RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 RPGRQ92834 1020 aaKnown RBP13.15□□□□□ -0.3
HCFC1R1-206ENST00000574151 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
HCFC1R1-206ENST00000574151 ZBED9Q6R2W3 1325 aa13.14□□□□□ -0.31
HCFC1R1-206ENST00000574151 EGFRP00533 1210 aa13.14□□□□□ -0.31
HCFC1R1-206ENST00000574151 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
HCFC1R1-206ENST00000574151 CNGB1Q14028 1251 aaPredicted RBP13.14□□□□□ -0.31
HCFC1R1-206ENST00000574151 GRIPAP1Q4V328 841 aa13.14□□□□□ -0.31
HCFC1R1-206ENST00000574151 CLEC4GQ6UXB4 293 aa13.14□□□□□ -0.31
HCFC1R1-206ENST00000574151 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
HCFC1R1-206ENST00000574151 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
HCFC1R1-206ENST00000574151 MRC1P22897 1456 aa13.14□□□□□ -0.31
HCFC1R1-206ENST00000574151 RANBP2P49792 3224 aaKnown RBP13.14□□□□□ -0.31
HCFC1R1-206ENST00000574151 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
HCFC1R1-206ENST00000574151 HEG1Q9ULI3 1381 aa13.13□□□□□ -0.31
HCFC1R1-206ENST00000574151 PPEF1O14829 653 aaPredicted RBP13.13□□□□□ -0.31
HCFC1R1-206ENST00000574151 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
HCFC1R1-206ENST00000574151 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
HCFC1R1-206ENST00000574151 MOB2Q70IA6 237 aa13.13□□□□□ -0.31
HCFC1R1-206ENST00000574151 NUTM1Q86Y26 1132 aa13.13□□□□□ -0.31
HCFC1R1-206ENST00000574151 TMEM106CQ9BVX2 250 aa13.13□□□□□ -0.31
HCFC1R1-206ENST00000574151 ZNF652Q9Y2D9 606 aa13.13□□□□□ -0.31
HCFC1R1-206ENST00000574151 PRAMEF22A3QJZ6 481 aa13.12□□□□□ -0.31
HCFC1R1-206ENST00000574151 RALBP1Q15311 655 aa13.12□□□□□ -0.31
HCFC1R1-206ENST00000574151 CRY2Q49AN0 593 aa13.12□□□□□ -0.31
HCFC1R1-206ENST00000574151 NOM1Q5C9Z4 860 aaKnown RBP13.12□□□□□ -0.31
HCFC1R1-206ENST00000574151 OTOP1Q7RTM1 612 aa13.12□□□□□ -0.31
HCFC1R1-206ENST00000574151 CDCA5Q96FF9 252 aa13.12□□□□□ -0.31
HCFC1R1-206ENST00000574151 TM4SF4P48230 202 aa13.11□□□□□ -0.31
HCFC1R1-206ENST00000574151 HNRNPUQ00839 825 aaKnown RBP eCLIP13.11□□□□□ -0.31
HCFC1R1-206ENST00000574151 UNC80Q8N2C7 3258 aa13.1□□□□□ -0.31
HCFC1R1-206ENST00000574151 ABCC12Q96J65 1359 aa13.1□□□□□ -0.31
HCFC1R1-206ENST00000574151 SULF1Q8IWU6 871 aa13.1□□□□□ -0.31
HCFC1R1-206ENST00000574151 DPF3Q92784 378 aa13.1□□□□□ -0.31
HCFC1R1-206ENST00000574151 RBM17Q96I25 401 aaKnown RBP13.1□□□□□ -0.31
HCFC1R1-206ENST00000574151 LRCH3Q96II8 777 aa13.1□□□□□ -0.31
HCFC1R1-206ENST00000574151 TMX4Q9H1E5 349 aaPredicted RBP13.1□□□□□ -0.31
HCFC1R1-206ENST00000574151 VPS33BQ9H267 617 aa13.1□□□□□ -0.31
HCFC1R1-206ENST00000574151 ASTN2O75129 1339 aaPredicted RBP13.1□□□□□ -0.31
HCFC1R1-206ENST00000574151 YDJCA8MPS7 323 aa13.09□□□□□ -0.31
HCFC1R1-206ENST00000574151 UBE2Q2LH0YL09 131 aa13.09□□□□□ -0.31
HCFC1R1-206ENST00000574151 SOX1O00570 391 aaPredicted RBP13.09□□□□□ -0.31
HCFC1R1-206ENST00000574151 MYCP01106 439 aaPredicted RBP13.09□□□□□ -0.31
HCFC1R1-206ENST00000574151 ZNF790Q6PG37 636 aa13.09□□□□□ -0.31
HCFC1R1-206ENST00000574151 SUPT20HQ8NEM7 779 aa13.09□□□□□ -0.31
HCFC1R1-206ENST00000574151 PTPN22Q9Y2R2 807 aa13.09□□□□□ -0.31
HCFC1R1-206ENST00000574151 NUP98P52948 1817 aa13.09□□□□□ -0.31
HCFC1R1-206ENST00000574151 HOXA10P31260 410 aaPredicted RBP13.08□□□□□ -0.32
HCFC1R1-206ENST00000574151 HLFQ16534 295 aa13.08□□□□□ -0.32
HCFC1R1-206ENST00000574151 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
HCFC1R1-206ENST00000574151 GGA3Q9NZ52 723 aa13.08□□□□□ -0.32
HCFC1R1-206ENST00000574151 USP16Q9Y5T5 823 aa13.08□□□□□ -0.32
HCFC1R1-206ENST00000574151 SLC4A8Q2Y0W8 1093 aa13.07□□□□□ -0.32
HCFC1R1-206ENST00000574151 DPP8Q6V1X1 898 aaPredicted RBP13.07□□□□□ -0.32
HCFC1R1-206ENST00000574151 ARMC5Q96C12 935 aa13.07□□□□□ -0.32
HCFC1R1-206ENST00000574151 CFAP53Q96M91 514 aa13.07□□□□□ -0.32
HCFC1R1-206ENST00000574151 CRAMP1Q96RY5 1269 aa13.07□□□□□ -0.32
HCFC1R1-206ENST00000574151 TAF1P21675 1872 aa13.07□□□□□ -0.32
HCFC1R1-206ENST00000574151 WTIPA6NIX2 430 aaPredicted RBP13.06□□□□□ -0.32
HCFC1R1-206ENST00000574151 PSMD14O00487 310 aa13.06□□□□□ -0.32
HCFC1R1-206ENST00000574151 KIAA2012Q0VF49 1180 aa13.06□□□□□ -0.32
HCFC1R1-206ENST00000574151 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
HCFC1R1-206ENST00000574151 DPF2Q92785 391 aa13.06□□□□□ -0.32
HCFC1R1-206ENST00000574151 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
HCFC1R1-206ENST00000574151 MRS2Q9HD23 443 aa13.06□□□□□ -0.32
HCFC1R1-206ENST00000574151 SCAF8Q9UPN6 1271 aaKnown RBP13.06□□□□□ -0.32
HCFC1R1-206ENST00000574151 ATP6V0A2Q9Y487 856 aa13.06□□□□□ -0.32
HCFC1R1-206ENST00000574151 KCNQ3O43525 872 aa13.05□□□□□ -0.32
HCFC1R1-206ENST00000574151 HMOX1P09601 288 aa13.05□□□□□ -0.32
HCFC1R1-206ENST00000574151 SREBF2Q12772 1141 aa13.05□□□□□ -0.32
HCFC1R1-206ENST00000574151 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
HCFC1R1-206ENST00000574151 MPNDQ8N594 471 aa13.05□□□□□ -0.32
HCFC1R1-206ENST00000574151 CD99L2Q8TCZ2 262 aa13.05□□□□□ -0.32
HCFC1R1-206ENST00000574151 RTFDC1Q9BY42 306 aaPredicted RBP13.05□□□□□ -0.32
HCFC1R1-206ENST00000574151 NYXQ9GZU5 481 aa13.05□□□□□ -0.32
HCFC1R1-206ENST00000574151 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
HCFC1R1-206ENST00000574151 FKBP1BP68106 108 aa13.04□□□□□ -0.32
HCFC1R1-206ENST00000574151 TEFQ10587 303 aa13.04□□□□□ -0.32
HCFC1R1-206ENST00000574151 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
HCFC1R1-206ENST00000574151 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
HCFC1R1-206ENST00000574151 CFHR5Q9BXR6 569 aa13.04□□□□□ -0.32
HCFC1R1-206ENST00000574151 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
HCFC1R1-206ENST00000574151 ANGEL2Q5VTE6 544 aaKnown RBP13.03□□□□□ -0.32
HCFC1R1-206ENST00000574151 PRAMEF18Q5VWM3 479 aa13.03□□□□□ -0.32
HCFC1R1-206ENST00000574151 ZNF333Q96JL9 665 aa13.03□□□□□ -0.32
HCFC1R1-206ENST00000574151 PRO3102Q9H379 93 aa13.03□□□□□ -0.32
HCFC1R1-206ENST00000574151 PRDM6Q9NQX0 595 aa13.03□□□□□ -0.32
HCFC1R1-206ENST00000574151 KCNQ5Q9NR82 932 aa13.03□□□□□ -0.32
HCFC1R1-206ENST00000574151 IL13P35225 146 aa13.02□□□□□ -0.33
HCFC1R1-206ENST00000574151 ERO1AQ96HE7 468 aa13.02□□□□□ -0.33
HCFC1R1-206ENST00000574151 DBNDD1Q9H9R9 158 aa13.02□□□□□ -0.33
HCFC1R1-206ENST00000574151 EFCC1Q9HA90 598 aa13.02□□□□□ -0.33
HCFC1R1-206ENST00000574151 NUDCQ9Y266 331 aa13.02□□□□□ -0.33
HCFC1R1-206ENST00000574151 RIC1Q4ADV7 1423 aa13.02□□□□□ -0.33
HCFC1R1-206ENST00000574151 GPTP24298 496 aa13.01□□□□□ -0.33
HCFC1R1-206ENST00000574151 SCARF1Q14162 830 aa13.01□□□□□ -0.33
HCFC1R1-206ENST00000574151 Q7L0L9 218 aa13.01□□□□□ -0.33
HCFC1R1-206ENST00000574151 NGEFQ8N5V2 710 aa13.01□□□□□ -0.33
HCFC1R1-206ENST00000574151 DEFB123Q8N688 67 aa13.01□□□□□ -0.33
HCFC1R1-206ENST00000574151 TSHZ2Q9NRE2 1034 aa13.01□□□□□ -0.33
HCFC1R1-206ENST00000574151 MYBBP1AQ9BQG0 1328 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms