RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 NOM1Q5C9Z4 860 aaKnown RBP11.9□□□□□ -0.5
SNX11-205ENST00000578861 CC2D1BQ5T0F9 858 aaKnown RBP11.9□□□□□ -0.5
SNX11-205ENST00000578861 MOB2Q70IA6 237 aa11.9□□□□□ -0.5
SNX11-205ENST00000578861 SUPT20HQ8NEM7 779 aa11.9□□□□□ -0.5
SNX11-205ENST00000578861 SNED1Q8TER0 1413 aa11.9□□□□□ -0.5
SNX11-205ENST00000578861 RBM17Q96I25 401 aaKnown RBP11.9□□□□□ -0.5
SNX11-205ENST00000578861 LRCH3Q96II8 777 aa11.9□□□□□ -0.5
SNX11-205ENST00000578861 ARFGEF2Q9Y6D5 1785 aa11.9□□□□□ -0.51
SNX11-205ENST00000578861 KIF7Q2M1P5 1343 aa11.89□□□□□ -0.51
SNX11-205ENST00000578861 TM4SF4P48230 202 aa11.89□□□□□ -0.51
SNX11-205ENST00000578861 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
SNX11-205ENST00000578861 MTHFSDQ2M296 383 aaKnown RBP11.89□□□□□ -0.51
SNX11-205ENST00000578861 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
SNX11-205ENST00000578861 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
SNX11-205ENST00000578861 PTPN22Q9Y2R2 807 aa11.89□□□□□ -0.51
SNX11-205ENST00000578861 UBR2Q8IWV8 1755 aa11.88□□□□□ -0.51
SNX11-205ENST00000578861 SOX1O00570 391 aaPredicted RBP11.88□□□□□ -0.51
SNX11-205ENST00000578861 DIAPH1O60610 1272 aaKnown RBP11.88□□□□□ -0.51
SNX11-205ENST00000578861 CRY2Q49AN0 593 aa11.88□□□□□ -0.51
SNX11-205ENST00000578861 DPP8Q6V1X1 898 aaPredicted RBP11.88□□□□□ -0.51
SNX11-205ENST00000578861 GGA3Q9NZ52 723 aa11.88□□□□□ -0.51
SNX11-205ENST00000578861 MRC1P22897 1456 aa11.88□□□□□ -0.51
SNX11-205ENST00000578861 KIAA0100Q14667 2235 aaKnown RBP11.87□□□□□ -0.51
SNX11-205ENST00000578861 SREBF2Q12772 1141 aa11.87□□□□□ -0.51
SNX11-205ENST00000578861 MPNDQ8N594 471 aa11.87□□□□□ -0.51
SNX11-205ENST00000578861 ARMC5Q96C12 935 aa11.87□□□□□ -0.51
SNX11-205ENST00000578861 PRDM6Q9NQX0 595 aa11.87□□□□□ -0.51
SNX11-205ENST00000578861 HEG1Q9ULI3 1381 aa11.87□□□□□ -0.51
SNX11-205ENST00000578861 ASTN2O75129 1339 aaPredicted RBP11.86□□□□□ -0.51
SNX11-205ENST00000578861 WTIPA6NIX2 430 aaPredicted RBP11.86□□□□□ -0.51
SNX11-205ENST00000578861 HOXA10P31260 410 aaPredicted RBP11.86□□□□□ -0.51
SNX11-205ENST00000578861 ZNF790Q6PG37 636 aa11.86□□□□□ -0.51
SNX11-205ENST00000578861 DEFB123Q8N688 67 aa11.86□□□□□ -0.51
SNX11-205ENST00000578861 SCN7AQ01118 1682 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 YDJCA8MPS7 323 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 PSMD14O00487 310 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 U2SURPO15042 1029 aaKnown RBP11.85□□□□□ -0.51
SNX11-205ENST00000578861 FKBP1BP68106 108 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 KIAA2012Q0VF49 1180 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 TEFQ10587 303 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 KIF4BQ2VIQ3 1234 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 CD99L2Q8TCZ2 262 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 DPF2Q92785 391 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 FMNL2Q96PY5 1086 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 CRAMP1Q96RY5 1269 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 EFCC1Q9HA90 598 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 ATP6V0A2Q9Y487 856 aa11.85□□□□□ -0.51
SNX11-205ENST00000578861 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
SNX11-205ENST00000578861 ABCC12Q96J65 1359 aa11.84□□□□□ -0.51
SNX11-205ENST00000578861 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
SNX11-205ENST00000578861 HLFQ16534 295 aa11.84□□□□□ -0.51
SNX11-205ENST00000578861 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
SNX11-205ENST00000578861 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
SNX11-205ENST00000578861 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
SNX11-205ENST00000578861 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNX11-205ENST00000578861 ERO1AQ96HE7 468 aa11.84□□□□□ -0.51
SNX11-205ENST00000578861 SCAF8Q9UPN6 1271 aaKnown RBP11.84□□□□□ -0.51
SNX11-205ENST00000578861 COL9A1P20849 921 aa11.83□□□□□ -0.52
SNX11-205ENST00000578861 TCIRG1Q13488 830 aa11.83□□□□□ -0.52
SNX11-205ENST00000578861 SLC9C1Q4G0N8 1177 aa11.83□□□□□ -0.52
SNX11-205ENST00000578861 ANGEL2Q5VTE6 544 aaKnown RBP11.83□□□□□ -0.52
SNX11-205ENST00000578861 Q7L0L9 218 aa11.83□□□□□ -0.52
SNX11-205ENST00000578861 ZNF333Q96JL9 665 aa11.83□□□□□ -0.52
SNX11-205ENST00000578861 USP16Q9Y5T5 823 aa11.83□□□□□ -0.52
SNX11-205ENST00000578861 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
SNX11-205ENST00000578861 PAPPA2Q9BXP8 1791 aa11.82□□□□□ -0.52
SNX11-205ENST00000578861 ALDH1A1P00352 501 aa11.82□□□□□ -0.52
SNX11-205ENST00000578861 SCARF1Q14162 830 aa11.82□□□□□ -0.52
SNX11-205ENST00000578861 NGEFQ8N5V2 710 aa11.82□□□□□ -0.52
SNX11-205ENST00000578861 IL17REQ8NFR9 667 aa11.82□□□□□ -0.52
SNX11-205ENST00000578861 RTFDC1Q9BY42 306 aaPredicted RBP11.82□□□□□ -0.52
SNX11-205ENST00000578861 STXBP5LQ9Y2K9 1186 aa11.82□□□□□ -0.52
SNX11-205ENST00000578861 GNAT3A8MTJ3 354 aa11.81□□□□□ -0.52
SNX11-205ENST00000578861 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
SNX11-205ENST00000578861 GPTP24298 496 aa11.81□□□□□ -0.52
SNX11-205ENST00000578861 PRKG1Q13976 671 aa11.81□□□□□ -0.52
SNX11-205ENST00000578861 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
SNX11-205ENST00000578861 CFHR5Q9BXR6 569 aa11.81□□□□□ -0.52
SNX11-205ENST00000578861 DBNDD1Q9H9R9 158 aa11.81□□□□□ -0.52
SNX11-205ENST00000578861 NR2E3Q9Y5X4 410 aa11.81□□□□□ -0.52
SNX11-205ENST00000578861 COL3A1P02461 1466 aaPredicted RBP11.81□□□□□ -0.52
SNX11-205ENST00000578861 KCNQ3O43525 872 aa11.8□□□□□ -0.52
SNX11-205ENST00000578861 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
SNX11-205ENST00000578861 PRO3102Q9H379 93 aa11.8□□□□□ -0.52
SNX11-205ENST00000578861 KCNQ5Q9NR82 932 aa11.8□□□□□ -0.52
SNX11-205ENST00000578861 HTTP42858 3142 aa11.8□□□□□ -0.52
SNX11-205ENST00000578861 RPS12P25398 132 aaKnown RBP11.79□□□□□ -0.52
SNX11-205ENST00000578861 RAPGEFL1Q9UHV5 662 aa11.79□□□□□ -0.52
SNX11-205ENST00000578861 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
SNX11-205ENST00000578861 DOK7Q18PE1 504 aa11.78□□□□□ -0.52
SNX11-205ENST00000578861 WASHC4Q2M389 1173 aa11.78□□□□□ -0.52
SNX11-205ENST00000578861 IFNL1Q8IU54 200 aa11.78□□□□□ -0.52
SNX11-205ENST00000578861 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
SNX11-205ENST00000578861 PHACTR3Q96KR7 559 aa11.78□□□□□ -0.52
SNX11-205ENST00000578861 NLRP3Q96P20 1036 aa11.78□□□□□ -0.52
SNX11-205ENST00000578861 HTATIP2Q9BUP3 242 aa11.78□□□□□ -0.52
SNX11-205ENST00000578861 STAP2Q9UGK3 403 aa11.78□□□□□ -0.52
SNX11-205ENST00000578861 PTCH2Q9Y6C5 1203 aa11.78□□□□□ -0.52
SNX11-205ENST00000578861 BRCA2P51587 3418 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms