RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 TRPA1O75762 1119 aa12.41□□□□□ -0.42
SMARCD2-208ENST00000580054 RGMBQ6NW40 437 aa12.41□□□□□ -0.42
SMARCD2-208ENST00000580054 MICALL2Q8IY33 904 aa12.41□□□□□ -0.42
SMARCD2-208ENST00000580054 RTFDC1Q9BY42 306 aaPredicted RBP12.41□□□□□ -0.42
SMARCD2-208ENST00000580054 MIS18AQ9NYP9 233 aa12.41□□□□□ -0.42
SMARCD2-208ENST00000580054 ADM5C9JUS6 153 aa12.4□□□□□ -0.42
SMARCD2-208ENST00000580054 EGFRP00533 1210 aa12.4□□□□□ -0.42
SMARCD2-208ENST00000580054 KIAA2012Q0VF49 1180 aa12.4□□□□□ -0.42
SMARCD2-208ENST00000580054 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
SMARCD2-208ENST00000580054 SAMD7Q7Z3H4 446 aa12.4□□□□□ -0.42
SMARCD2-208ENST00000580054 GBA2Q9HCG7 927 aaPredicted RBP12.4□□□□□ -0.42
SMARCD2-208ENST00000580054 CNOT7Q9UIV1 285 aaKnown RBP12.4□□□□□ -0.42
SMARCD2-208ENST00000580054 ZBTB12Q9Y330 459 aaPredicted RBP12.4□□□□□ -0.42
SMARCD2-208ENST00000580054 MYL6BP14649 208 aa12.39□□□□□ -0.43
SMARCD2-208ENST00000580054 DPP8Q6V1X1 898 aaPredicted RBP12.39□□□□□ -0.43
SMARCD2-208ENST00000580054 CTU1Q7Z7A3 348 aaKnown RBP12.39□□□□□ -0.43
SMARCD2-208ENST00000580054 ZNF34Q8IZ26 560 aa12.39□□□□□ -0.43
SMARCD2-208ENST00000580054 RTF1Q92541 710 aaKnown RBP12.39□□□□□ -0.43
SMARCD2-208ENST00000580054 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
SMARCD2-208ENST00000580054 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
SMARCD2-208ENST00000580054 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
SMARCD2-208ENST00000580054 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
SMARCD2-208ENST00000580054 DDX60Q8IY21 1712 aaKnown RBP12.38□□□□□ -0.43
SMARCD2-208ENST00000580054 ZNF157P51786 506 aaPredicted RBP12.38□□□□□ -0.43
SMARCD2-208ENST00000580054 TNIP1Q15025 636 aa12.38□□□□□ -0.43
SMARCD2-208ENST00000580054 TBC1D10BQ4KMP7 808 aaPredicted RBP12.38□□□□□ -0.43
SMARCD2-208ENST00000580054 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
SMARCD2-208ENST00000580054 MPNDQ8N594 471 aa12.38□□□□□ -0.43
SMARCD2-208ENST00000580054 SUPT20HQ8NEM7 779 aa12.38□□□□□ -0.43
SMARCD2-208ENST00000580054 COL4A1P02462 1669 aa12.38□□□□□ -0.43
SMARCD2-208ENST00000580054 H7C1D1 291 aa12.37□□□□□ -0.43
SMARCD2-208ENST00000580054 SLC10A3P09131 477 aa12.37□□□□□ -0.43
SMARCD2-208ENST00000580054 NLRP3Q96P20 1036 aa12.37□□□□□ -0.43
SMARCD2-208ENST00000580054 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
SMARCD2-208ENST00000580054 TMX4Q9H1E5 349 aaPredicted RBP12.37□□□□□ -0.43
SMARCD2-208ENST00000580054 MKI67P46013 3256 aaKnown RBP12.36□□□□□ -0.43
SMARCD2-208ENST00000580054 PSMD14O00487 310 aa12.36□□□□□ -0.43
SMARCD2-208ENST00000580054 C2orf69Q8N8R5 385 aa12.36□□□□□ -0.43
SMARCD2-208ENST00000580054 CCDC102AQ96A19 550 aa12.36□□□□□ -0.43
SMARCD2-208ENST00000580054 ASTN2O75129 1339 aaPredicted RBP12.36□□□□□ -0.43
SMARCD2-208ENST00000580054 TAF7Q15545 349 aaPredicted RBP12.35□□□□□ -0.43
SMARCD2-208ENST00000580054 RBM26Q5T8P6 1007 aaKnown RBP12.35□□□□□ -0.43
SMARCD2-208ENST00000580054 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
SMARCD2-208ENST00000580054 PPP1R42Q7Z4L9 355 aa12.35□□□□□ -0.43
SMARCD2-208ENST00000580054 RASAL3Q86YV0 1011 aa12.35□□□□□ -0.43
SMARCD2-208ENST00000580054 SP8Q8IXZ3 490 aa12.35□□□□□ -0.43
SMARCD2-208ENST00000580054 DBNDD1Q9H9R9 158 aa12.35□□□□□ -0.43
SMARCD2-208ENST00000580054 PAPPA2Q9BXP8 1791 aa12.34□□□□□ -0.43
SMARCD2-208ENST00000580054 U2AF1L5P0DN76 240 aaPredicted RBP12.34□□□□□ -0.43
SMARCD2-208ENST00000580054 U2AF1Q01081 240 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMARCD2-208ENST00000580054 PARP10Q53GL7 1025 aa12.34□□□□□ -0.43
SMARCD2-208ENST00000580054 THUMPD2Q9BTF0 503 aaKnown RBP12.34□□□□□ -0.43
SMARCD2-208ENST00000580054 UTP14AQ9BVJ6 771 aaKnown RBP12.34□□□□□ -0.43
SMARCD2-208ENST00000580054 GGA3Q9NZ52 723 aa12.34□□□□□ -0.43
SMARCD2-208ENST00000580054 RTL9Q8NET4 1388 aa12.33□□□□□ -0.44
SMARCD2-208ENST00000580054 HCLS1P14317 486 aaPredicted RBP12.33□□□□□ -0.44
SMARCD2-208ENST00000580054 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
SMARCD2-208ENST00000580054 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
SMARCD2-208ENST00000580054 DPF2Q92785 391 aa12.33□□□□□ -0.44
SMARCD2-208ENST00000580054 DCPSQ96C86 337 aaKnown RBP12.33□□□□□ -0.44
SMARCD2-208ENST00000580054 CDCA5Q96FF9 252 aa12.33□□□□□ -0.44
SMARCD2-208ENST00000580054 KCNQ5Q9NR82 932 aa12.33□□□□□ -0.44
SMARCD2-208ENST00000580054 HTTP42858 3142 aa12.33□□□□□ -0.44
SMARCD2-208ENST00000580054 PSME4Q14997 1843 aa12.32□□□□□ -0.44
SMARCD2-208ENST00000580054 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
SMARCD2-208ENST00000580054 BBOX1O75936 387 aa12.32□□□□□ -0.44
SMARCD2-208ENST00000580054 GRAPQ13588 217 aa12.32□□□□□ -0.44
SMARCD2-208ENST00000580054 KIF4BQ2VIQ3 1234 aa12.32□□□□□ -0.44
SMARCD2-208ENST00000580054 LRP10Q7Z4F1 713 aa12.32□□□□□ -0.44
SMARCD2-208ENST00000580054 GRAPLQ8TC17 118 aaPredicted RBP12.32□□□□□ -0.44
SMARCD2-208ENST00000580054 ZNF296Q8WUU4 475 aaPredicted RBP12.32□□□□□ -0.44
SMARCD2-208ENST00000580054 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
SMARCD2-208ENST00000580054 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
SMARCD2-208ENST00000580054 TBC1D8O95759 1140 aa12.31□□□□□ -0.44
SMARCD2-208ENST00000580054 ANXA1P04083 346 aa12.31□□□□□ -0.44
SMARCD2-208ENST00000580054 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
SMARCD2-208ENST00000580054 HABP4Q5JVS0 413 aaKnown RBP12.31□□□□□ -0.44
SMARCD2-208ENST00000580054 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
SMARCD2-208ENST00000580054 CFAP53Q96M91 514 aa12.31□□□□□ -0.44
SMARCD2-208ENST00000580054 HDAC9Q9UKV0 1011 aa12.31□□□□□ -0.44
SMARCD2-208ENST00000580054 KIAA0100Q14667 2235 aaKnown RBP12.31□□□□□ -0.44
SMARCD2-208ENST00000580054 ECE2O60344 883 aa12.3□□□□□ -0.44
SMARCD2-208ENST00000580054 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
SMARCD2-208ENST00000580054 MOB2Q70IA6 237 aa12.3□□□□□ -0.44
SMARCD2-208ENST00000580054 SULF1Q8IWU6 871 aa12.3□□□□□ -0.44
SMARCD2-208ENST00000580054 NUDCQ9Y266 331 aa12.3□□□□□ -0.44
SMARCD2-208ENST00000580054 RBBP6Q7Z6E9 1792 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 RPS12P25398 132 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 PDIA6Q15084 440 aa12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 PKN2Q16513 984 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 WASHC4Q2M389 1173 aa12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 NLRP10Q86W26 655 aa12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 PNISRQ8TF01 805 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 POLLQ9UGP5 575 aa12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 SCAF8Q9UPN6 1271 aaKnown RBP12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 ERBB4Q15303 1308 aa12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 CENPFP49454 3210 aa12.29□□□□□ -0.44
SMARCD2-208ENST00000580054 GPSM2P81274 684 aa12.28□□□□□ -0.44
SMARCD2-208ENST00000580054 ANGEL2Q5VTE6 544 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms