RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
UBB-208ENST00000578706 REM2Q8IYK8 340 aaPredicted RBP8.45□□□□□ -1.06
UBB-208ENST00000578706 BCL2L13Q9BXK5 485 aa8.45□□□□□ -1.06
UBB-208ENST00000578706 RTFDC1Q9BY42 306 aaPredicted RBP8.45□□□□□ -1.06
UBB-208ENST00000578706 PRO3102Q9H379 93 aa8.45□□□□□ -1.06
UBB-208ENST00000578706 ZBTB12Q9Y330 459 aaPredicted RBP8.45□□□□□ -1.06
UBB-208ENST00000578706 KIF7Q2M1P5 1343 aa8.45□□□□□ -1.06
UBB-208ENST00000578706 LAMB2P55268 1798 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 PPEF1O14829 653 aaPredicted RBP8.44□□□□□ -1.06
UBB-208ENST00000578706 KCNQ3O43525 872 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 FKTNO75072 461 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 CAP1Q01518 475 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 HLFQ16534 295 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 MTHFSDQ2M296 383 aaKnown RBP8.44□□□□□ -1.06
UBB-208ENST00000578706 TBC1D10BQ4KMP7 808 aaPredicted RBP8.44□□□□□ -1.06
UBB-208ENST00000578706 GRIPAP1Q4V328 841 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 INTS3Q68E01 1043 aaKnown RBP8.44□□□□□ -1.06
UBB-208ENST00000578706 MOB2Q70IA6 237 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 NPM2Q86SE8 214 aaKnown RBP8.44□□□□□ -1.06
UBB-208ENST00000578706 TTC5Q8N0Z6 440 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 ARMC5Q96C12 935 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 CDCA5Q96FF9 252 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 CFHR5Q9BXR6 569 aa8.44□□□□□ -1.06
UBB-208ENST00000578706 COL25A1Q9BXS0 654 aaPredicted RBP8.44□□□□□ -1.06
UBB-208ENST00000578706 TEX13AQ9BXU3 409 aaPredicted RBP8.44□□□□□ -1.06
UBB-208ENST00000578706 LAMB1P07942 1786 aa8.43□□□□□ -1.06
UBB-208ENST00000578706 TAF1P21675 1872 aa8.43□□□□□ -1.06
UBB-208ENST00000578706 SCN9AQ15858 1988 aa8.43□□□□□ -1.06
UBB-208ENST00000578706 NBPF26B4DH59 902 aa8.43□□□□□ -1.06
UBB-208ENST00000578706 SOX1O00570 391 aaPredicted RBP8.43□□□□□ -1.06
UBB-208ENST00000578706 TM4SF4P48230 202 aa8.43□□□□□ -1.06
UBB-208ENST00000578706 KIAA2012Q0VF49 1180 aa8.43□□□□□ -1.06
UBB-208ENST00000578706 NBPF10Q6P3W6 841 aaKnown RBP8.43□□□□□ -1.06
UBB-208ENST00000578706 OTOP1Q7RTM1 612 aa8.43□□□□□ -1.06
UBB-208ENST00000578706 USP16Q9Y5T5 823 aa8.43□□□□□ -1.06
UBB-208ENST00000578706 LRRC37AA6NMS7 1700 aa8.43□□□□□ -1.06
UBB-208ENST00000578706 LAMB4A4D0S4 1761 aa8.43□□□□□ -1.06
UBB-208ENST00000578706 H7C1D1 291 aa8.42□□□□□ -1.06
UBB-208ENST00000578706 IL17REQ8NFR9 667 aa8.42□□□□□ -1.06
UBB-208ENST00000578706 RPGRQ92834 1020 aaKnown RBP8.42□□□□□ -1.06
UBB-208ENST00000578706 CRAMP1Q96RY5 1269 aa8.42□□□□□ -1.06
UBB-208ENST00000578706 POLR3GLQ9BT43 218 aa8.42□□□□□ -1.06
UBB-208ENST00000578706 VPS33BQ9H267 617 aa8.42□□□□□ -1.06
UBB-208ENST00000578706 ZNF652Q9Y2D9 606 aa8.42□□□□□ -1.06
UBB-208ENST00000578706 ATP6V0A2Q9Y487 856 aa8.42□□□□□ -1.06
UBB-208ENST00000578706 TRIM17Q9Y577 477 aa8.42□□□□□ -1.06
UBB-208ENST00000578706 ZNF609O15014 1411 aa8.42□□□□□ -1.06
UBB-208ENST00000578706 UBN2Q6ZU65 1347 aa8.41□□□□□ -1.06
UBB-208ENST00000578706 RGL2O15211 777 aa8.41□□□□□ -1.06
UBB-208ENST00000578706 TNIP1Q15025 636 aa8.41□□□□□ -1.06
UBB-208ENST00000578706 DPF2Q92785 391 aa8.41□□□□□ -1.06
UBB-208ENST00000578706 FMNL2Q96PY5 1086 aa8.41□□□□□ -1.06
UBB-208ENST00000578706 GGA3Q9NZ52 723 aa8.41□□□□□ -1.06
UBB-208ENST00000578706 RTL9Q8NET4 1388 aa8.4□□□□□ -1.06
UBB-208ENST00000578706 PSMD14O00487 310 aa8.4□□□□□ -1.06
UBB-208ENST00000578706 NPM3O75607 178 aaKnown RBP8.4□□□□□ -1.06
UBB-208ENST00000578706 HMOX1P09601 288 aa8.4□□□□□ -1.06
UBB-208ENST00000578706 RBM26Q5T8P6 1007 aaKnown RBP8.4□□□□□ -1.06
UBB-208ENST00000578706 MORC1Q86VD1 984 aa8.4□□□□□ -1.06
UBB-208ENST00000578706 DCPSQ96C86 337 aaKnown RBP8.4□□□□□ -1.06
UBB-208ENST00000578706 LRCH3Q96II8 777 aa8.4□□□□□ -1.06
UBB-208ENST00000578706 PTPN22Q9Y2R2 807 aa8.4□□□□□ -1.06
UBB-208ENST00000578706 ANKRD36CQ5JPF3 1778 aa8.4□□□□□ -1.07
UBB-208ENST00000578706 TTC28Q96AY4 2481 aa8.4□□□□□ -1.07
UBB-208ENST00000578706 DDX60Q8IY21 1712 aaKnown RBP8.4□□□□□ -1.07
UBB-208ENST00000578706 IBTKQ9P2D0 1353 aaPredicted RBP8.39□□□□□ -1.07
UBB-208ENST00000578706 ABCC4O15439 1325 aa8.39□□□□□ -1.07
UBB-208ENST00000578706 UBE2Q2LH0YL09 131 aa8.39□□□□□ -1.07
UBB-208ENST00000578706 GTF2E1P29083 439 aaPredicted RBP8.39□□□□□ -1.07
UBB-208ENST00000578706 MKRN3Q13064 507 aaKnown RBP8.39□□□□□ -1.07
UBB-208ENST00000578706 SULF1Q8IWU6 871 aa8.39□□□□□ -1.07
UBB-208ENST00000578706 RBM17Q96I25 401 aaKnown RBP8.39□□□□□ -1.07
UBB-208ENST00000578706 ZNF333Q96JL9 665 aa8.39□□□□□ -1.07
UBB-208ENST00000578706 KCNQ5Q9NR82 932 aa8.39□□□□□ -1.07
UBB-208ENST00000578706 COL4A1P02462 1669 aa8.39□□□□□ -1.07
UBB-208ENST00000578706 CEMIPQ8WUJ3 1361 aa8.38□□□□□ -1.07
UBB-208ENST00000578706 FKBP1BP68106 108 aa8.38□□□□□ -1.07
UBB-208ENST00000578706 EIF4G2P78344 907 aaKnown RBP eCLIP8.38□□□□□ -1.07
UBB-208ENST00000578706 KIF4BQ2VIQ3 1234 aa8.38□□□□□ -1.07
UBB-208ENST00000578706 DPP8Q6V1X1 898 aaPredicted RBP8.38□□□□□ -1.07
UBB-208ENST00000578706 SUPT20HQ8NEM7 779 aa8.38□□□□□ -1.07
UBB-208ENST00000578706 SCAF8Q9UPN6 1271 aaKnown RBP8.38□□□□□ -1.07
UBB-208ENST00000578706 PSME4Q14997 1843 aa8.38□□□□□ -1.07
UBB-208ENST00000578706 EYSQ5T1H1 3165 aa8.37□□□□□ -1.07
UBB-208ENST00000578706 NTSR2O95665 410 aa8.37□□□□□ -1.07
UBB-208ENST00000578706 DDX10Q13206 875 aaKnown RBP8.37□□□□□ -1.07
UBB-208ENST00000578706 ANGEL2Q5VTE6 544 aaKnown RBP8.37□□□□□ -1.07
UBB-208ENST00000578706 SUSD4Q5VX71 490 aa8.37□□□□□ -1.07
UBB-208ENST00000578706 NYXQ9GZU5 481 aa8.37□□□□□ -1.07
UBB-208ENST00000578706 PANK3Q9H999 370 aa8.37□□□□□ -1.07
UBB-208ENST00000578706 ZSWIM8A7E2V4 1837 aa8.37□□□□□ -1.07
UBB-208ENST00000578706 HSPA5P11021 654 aaKnown RBP8.36□□□□□ -1.07
UBB-208ENST00000578706 GPTP24298 496 aa8.36□□□□□ -1.07
UBB-208ENST00000578706 TEFQ10587 303 aa8.36□□□□□ -1.07
UBB-208ENST00000578706 PRAMEF18Q5VWM3 479 aa8.36□□□□□ -1.07
UBB-208ENST00000578706 SP8Q8IXZ3 490 aa8.36□□□□□ -1.07
UBB-208ENST00000578706 MPNDQ8N594 471 aa8.36□□□□□ -1.07
UBB-208ENST00000578706 CD99L2Q8TCZ2 262 aa8.36□□□□□ -1.07
UBB-208ENST00000578706 SHISA4Q96DD7 197 aa8.36□□□□□ -1.07
UBB-208ENST00000578706 DBNDD1Q9H9R9 158 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms