369 360 aaKnown RBP eCLIP8.29□□□□□ -1.08
NDEL1-213ENST00000582490 FKBP4Q02790 459 aaKnown RBP eCLIP8.29□□□□□ -1.08
NDEL1-213ENST00000582490 PNMA8AQ86V59 439 aaPredicted RBP8.29□□□□□ -1.08
NDEL1-213ENST00000582490 RNF186Q9NXI6 227 aa8.29□□□□□ -1.08
NDEL1-213ENST00000582490 LHX6Q9UPM6 363 aa8.29□□□□□ -1.08
NDEL1-213ENST00000582490 SNED1Q8TER0 1413 aa8.29□□□□□ -1.08
NDEL1-213ENST00000582490 PDE6BP35913 854 aa8.28□□□□□ -1.08
NDEL1-213ENST00000582490 IARSP41252 1262 aaKnown RBP8.28□□□□□ -1.08
NDEL1-213ENST00000582490 EIF5P55010 431 aaKnown RBP8.28□□□□□ -1.08
NDEL1-213ENST00000582490 STYK1Q6J9G0 422 aa8.28□□□□□ -1.08
NDEL1-213ENST00000582490 BCORQ6W2J9 1755 aa8.27□□□□□ -1.08
NDEL1-213ENST00000582490 PBX2P40425 430 aa8.27□□□□□ -1.09
NDEL1-213ENST00000582490 KIF23Q02241 960 aaPredicted RBP8.27□□□□□ -1.09
NDEL1-213ENST00000582490 CCDC93Q567U6 631 aa8.27□□□□□ -1.09
NDEL1-213ENST00000582490 HS6ST3Q8IZP7 471 aa8.27□□□□□ -1.09
NDEL1-213ENST00000582490 GPC2Q8N158 579 aa8.27□□□□□ -1.09
NDEL1-213ENST00000582490 TRPM4Q8TD43 1214 aa8.27□□□□□ -1.09
NDEL1-213ENST00000582490 CNKSR1Q969H4 720 aa8.27□□□□□ -1.09
NDEL1-213ENST00000582490 MASTLQ96GX5 879 aa8.27□□□□□ -1.09
NDEL1-213ENST00000582490 SCN7AQ01118 1682 aa8.27□□□□□ -1.09
NDEL1-213ENST00000582490 PAPPA2Q9BXP8 1791 aa8.26□□□□□ -1.09
NDEL1-213ENST00000582490 CA12O43570 354 aa8.26□□□□□ -1.09
NDEL1-213ENST00000582490 CAMTA2O94983 1202 aa8.26□□□□□ -1.09
NDEL1-213ENST00000582490 A1BGP04217 495 aa8.26□□□□□ -1.09
NDEL1-213ENST00000582490 PDE4CQ08493 712 aa8.26□□□□□ -1.09
NDEL1-213ENST00000582490 TAF7LQ5H9L4 462 aa8.26□□□□□ -1.09
NDEL1-213ENST00000582490 PUS7Q96PZ0 661 aaKnown RBP8.26□□□□□ -1.09
NDEL1-213ENST00000582490 CSRNP1Q96S65 589 aa8.26□□□□□ -1.09
NDEL1-213ENST00000582490 R3HDMLQ9H3Y0 253 aa8.26□□□□□ -1.09
NDEL1-213ENST00000582490 ZNF330Q9Y3S2 320 aaPredicted RBP8.26□□□□□ -1.09
NDEL1-213ENST00000582490 KIF24Q5T7B8 1368 aa8.25□□□□□ -1.09
NDEL1-213ENST00000582490 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
NDEL1-213ENST00000582490 TCERG1O14776 1098 aaKnown RBP8.25□□□□□ -1.09
NDEL1-213ENST00000582490 ZEB1P37275 1124 aaPredicted RBP8.25□□□□□ -1.09
NDEL1-213ENST00000582490 PLEKHO1Q53GL0 409 aaPredicted RBP8.25□□□□□ -1.09
NDEL1-213ENST00000582490 CTU1Q7Z7A3 348 aaKnown RBP8.25□□□□□ -1.09
NDEL1-213ENST00000582490 USP48Q86UV5 1035 aa8.25□□□□□ -1.09
NDEL1-213ENST00000582490 TAF1P21675 1872 aa8.25□□□□□ -1.09
NDEL1-213ENST00000582490 UBR2Q8IWV8 1755 aa8.25□□□□□ -1.09
NDEL1-213ENST00000582490 EGFRP00533 1210 aa8.24□□□□□ -1.09
NDEL1-213ENST00000582490 HUNKP57058 714 aa8.24□□□□□ -1.09
NDEL1-213ENST00000582490 CNBD1Q8NA66 436 aa8.24□□□□□ -1.09
NDEL1-213ENST00000582490 UNC80Q8N2C7 3258 aa8.24□□□□□ -1.09
NDEL1-213ENST00000582490 LAMA3Q16787 3333 aa8.23□□□□□ -1.09
NDEL1-213ENST00000582490 KCNQ3O43525 872 aa8.23□□□□□ -1.09
NDEL1-213ENST00000582490 TBC1D8O95759 1140 aa8.23□□□□□ -1.09
NDEL1-213ENST00000582490 HSP90AB1P08238 724 aaKnown RBP8.23□□□□□ -1.09
NDEL1-213ENST00000582490 POTEEQ6S8J3 1075 aa8.23□□□□□ -1.09
NDEL1-213ENST00000582490 USP50Q70EL3 339 aaPredicted RBP8.23□□□□□ -1.09
NDEL1-213ENST00000582490 NBPF15Q8N660 670 aa8.23□□□□□ -1.09
NDEL1-213ENST00000582490 SLC52A2Q9HAB3 445 aa8.23□□□□□ -1.09
NDEL1-213ENST00000582490 PRAMEF22A3QJZ6 481 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 KLRG2A4D1S0 409 aaPredicted RBP8.22□□□□□ -1.09
NDEL1-213ENST00000582490 RNMTO43148 476 aaKnown RBP8.22□□□□□ -1.09
NDEL1-213ENST00000582490 NPR1P16066 1061 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 LMOD1P29536 600 aaPredicted RBP8.22□□□□□ -1.09
NDEL1-213ENST00000582490 GMPSP49915 693 aaPredicted RBP8.22□□□□□ -1.09
NDEL1-213ENST00000582490 FOXK1P85037 733 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 CXCL9Q07325 125 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 NOGQ13253 232 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 PLPP6Q8IY26 295 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 SLC17A8Q8NDX2 589 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 HHIPL1Q96JK4 782 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 SETDB2Q96T68 719 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 GPRC5DQ9NZD1 345 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 PGAP2Q9UHJ9 254 aa8.22□□□□□ -1.09
NDEL1-213ENST00000582490 ASTN2O75129 1339 aaPredicted RBP8.22□□□□□ -1.09
NDEL1-213ENST00000582490 ADM5C9JUS6 153 aa8.21□□□□□ -1.1
NDEL1-213ENST00000582490 EN2P19622 333 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms