RNA–Protein interactions for RNA: ENST00000581949.1

TMEM220-206, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM220, Length 376 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-206ENST00000581949 CHMP3Q9Y3E7 222 aa13.48□□□□□ -0.25
TMEM220-206ENST00000581949 BBOX1O75936 387 aa13.47□□□□□ -0.25
TMEM220-206ENST00000581949 GNAI3P08754 354 aa13.47□□□□□ -0.25
TMEM220-206ENST00000581949 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
TMEM220-206ENST00000581949 HOXA10P31260 410 aaPredicted RBP13.47□□□□□ -0.25
TMEM220-206ENST00000581949 CTSWP56202 376 aa13.47□□□□□ -0.25
TMEM220-206ENST00000581949 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
TMEM220-206ENST00000581949 PRPF40BQ6NWY9 871 aaKnown RBP13.47□□□□□ -0.25
TMEM220-206ENST00000581949 CCDC85AQ96PX6 553 aaPredicted RBP13.47□□□□□ -0.25
TMEM220-206ENST00000581949 C21orf2O43822 256 aa13.46□□□□□ -0.25
TMEM220-206ENST00000581949 C3orf67Q6ZVT6 689 aa13.46□□□□□ -0.25
TMEM220-206ENST00000581949 ITPRIPQ8IWB1 547 aa13.46□□□□□ -0.25
TMEM220-206ENST00000581949 CDC5LQ99459 802 aaKnown RBP13.46□□□□□ -0.25
TMEM220-206ENST00000581949 PLA2G12BQ9BX93 195 aa13.46□□□□□ -0.25
TMEM220-206ENST00000581949 MYH3P11055 1940 aa13.46□□□□□ -0.25
TMEM220-206ENST00000581949 CACNA1SQ13698 1873 aa13.46□□□□□ -0.26
TMEM220-206ENST00000581949 ABCC4O15439 1325 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 PPEF1O14829 653 aaPredicted RBP13.45□□□□□ -0.26
TMEM220-206ENST00000581949 NBPF7P0C2Y1 421 aaPredicted RBP13.45□□□□□ -0.26
TMEM220-206ENST00000581949 YBX3P16989 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
TMEM220-206ENST00000581949 GRAPQ13588 217 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 CCDC57Q2TAC2 916 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 TAF7LQ5H9L4 462 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 CC2D2BQ6DHV5 1058 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 TMC4Q7Z404 712 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 ANKRD18AQ8IVF6 992 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 TMEM57Q8N5G2 664 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 TTLL11Q8NHH1 800 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 GRAPLQ8TC17 118 aaPredicted RBP13.45□□□□□ -0.26
TMEM220-206ENST00000581949 USP44Q9H0E7 712 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 CHMP4BQ9H444 224 aaKnown RBP13.45□□□□□ -0.26
TMEM220-206ENST00000581949 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
TMEM220-206ENST00000581949 DDX60Q8IY21 1712 aaKnown RBP13.44□□□□□ -0.26
TMEM220-206ENST00000581949 ANKRD18BA2A2Z9 1011 aa13.44□□□□□ -0.26
TMEM220-206ENST00000581949 PLIN1O60240 522 aa13.44□□□□□ -0.26
TMEM220-206ENST00000581949 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
TMEM220-206ENST00000581949 CASP7P55210 303 aa13.44□□□□□ -0.26
TMEM220-206ENST00000581949 RPS8P62241 208 aaKnown RBP13.44□□□□□ -0.26
TMEM220-206ENST00000581949 IFIT5Q13325 482 aaKnown RBP13.44□□□□□ -0.26
TMEM220-206ENST00000581949 GRIPAP1Q4V328 841 aa13.44□□□□□ -0.26
TMEM220-206ENST00000581949 CCDC93Q567U6 631 aa13.44□□□□□ -0.26
TMEM220-206ENST00000581949 RTKN2Q8IZC4 609 aa13.44□□□□□ -0.26
TMEM220-206ENST00000581949 MPHOSPH8Q99549 860 aa13.44□□□□□ -0.26
TMEM220-206ENST00000581949 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
TMEM220-206ENST00000581949 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
TMEM220-206ENST00000581949 TNRC6CQ9HCJ0 1690 aaKnown RBP13.44□□□□□ -0.26
TMEM220-206ENST00000581949 UTYO14607 1347 aa13.43□□□□□ -0.26
TMEM220-206ENST00000581949 LAMB2P55268 1798 aa13.43□□□□□ -0.26
TMEM220-206ENST00000581949 COL11A2P13942 1736 aaPredicted RBP13.43□□□□□ -0.26
TMEM220-206ENST00000581949 LMBR1LQ6UX01 489 aa13.43□□□□□ -0.26
TMEM220-206ENST00000581949 SUCLG2Q96I99 432 aa13.43□□□□□ -0.26
TMEM220-206ENST00000581949 TNNQ9UQP3 1299 aa13.43□□□□□ -0.26
TMEM220-206ENST00000581949 SLX4Q8IY92 1834 aa13.43□□□□□ -0.26
TMEM220-206ENST00000581949 ARFGEF1Q9Y6D6 1849 aa13.43□□□□□ -0.26
TMEM220-206ENST00000581949 CSF1RP07333 972 aa13.42□□□□□ -0.26
TMEM220-206ENST00000581949 ITGA6P23229 1130 aa13.42□□□□□ -0.26
TMEM220-206ENST00000581949 FOXO4P98177 505 aa13.42□□□□□ -0.26
TMEM220-206ENST00000581949 SP8Q8IXZ3 490 aa13.42□□□□□ -0.26
TMEM220-206ENST00000581949 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
TMEM220-206ENST00000581949 GREM2Q9H772 168 aa13.42□□□□□ -0.26
TMEM220-206ENST00000581949 SEC31BQ9NQW1 1179 aa13.42□□□□□ -0.26
TMEM220-206ENST00000581949 ATP6V0A2Q9Y487 856 aa13.42□□□□□ -0.26
TMEM220-206ENST00000581949 SRCAPQ6ZRS2 3230 aa13.42□□□□□ -0.26
TMEM220-206ENST00000581949 GNAI2P04899 355 aa13.41□□□□□ -0.26
TMEM220-206ENST00000581949 PDE3AQ14432 1141 aa13.41□□□□□ -0.26
TMEM220-206ENST00000581949 CELF1Q92879 486 aaKnown RBP13.41□□□□□ -0.26
TMEM220-206ENST00000581949 MEIS3Q99687 375 aa13.41□□□□□ -0.26
TMEM220-206ENST00000581949 BICC1Q9H694 974 aaKnown RBP13.41□□□□□ -0.26
TMEM220-206ENST00000581949 FAM161AQ3B820 660 aa13.4□□□□□ -0.26
TMEM220-206ENST00000581949 SUPT20HQ8NEM7 779 aa13.4□□□□□ -0.26
TMEM220-206ENST00000581949 TAOK3Q9H2K8 898 aa13.4□□□□□ -0.26
TMEM220-206ENST00000581949 ANKIB1Q9P2G1 1089 aa13.4□□□□□ -0.26
TMEM220-206ENST00000581949 DDX19BQ9UMR2 479 aa13.4□□□□□ -0.26
TMEM220-206ENST00000581949 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
TMEM220-206ENST00000581949 TAF1P21675 1872 aa13.4□□□□□ -0.26
TMEM220-206ENST00000581949 RLBP1P12271 317 aa13.39□□□□□ -0.27
TMEM220-206ENST00000581949 MVPQ14764 893 aaKnown RBP13.39□□□□□ -0.27
TMEM220-206ENST00000581949 EPHA10Q5JZY3 1008 aa13.39□□□□□ -0.27
TMEM220-206ENST00000581949 DPP8Q6V1X1 898 aaPredicted RBP13.39□□□□□ -0.27
TMEM220-206ENST00000581949 MPNDQ8N594 471 aa13.39□□□□□ -0.27
TMEM220-206ENST00000581949 CNNM1Q9NRU3 951 aa13.39□□□□□ -0.27
TMEM220-206ENST00000581949 NSFL1CQ9UNZ2 370 aaKnown RBP13.39□□□□□ -0.27
TMEM220-206ENST00000581949 COG6Q9Y2V7 657 aa13.39□□□□□ -0.27
TMEM220-206ENST00000581949 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
TMEM220-206ENST00000581949 RRP1P56182 461 aaKnown RBP13.38□□□□□ -0.27
TMEM220-206ENST00000581949 FKBP4Q02790 459 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMEM220-206ENST00000581949 LDHAL6AQ6ZMR3 332 aa13.38□□□□□ -0.27
TMEM220-206ENST00000581949 C7orf43Q8WVR3 580 aa13.38□□□□□ -0.27
TMEM220-206ENST00000581949 BSDC1Q9NW68 430 aaPredicted RBP13.38□□□□□ -0.27
TMEM220-206ENST00000581949 CHD4Q14839 1912 aa13.38□□□□□ -0.27
TMEM220-206ENST00000581949 G3V3G9 751 aa13.37□□□□□ -0.27
TMEM220-206ENST00000581949 C6orf229H3BNL8 230 aa13.37□□□□□ -0.27
TMEM220-206ENST00000581949 ZBTB7BO15156 539 aaPredicted RBP13.37□□□□□ -0.27
TMEM220-206ENST00000581949 LMNB1P20700 586 aa13.37□□□□□ -0.27
TMEM220-206ENST00000581949 RABL6Q3YEC7 729 aaPredicted RBP13.37□□□□□ -0.27
TMEM220-206ENST00000581949 DCAF8Q5TAQ9 597 aa13.37□□□□□ -0.27
TMEM220-206ENST00000581949 OLFM4Q6UX06 510 aa13.37□□□□□ -0.27
TMEM220-206ENST00000581949 KAZALD1Q96I82 304 aa13.37□□□□□ -0.27
TMEM220-206ENST00000581949 ANKRD2Q9GZV1 360 aa13.37□□□□□ -0.27
TMEM220-206ENST00000581949 KCNJ4P48050 445 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms