RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, human

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC8-208	ENST00000581057	IGFLR1	Q9H665	355 aa		11.56	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	C11orf16	Q9NQ32	467 aa		11.56	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	IGHA2	P01877	340 aa		11.55	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	VSIG8	P0DPA2	414 aa		11.55	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	NFX1	Q12986	1120 aa	Known RBP	11.55	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	ORC1	Q13415	861 aa		11.55	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	RNFT1	Q5M7Z0	435 aa		11.55	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.55	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	XKR5	Q6UX68	686 aa		11.55	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	NPAS4	Q8IUM7	802 aa		11.55	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	ABI2	Q9NYB9	513 aa	Predicted RBP	11.55	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	ZFAT	Q9P243	1243 aa		11.55	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	TNFRSF21	O75509	655 aa		11.54	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	PCBP4	P57723	403 aa	Known RBP	11.54	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	TBC1D8B	Q0IIM8	1120 aa		11.54	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	SYT9	Q86SS6	491 aa		11.54	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	MBIP	Q9NS73	344 aa		11.54	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.54	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	MMP20	O60882	483 aa		11.53	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	PHACTR2	O75167	634 aa		11.53	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	DSC3	Q14574	896 aa		11.53	□□□□□ -0.56
TRAPPC8-208	ENST00000581057	NEFL	P07196	543 aa		11.52	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	P4HB	P07237	508 aa	Known RBP	11.52	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	SNX29	Q8TEQ0	813 aa		11.52	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	ALKBH8	Q96BT7	664 aa	Known RBP	11.52	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	ZNF775	Q96BV0	537 aa	Predicted RBP	11.52	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	CNTNAP3B	Q96NU0	1288 aa		11.52	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	CNTNAP3	Q9BZ76	1288 aa		11.52	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	CNTN3	Q9P232	1028 aa		11.52	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	C1orf127	Q8N9H9	656 aa		11.51	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	BCL2L13	Q9BXK5	485 aa		11.51	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	IGF1R	P08069	1367 aa		11.51	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	CYP2E1	P05181	493 aa	Predicted RBP	11.5	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	PSAP	P07602	524 aa		11.5	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	FMR1	Q06787	632 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	EAPP	Q56P03	285 aa	Predicted RBP	11.5	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.5	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	KANSL3	Q9P2N6	904 aa		11.5	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	PNMA6F	A0A0J9YX94	578 aa		11.49	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	EIF1AY	O14602	144 aa	Known RBP	11.49	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	WFS1	O76024	890 aa		11.49	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	CES1	P23141	567 aa		11.49	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	MAP2K3	P46734	347 aa		11.49	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	DHX32	Q7L7V1	743 aa	Known RBP	11.49	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	CSRNP1	Q96S65	589 aa		11.49	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	UBE2O	Q9C0C9	1292 aa	Known RBP	11.49	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	EFCC1	Q9HA90	598 aa		11.49	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	PHF20L1	A8MW92	1017 aa		11.48	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	EREG	O14944	169 aa		11.48	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	CPNE3	O75131	537 aa	Known RBP	11.48	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	POLR3D	P05423	398 aa	Predicted RBP	11.48	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	KRT76	Q01546	638 aa		11.48	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	MLLT1	Q03111	559 aa	Predicted RBP	11.48	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	USPL1	Q5W0Q7	1092 aa		11.48	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	GIPC2	Q8TF65	315 aa		11.48	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	ZFYVE28	Q9HCC9	887 aa		11.48	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	TLR7	Q9NYK1	1049 aa	Known RBP	11.48	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	NEURL1B	A8MQ27	555 aa		11.47	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	NSUN5	Q96P11	429 aa	Known RBP	11.47	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	SETDB2	Q96T68	719 aa		11.47	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	CHRD	Q9H2X0	955 aa		11.47	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	WWC3	Q9ULE0	1092 aa		11.47	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	MAP3K6	O95382	1288 aa		11.46	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	LDHB	P07195	334 aa	Known RBP	11.46	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	GMPR	P36959	345 aa		11.46	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	ATP2B2	Q01814	1243 aa		11.46	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	TAGLN	Q01995	201 aa	Known RBP	11.46	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	PLAUR	Q03405	335 aa		11.46	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	OR13H1	Q8NG92	308 aa		11.46	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	GGA1	Q9UJY5	639 aa		11.46	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	AMOTL2	Q9Y2J4	779 aa		11.46	□□□□□ -0.57
TRAPPC8-208	ENST00000581057	ARAF	P10398	606 aa		11.45	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	ADH6	P28332	368 aa		11.45	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	SRSF11	Q05519	484 aa	Known RBP	11.45	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	LCE2C	Q5TA81	110 aa		11.45	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	HFE2	Q6ZVN8	426 aa		11.45	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	KLF15	Q9UIH9	416 aa		11.45	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.45	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	ADAMTS2	O95450	1211 aa		11.44	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	COL19A1	Q14993	1142 aa		11.44	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	ENOX2	Q16206	610 aa	Known RBP	11.44	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	PMEPA1	Q969W9	287 aa		11.44	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.44	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	DNAJC25	Q9H1X3	360 aa		11.44	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	AVEN	Q9NQS1	362 aa	Predicted RBP	11.44	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	DNAJB12	Q9NXW2	375 aa	Known RBP	11.44	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	SIN3B	O75182	1162 aa		11.43	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.43	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	FBXO33	Q7Z6M2	555 aa		11.43	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	NCAPG2	Q86XI2	1143 aa		11.43	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	ZBTB42	B2RXF5	422 aa		11.42	□□□□□ -0.58
TRAPPC8-208	ENST00000581057		J3QW42	95 aa		11.42	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	HYAL2	Q12891	473 aa		11.42	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	ZNF326	Q5BKZ1	582 aa	Known RBP	11.42	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	SOX18	P35713	384 aa		11.41	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	NRL	P54845	237 aa		11.41	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	TREML4	Q6UXN2	200 aa		11.41	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	FCHSD1	Q86WN1	690 aa		11.41	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	CCDC74A	Q96AQ1	378 aa		11.41	□□□□□ -0.58
TRAPPC8-208	ENST00000581057	ZNF428	Q96B54	188 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms