RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
RAB40B-211ENST00000576359 PDRG1Q9NUG6 133 aa16.87■□□□□ 0.29
RAB40B-211ENST00000576359 TAF6LQ9Y6J9 622 aa16.87■□□□□ 0.29
RAB40B-211ENST00000576359 ATG9AQ7Z3C6 839 aa16.87■□□□□ 0.29
RAB40B-211ENST00000576359 ESPNB1AK53 854 aa16.86■□□□□ 0.29
RAB40B-211ENST00000576359 CHGBP05060 677 aa16.86■□□□□ 0.29
RAB40B-211ENST00000576359 ANP32BQ92688 251 aaKnown RBP16.86■□□□□ 0.29
RAB40B-211ENST00000576359 PPP1R9BQ96SB3 815 aa16.86■□□□□ 0.29
RAB40B-211ENST00000576359 RBSNQ9H1K0 784 aa16.86■□□□□ 0.29
RAB40B-211ENST00000576359 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
RAB40B-211ENST00000576359 CYP46A1Q9Y6A2 500 aa16.86■□□□□ 0.29
RAB40B-211ENST00000576359 ST3GAL1Q11201 340 aa16.86■□□□□ 0.29
RAB40B-211ENST00000576359 DTNBO60941 627 aa16.85■□□□□ 0.29
RAB40B-211ENST00000576359 ZKSCAN1P17029 563 aaPredicted RBP16.85■□□□□ 0.29
RAB40B-211ENST00000576359 KCNJ4P48050 445 aa16.85■□□□□ 0.29
RAB40B-211ENST00000576359 SYCE3A1L190 88 aa16.85■□□□□ 0.29
RAB40B-211ENST00000576359 CCDC191Q8NCU4 936 aa16.85■□□□□ 0.29
RAB40B-211ENST00000576359 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.85■□□□□ 0.29
RAB40B-211ENST00000576359 ZNF609O15014 1411 aa16.84■□□□□ 0.29
RAB40B-211ENST00000576359 HAUS7Q99871 368 aa16.84■□□□□ 0.29
RAB40B-211ENST00000576359 GDPD2Q9HCC8 539 aa16.84■□□□□ 0.29
RAB40B-211ENST00000576359 TMOD3Q9NYL9 352 aa16.84■□□□□ 0.29
RAB40B-211ENST00000576359 ASAP1Q9ULH1 1129 aa16.84■□□□□ 0.29
RAB40B-211ENST00000576359 TAF5LO75529 589 aa16.84■□□□□ 0.29
RAB40B-211ENST00000576359 LRSAM1Q6UWE0 723 aa16.84■□□□□ 0.29
RAB40B-211ENST00000576359 CCDC83Q8IWF9 413 aa16.84■□□□□ 0.29
RAB40B-211ENST00000576359 DNAJC2Q99543 621 aaKnown RBP16.84■□□□□ 0.29
RAB40B-211ENST00000576359 ZNF594Q96JF6 807 aaPredicted RBP16.83■□□□□ 0.28
RAB40B-211ENST00000576359 SYT1P21579 422 aa16.83■□□□□ 0.28
RAB40B-211ENST00000576359 ME3Q16798 604 aa16.83■□□□□ 0.28
RAB40B-211ENST00000576359 LRRC24Q50LG9 513 aa16.83■□□□□ 0.28
RAB40B-211ENST00000576359 PIGBQ92521 554 aa16.83■□□□□ 0.28
RAB40B-211ENST00000576359 BTG4Q9NY30 223 aa16.83■□□□□ 0.28
RAB40B-211ENST00000576359 SMC3Q9UQE7 1217 aa16.83■□□□□ 0.28
RAB40B-211ENST00000576359 CCDC9Q9Y3X0 531 aaKnown RBP16.83■□□□□ 0.28
RAB40B-211ENST00000576359 USP48Q86UV5 1035 aa16.82■□□□□ 0.28
RAB40B-211ENST00000576359 SEC62Q99442 399 aaKnown RBP16.82■□□□□ 0.28
RAB40B-211ENST00000576359 ISCA1Q9BUE6 129 aa16.82■□□□□ 0.28
RAB40B-211ENST00000576359 TPCN1Q9ULQ1 816 aa16.82■□□□□ 0.28
RAB40B-211ENST00000576359 RFX7Q2KHR2 1363 aa16.82■□□□□ 0.28
RAB40B-211ENST00000576359 ITGB4P16144 1822 aa16.82■□□□□ 0.28
RAB40B-211ENST00000576359 GADD45BO75293 160 aaPredicted RBP16.81■□□□□ 0.28
RAB40B-211ENST00000576359 DNAJC10Q8IXB1 793 aa16.81■□□□□ 0.28
RAB40B-211ENST00000576359 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.81■□□□□ 0.28
RAB40B-211ENST00000576359 STX6O43752 255 aa16.81■□□□□ 0.28
RAB40B-211ENST00000576359 ZSCAN22P10073 491 aaPredicted RBP16.81■□□□□ 0.28
RAB40B-211ENST00000576359 TIMM10P62072 90 aa16.81■□□□□ 0.28
RAB40B-211ENST00000576359 USPL1Q5W0Q7 1092 aa16.81■□□□□ 0.28
RAB40B-211ENST00000576359 CCDC129Q6ZRS4 1044 aa16.81■□□□□ 0.28
RAB40B-211ENST00000576359 DDX46Q7L014 1031 aaKnown RBP16.81■□□□□ 0.28
RAB40B-211ENST00000576359 ZSCAN31Q96LW9 406 aaPredicted RBP16.81■□□□□ 0.28
RAB40B-211ENST00000576359 SH2B1Q9NRF2 756 aaPredicted RBP16.81■□□□□ 0.28
RAB40B-211ENST00000576359 NECAB1Q8N987 351 aa16.8■□□□□ 0.28
RAB40B-211ENST00000576359 TCEANC2Q96MN5 208 aa16.8■□□□□ 0.28
RAB40B-211ENST00000576359 ATG3Q9NT62 314 aa16.8■□□□□ 0.28
RAB40B-211ENST00000576359 GJB2P29033 226 aa16.8■□□□□ 0.28
RAB40B-211ENST00000576359 TCIRG1Q13488 830 aa16.8■□□□□ 0.28
RAB40B-211ENST00000576359 PUS3Q9BZE2 481 aaKnown RBP16.8■□□□□ 0.28
RAB40B-211ENST00000576359 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
RAB40B-211ENST00000576359 DISP2A7MBM2 1401 aa16.8■□□□□ 0.28
RAB40B-211ENST00000576359 PSMA5P28066 241 aa16.79■□□□□ 0.28
RAB40B-211ENST00000576359 IL15P40933 162 aaPredicted RBP16.79■□□□□ 0.28
RAB40B-211ENST00000576359 TSGA10IPQ3SY00 556 aa16.79■□□□□ 0.28
RAB40B-211ENST00000576359 RNF20Q5VTR2 975 aa16.79■□□□□ 0.28
RAB40B-211ENST00000576359 NEUROD6Q96NK8 337 aa16.79■□□□□ 0.28
RAB40B-211ENST00000576359 GPR108Q9NPR9 543 aa16.79■□□□□ 0.28
RAB40B-211ENST00000576359 EYA2O00167 538 aa16.79■□□□□ 0.28
RAB40B-211ENST00000576359 RPS6KB1P23443 525 aa16.79■□□□□ 0.28
RAB40B-211ENST00000576359 TOB2Q14106 344 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-211ENST00000576359 SLFNL1Q499Z3 407 aa16.78■□□□□ 0.28
RAB40B-211ENST00000576359 BLOC1S2Q6QNY1 142 aa16.78■□□□□ 0.28
RAB40B-211ENST00000576359 KBTBD3Q8NAB2 608 aa16.78■□□□□ 0.28
RAB40B-211ENST00000576359 SYAP1Q96A49 352 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-211ENST00000576359 CNPY2Q9Y2B0 182 aa16.78■□□□□ 0.28
RAB40B-211ENST00000576359 PALLDQ8WX93 1383 aa16.78■□□□□ 0.28
RAB40B-211ENST00000576359 F13A1P00488 732 aa16.78■□□□□ 0.28
RAB40B-211ENST00000576359 VSIG10Q8N0Z9 540 aa16.78■□□□□ 0.28
RAB40B-211ENST00000576359 TMEM87AQ8NBN3 555 aa16.78■□□□□ 0.28
RAB40B-211ENST00000576359 HMG20BQ9P0W2 317 aa16.78■□□□□ 0.28
RAB40B-211ENST00000576359 GOLIM4O00461 696 aa16.77■□□□□ 0.28
RAB40B-211ENST00000576359 CIAO1O76071 339 aa16.77■□□□□ 0.28
RAB40B-211ENST00000576359 MCMDC2Q4G0Z9 681 aa16.77■□□□□ 0.28
RAB40B-211ENST00000576359 MTMR6Q9Y217 621 aa16.77■□□□□ 0.28
RAB40B-211ENST00000576359 COL14A1Q05707 1796 aaKnown RBP16.77■□□□□ 0.27
RAB40B-211ENST00000576359 SLC4A9Q96Q91 983 aa16.76■□□□□ 0.27
RAB40B-211ENST00000576359 ALDH8A1Q9H2A2 487 aaPredicted RBP16.76■□□□□ 0.27
RAB40B-211ENST00000576359 PAG1Q9NWQ8 432 aa16.76■□□□□ 0.27
RAB40B-211ENST00000576359 A0A1B0GUL7 405 aa16.76■□□□□ 0.27
RAB40B-211ENST00000576359 TRIM28Q13263 835 aaKnown RBP16.76■□□□□ 0.27
RAB40B-211ENST00000576359 FAM89AQ96GI7 184 aa16.76■□□□□ 0.27
RAB40B-211ENST00000576359 COL16A1Q07092 1604 aaPredicted RBP16.76■□□□□ 0.27
RAB40B-211ENST00000576359 SH3TC1Q8TE82 1336 aa16.76■□□□□ 0.27
RAB40B-211ENST00000576359 PDLIM2Q96JY6 352 aa16.75■□□□□ 0.27
RAB40B-211ENST00000576359 TEX13AQ9BXU3 409 aaPredicted RBP16.75■□□□□ 0.27
RAB40B-211ENST00000576359 BCL9O00512 1426 aa16.75■□□□□ 0.27
RAB40B-211ENST00000576359 ATP6V1DQ9Y5K8 247 aa16.75■□□□□ 0.27
RAB40B-211ENST00000576359 PCCAP05165 728 aaPredicted RBP16.74■□□□□ 0.27
RAB40B-211ENST00000576359 CYP21A2P08686 494 aa16.74■□□□□ 0.27
RAB40B-211ENST00000576359 HLFQ16534 295 aa16.74■□□□□ 0.27
RAB40B-211ENST00000576359 KIF6Q6ZMV9 814 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms