RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 RRP7AQ9Y3A4 280 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-218ENST00000581655 ABCC4O15439 1325 aa16.78■□□□□ 0.28
CSNK1D-218ENST00000581655 H7C1D1 291 aa16.78■□□□□ 0.28
CSNK1D-218ENST00000581655 CTU1Q7Z7A3 348 aaKnown RBP16.78■□□□□ 0.28
CSNK1D-218ENST00000581655 MICALL2Q8IY33 904 aa16.78■□□□□ 0.28
CSNK1D-218ENST00000581655 ZNF34Q8IZ26 560 aa16.78■□□□□ 0.28
CSNK1D-218ENST00000581655 C2orf69Q8N8R5 385 aa16.78■□□□□ 0.28
CSNK1D-218ENST00000581655 CCDC102AQ96A19 550 aa16.78■□□□□ 0.28
CSNK1D-218ENST00000581655 MIS18AQ9NYP9 233 aa16.78■□□□□ 0.28
CSNK1D-218ENST00000581655 MYL6BP14649 208 aa16.77■□□□□ 0.28
CSNK1D-218ENST00000581655 ZNF157P51786 506 aaPredicted RBP16.77■□□□□ 0.28
CSNK1D-218ENST00000581655 KRT26Q7Z3Y9 468 aa16.77■□□□□ 0.28
CSNK1D-218ENST00000581655 MPNDQ8N594 471 aa16.77■□□□□ 0.28
CSNK1D-218ENST00000581655 YDJCA8MPS7 323 aa16.76■□□□□ 0.27
CSNK1D-218ENST00000581655 TAF7Q15545 349 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-218ENST00000581655 SAMD7Q7Z3H4 446 aa16.76■□□□□ 0.27
CSNK1D-218ENST00000581655 PPP1R42Q7Z4L9 355 aa16.76■□□□□ 0.27
CSNK1D-218ENST00000581655 ZBTB12Q9Y330 459 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-218ENST00000581655 GIGYF2Q6Y7W6 1299 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-218ENST00000581655 SP8Q8IXZ3 490 aa16.75■□□□□ 0.27
CSNK1D-218ENST00000581655 CSRNP1Q96S65 589 aa16.75■□□□□ 0.27
CSNK1D-218ENST00000581655 HPS5Q9UPZ3 1129 aa16.75■□□□□ 0.27
CSNK1D-218ENST00000581655 ADM5C9JUS6 153 aa16.74■□□□□ 0.27
CSNK1D-218ENST00000581655 TBC1D10BQ4KMP7 808 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-218ENST00000581655 PARP10Q53GL7 1025 aa16.74■□□□□ 0.27
CSNK1D-218ENST00000581655 CLSPNQ9HAW4 1339 aa16.73■□□□□ 0.27
CSNK1D-218ENST00000581655 HTATSF1O43719 755 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-218ENST00000581655 BBOX1O75936 387 aa16.73■□□□□ 0.27
CSNK1D-218ENST00000581655 EGFRP00533 1210 aa16.73■□□□□ 0.27
CSNK1D-218ENST00000581655 SLC10A3P09131 477 aa16.73■□□□□ 0.27
CSNK1D-218ENST00000581655 DPF2Q92785 391 aa16.73■□□□□ 0.27
CSNK1D-218ENST00000581655 LAMB2P55268 1798 aa16.73■□□□□ 0.27
CSNK1D-218ENST00000581655 PSMD14O00487 310 aa16.72■□□□□ 0.27
CSNK1D-218ENST00000581655 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-218ENST00000581655 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.27
CSNK1D-218ENST00000581655 SLC10A5Q5PT55 438 aa16.72■□□□□ 0.27
CSNK1D-218ENST00000581655 RBM26Q5T8P6 1007 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-218ENST00000581655 DCPSQ96C86 337 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-218ENST00000581655 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
CSNK1D-218ENST00000581655 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-218ENST00000581655 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
CSNK1D-218ENST00000581655 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
CSNK1D-218ENST00000581655 TAF1P21675 1872 aa16.71■□□□□ 0.27
CSNK1D-218ENST00000581655 DUOX1Q9NRD9 1551 aa16.71■□□□□ 0.27
CSNK1D-218ENST00000581655 ANKRD36CQ5JPF3 1778 aa16.71■□□□□ 0.27
CSNK1D-218ENST00000581655 EIF4A1P60842 406 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-218ENST00000581655 HCLS1P14317 486 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-218ENST00000581655 GRAPQ13588 217 aa16.69■□□□□ 0.26
CSNK1D-218ENST00000581655 PKN2Q16513 984 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-218ENST00000581655 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-218ENST00000581655 GRAPLQ8TC17 118 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-218ENST00000581655 PNISRQ8TF01 805 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-218ENST00000581655 GCC1Q96CN9 775 aa16.69■□□□□ 0.26
CSNK1D-218ENST00000581655 DBNDD1Q9H9R9 158 aa16.69■□□□□ 0.26
CSNK1D-218ENST00000581655 HDAC9Q9UKV0 1011 aa16.69■□□□□ 0.26
CSNK1D-218ENST00000581655 RASAL3Q86YV0 1011 aa16.68■□□□□ 0.26
CSNK1D-218ENST00000581655 SULF1Q8IWU6 871 aa16.68■□□□□ 0.26
CSNK1D-218ENST00000581655 THUMPD2Q9BTF0 503 aaKnown RBP16.68■□□□□ 0.26
CSNK1D-218ENST00000581655 GGA3Q9NZ52 723 aa16.68■□□□□ 0.26
CSNK1D-218ENST00000581655 RPS12P25398 132 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-218ENST00000581655 WASHC4Q2M389 1173 aa16.67■□□□□ 0.26
CSNK1D-218ENST00000581655 KIF4BQ2VIQ3 1234 aa16.67■□□□□ 0.26
CSNK1D-218ENST00000581655 REM2Q8IYK8 340 aaPredicted RBP16.67■□□□□ 0.26
CSNK1D-218ENST00000581655 PCGF6Q9BYE7 350 aa16.67■□□□□ 0.26
CSNK1D-218ENST00000581655 LRRC37AA6NMS7 1700 aa16.67■□□□□ 0.26
CSNK1D-218ENST00000581655 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
CSNK1D-218ENST00000581655 RIMBP2O15034 1052 aa16.66■□□□□ 0.26
CSNK1D-218ENST00000581655 TRIM26Q12899 539 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-218ENST00000581655 ZNF296Q8WUU4 475 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-218ENST00000581655 CDCA5Q96FF9 252 aa16.66■□□□□ 0.26
CSNK1D-218ENST00000581655 KCNQ5Q9NR82 932 aa16.66■□□□□ 0.26
CSNK1D-218ENST00000581655 ASTN2O75129 1339 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-218ENST00000581655 ERBB4Q15303 1308 aa16.66■□□□□ 0.26
CSNK1D-218ENST00000581655 MKI67P46013 3256 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-218ENST00000581655 TBC1D8O95759 1140 aa16.65■□□□□ 0.26
CSNK1D-218ENST00000581655 HABP4Q5JVS0 413 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-218ENST00000581655 LRP10Q7Z4F1 713 aa16.65■□□□□ 0.26
CSNK1D-218ENST00000581655 RTL9Q8NET4 1388 aa16.64■□□□□ 0.26
CSNK1D-218ENST00000581655 ECE2O60344 883 aa16.64■□□□□ 0.25
CSNK1D-218ENST00000581655 TMC4Q7Z404 712 aa16.64■□□□□ 0.25
CSNK1D-218ENST00000581655 NLRP10Q86W26 655 aa16.64■□□□□ 0.25
CSNK1D-218ENST00000581655 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-218ENST00000581655 C6orf229H3BNL8 230 aa16.63■□□□□ 0.25
CSNK1D-218ENST00000581655 ANXA1P04083 346 aa16.63■□□□□ 0.25
CSNK1D-218ENST00000581655 DOK7Q18PE1 504 aa16.63■□□□□ 0.25
CSNK1D-218ENST00000581655 FBXO46Q6PJ61 603 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-218ENST00000581655 TRMT112Q9UI30 125 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-218ENST00000581655 SCN9AQ15858 1988 aa16.63■□□□□ 0.25
CSNK1D-218ENST00000581655 DDX60Q8IY21 1712 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-218ENST00000581655 PAPPA2Q9BXP8 1791 aa16.62■□□□□ 0.25
CSNK1D-218ENST00000581655 PDIA6Q15084 440 aa16.62■□□□□ 0.25
CSNK1D-218ENST00000581655 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
CSNK1D-218ENST00000581655 POLLQ9UGP5 575 aa16.62■□□□□ 0.25
CSNK1D-218ENST00000581655 SH3TC1Q8TE82 1336 aa16.62■□□□□ 0.25
CSNK1D-218ENST00000581655 EIF2S2P20042 333 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-218ENST00000581655 FKBP1BP68106 108 aa16.61■□□□□ 0.25
CSNK1D-218ENST00000581655 HSP90AB3PQ58FF7 597 aa16.61■□□□□ 0.25
CSNK1D-218ENST00000581655 ANGEL2Q5VTE6 544 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-218ENST00000581655 ZNF428Q96B54 188 aa16.61■□□□□ 0.25
CSNK1D-218ENST00000581655 GPR25O00155 361 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms