RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 RPTORQ8N122 1335 aa8.36□□□□□ -1.07
SNX11-204ENST00000577310 IL6STP40189 918 aaPredicted RBP8.36□□□□□ -1.07
SNX11-204ENST00000577310 LRIT3Q3SXY7 679 aa8.36□□□□□ -1.07
SNX11-204ENST00000577310 C1orf141Q5JVX7 400 aa8.36□□□□□ -1.07
SNX11-204ENST00000577310 SULF1Q8IWU6 871 aa8.36□□□□□ -1.07
SNX11-204ENST00000577310 MICALL2Q8IY33 904 aa8.36□□□□□ -1.07
SNX11-204ENST00000577310 DPF2Q92785 391 aa8.36□□□□□ -1.07
SNX11-204ENST00000577310 CDCA5Q96FF9 252 aa8.36□□□□□ -1.07
SNX11-204ENST00000577310 EMILIN1Q9Y6C2 1016 aa8.36□□□□□ -1.07
SNX11-204ENST00000577310 TAF1P21675 1872 aa8.36□□□□□ -1.07
SNX11-204ENST00000577310 TNFRSF10AO00220 468 aa8.35□□□□□ -1.07
SNX11-204ENST00000577310 CAMTA2O94983 1202 aa8.35□□□□□ -1.07
SNX11-204ENST00000577310 BMP8BP34820 402 aa8.35□□□□□ -1.07
SNX11-204ENST00000577310 MAP3K12Q12852 859 aa8.35□□□□□ -1.07
SNX11-204ENST00000577310 AOC3Q16853 763 aa8.35□□□□□ -1.07
SNX11-204ENST00000577310 SLC9C1Q4G0N8 1177 aa8.35□□□□□ -1.07
SNX11-204ENST00000577310 CLEC4GQ6UXB4 293 aa8.35□□□□□ -1.07
SNX11-204ENST00000577310 SAMD7Q7Z3H4 446 aa8.35□□□□□ -1.07
SNX11-204ENST00000577310 ZBTB12Q9Y330 459 aaPredicted RBP8.35□□□□□ -1.07
SNX11-204ENST00000577310 ROCK2O75116 1388 aaKnown RBP8.35□□□□□ -1.07
SNX11-204ENST00000577310 SHTN1A0MZ66 631 aa8.34□□□□□ -1.07
SNX11-204ENST00000577310 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
SNX11-204ENST00000577310 INHBEP58166 350 aa8.34□□□□□ -1.07
SNX11-204ENST00000577310 CRY2Q49AN0 593 aa8.34□□□□□ -1.07
SNX11-204ENST00000577310 NPM2Q86SE8 214 aaKnown RBP8.34□□□□□ -1.07
SNX11-204ENST00000577310 SUPT20HQ8NEM7 779 aa8.34□□□□□ -1.07
SNX11-204ENST00000577310 STAP2Q9UGK3 403 aa8.34□□□□□ -1.07
SNX11-204ENST00000577310 MUC6Q6W4X9 2439 aa8.33□□□□□ -1.08
SNX11-204ENST00000577310 PPM1GO15355 546 aaPredicted RBP8.33□□□□□ -1.08
SNX11-204ENST00000577310 RAD17O75943 681 aa8.33□□□□□ -1.08
SNX11-204ENST00000577310 ARHGEF6Q15052 776 aa8.33□□□□□ -1.08
SNX11-204ENST00000577310 TBC1D10BQ4KMP7 808 aaPredicted RBP8.33□□□□□ -1.08
SNX11-204ENST00000577310 UBE2Q1Q7Z7E8 422 aa8.33□□□□□ -1.08
SNX11-204ENST00000577310 CD99L2Q8TCZ2 262 aa8.33□□□□□ -1.08
SNX11-204ENST00000577310 SLC52A2Q9HAB3 445 aa8.33□□□□□ -1.08
SNX11-204ENST00000577310 RAB3GAP2Q9H2M9 1393 aa8.33□□□□□ -1.08
SNX11-204ENST00000577310 KIF7Q2M1P5 1343 aa8.32□□□□□ -1.08
SNX11-204ENST00000577310 TMEM265A0A087WTH1 108 aa8.32□□□□□ -1.08
SNX11-204ENST00000577310 EGFRP00533 1210 aa8.32□□□□□ -1.08
SNX11-204ENST00000577310 SLC39A6Q13433 755 aa8.32□□□□□ -1.08
SNX11-204ENST00000577310 NKX2-3Q8TAU0 364 aa8.32□□□□□ -1.08
SNX11-204ENST00000577310 TEX13AQ9BXU3 409 aaPredicted RBP8.32□□□□□ -1.08
SNX11-204ENST00000577310 RTFDC1Q9BY42 306 aaPredicted RBP8.32□□□□□ -1.08
SNX11-204ENST00000577310 TMX4Q9H1E5 349 aaPredicted RBP8.32□□□□□ -1.08
SNX11-204ENST00000577310 ALPK3Q96L96 1907 aa8.31□□□□□ -1.08
SNX11-204ENST00000577310 PRAMEF22A3QJZ6 481 aa8.31□□□□□ -1.08
SNX11-204ENST00000577310 UBE2Q2LH0YL09 131 aa8.31□□□□□ -1.08
SNX11-204ENST00000577310 PPEF1O14829 653 aaPredicted RBP8.31□□□□□ -1.08
SNX11-204ENST00000577310 RGL2O15211 777 aa8.31□□□□□ -1.08
SNX11-204ENST00000577310 SP3Q02447 781 aa8.31□□□□□ -1.08
SNX11-204ENST00000577310 FAM109BQ6ICB4 259 aaPredicted RBP8.31□□□□□ -1.08
SNX11-204ENST00000577310 IFNL1Q8IU54 200 aa8.31□□□□□ -1.08
SNX11-204ENST00000577310 SHISA4Q96DD7 197 aa8.31□□□□□ -1.08
SNX11-204ENST00000577310 GDF15Q99988 308 aa8.31□□□□□ -1.08
SNX11-204ENST00000577310 ZNF652Q9Y2D9 606 aa8.31□□□□□ -1.08
SNX11-204ENST00000577310 ZNF330Q9Y3S2 320 aaPredicted RBP8.31□□□□□ -1.08
SNX11-204ENST00000577310 EVI5O60447 810 aa8.3□□□□□ -1.08
SNX11-204ENST00000577310 RPS12P25398 132 aaKnown RBP8.3□□□□□ -1.08
SNX11-204ENST00000577310 KIAA2012Q0VF49 1180 aa8.3□□□□□ -1.08
SNX11-204ENST00000577310 EIF4A2Q14240 407 aaKnown RBP8.3□□□□□ -1.08
SNX11-204ENST00000577310 DZIP3Q86Y13 1208 aaKnown RBP8.3□□□□□ -1.08
SNX11-204ENST00000577310 RPGRQ92834 1020 aaKnown RBP8.3□□□□□ -1.08
SNX11-204ENST00000577310 GUCD1Q96NT3 240 aa8.3□□□□□ -1.08
SNX11-204ENST00000577310 CRAMP1Q96RY5 1269 aa8.3□□□□□ -1.08
SNX11-204ENST00000577310 GGA3Q9NZ52 723 aa8.3□□□□□ -1.08
SNX11-204ENST00000577310 PTCH2Q9Y6C5 1203 aa8.3□□□□□ -1.08
SNX11-204ENST00000577310 RIC1Q4ADV7 1423 aa8.29□□□□□ -1.08
SNX11-204ENST00000577310 MANSC4A6NHS7 340 aaPredicted RBP8.29□□□□□ -1.08
SNX11-204ENST00000577310 POTEB2H3BUK9 544 aa8.29□□□□□ -1.08
SNX11-204ENST00000577310 GTF2E1P29083 439 aaPredicted RBP8.29□□□□□ -1.08
SNX11-204ENST00000577310 BCAMP50895 628 aa8.29□□□□□ -1.08
SNX11-204ENST00000577310 MKRN3Q13064 507 aaKnown RBP8.29□□□□□ -1.08
SNX11-204ENST00000577310 TCIRG1Q13488 830 aa8.29□□□□□ -1.08
SNX11-204ENST00000577310 RBM26Q5T8P6 1007 aaKnown RBP8.29□□□□□ -1.08
SNX11-204ENST00000577310 MOB2Q70IA6 237 aa8.29□□□□□ -1.08
SNX11-204ENST00000577310 YDJCA8MPS7 323 aa8.28□□□□□ -1.08
SNX11-204ENST00000577310 MYCP01106 439 aaPredicted RBP8.28□□□□□ -1.08
SNX11-204ENST00000577310 GJA8P48165 433 aa8.28□□□□□ -1.08
SNX11-204ENST00000577310 CAP1Q01518 475 aa8.28□□□□□ -1.08
SNX11-204ENST00000577310 KIF4BQ2VIQ3 1234 aa8.28□□□□□ -1.08
SNX11-204ENST00000577310 SPRYD7Q5W111 196 aa8.28□□□□□ -1.08
SNX11-204ENST00000577310 TDHQ8IZJ6 230 aa8.28□□□□□ -1.08
SNX11-204ENST00000577310 RBM17Q96I25 401 aaKnown RBP8.28□□□□□ -1.08
SNX11-204ENST00000577310 ZNF496Q96IT1 587 aaPredicted RBP8.28□□□□□ -1.08
SNX11-204ENST00000577310 NIP7Q9Y221 180 aaKnown RBP eCLIP8.28□□□□□ -1.08
SNX11-204ENST00000577310 ATP6V0A2Q9Y487 856 aa8.28□□□□□ -1.08
SNX11-204ENST00000577310 DDX60Q8IY21 1712 aaKnown RBP8.27□□□□□ -1.09
SNX11-204ENST00000577310 TCERG1O14776 1098 aaKnown RBP8.27□□□□□ -1.09
SNX11-204ENST00000577310 CRHR2Q13324 411 aa8.27□□□□□ -1.09
SNX11-204ENST00000577310 OTUD7BQ6GQQ9 843 aa8.27□□□□□ -1.09
SNX11-204ENST00000577310 SH3TC2Q8TF17 1288 aa8.27□□□□□ -1.09
SNX11-204ENST00000577310 IRS2Q9Y4H2 1338 aa8.27□□□□□ -1.09
SNX11-204ENST00000577310 NUP98P52948 1817 aa8.26□□□□□ -1.09
SNX11-204ENST00000577310 IGF2BP3O00425 579 aaKnown RBP eCLIP8.26□□□□□ -1.09
SNX11-204ENST00000577310 PSMD14O00487 310 aa8.26□□□□□ -1.09
SNX11-204ENST00000577310 SLC24A1O60721 1099 aa8.26□□□□□ -1.09
SNX11-204ENST00000577310 GJB1P08034 283 aa8.26□□□□□ -1.09
SNX11-204ENST00000577310 TTLL12Q14166 644 aaPredicted RBP8.26□□□□□ -1.09
SNX11-204ENST00000577310 TJAP1Q5JTD0 557 aa8.26□□□□□ -1.09
SNX11-204ENST00000577310 ANGEL2Q5VTE6 544 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms