RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 NIP7Q9Y221 180 aaKnown RBP eCLIP8.03□□□□□ -1.12
CACNA1A-203ENST00000573891 ZNF541Q9H0D2 1346 aa8.03□□□□□ -1.12
CACNA1A-203ENST00000573891 SCN4AP35499 1836 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 ZNF316A6NFI3 1004 aaPredicted RBP8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 FZD9O00144 591 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 FOXN1O15353 648 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 HTATSF1O43719 755 aaKnown RBP8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 U2AF1L5P0DN76 240 aaPredicted RBP8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 U2AF1Q01081 240 aaKnown RBP eCLIP8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 CRY2Q49AN0 593 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 OLFM4Q6UX06 510 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 RTKN2Q8IZC4 609 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 ANP32EQ9BTT0 268 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 PRDM10Q9NQV6 1147 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 HACL1Q9UJ83 578 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 NUDCQ9Y266 331 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 ADAMTSL1Q8N6G6 1762 aa8.02□□□□□ -1.13
CACNA1A-203ENST00000573891 ABCC12Q96J65 1359 aa8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 TMEM88BA6NKF7 163 aa8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 PPP2R1AP30153 589 aa8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 ALDH1B1P30837 517 aa8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 EPHX2P34913 555 aa8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 IARSP41252 1262 aaKnown RBP8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 VEGFBP49765 207 aa8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 DCTN1Q14203 1278 aa8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 HLFQ16534 295 aa8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 EAPPQ56P03 285 aaPredicted RBP8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 PNMA8AQ86V59 439 aaPredicted RBP8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 PSMD1Q99460 953 aa8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 RNF123Q5XPI4 1314 aa8.01□□□□□ -1.13
CACNA1A-203ENST00000573891 CACNA1SQ13698 1873 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 IBTKQ9P2D0 1353 aaPredicted RBP8□□□□□ -1.13
CACNA1A-203ENST00000573891 RASSF10A6NK89 507 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 FAM177BA6PVY3 158 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 ERVV-1B6SEH8 477 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 CTCFP49711 727 aaPredicted RBP8□□□□□ -1.13
CACNA1A-203ENST00000573891 PDE4CQ08493 712 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 DSG2Q14126 1118 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 TAF7Q15545 349 aaPredicted RBP8□□□□□ -1.13
CACNA1A-203ENST00000573891 GPC2Q8N158 579 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 SYNE4Q8N205 404 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 PHF12Q96QT6 1004 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 WBP1LQ9NX94 342 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 TRPC6Q9Y210 931 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 RIC1Q4ADV7 1423 aa8□□□□□ -1.13
CACNA1A-203ENST00000573891 COL4A5P29400 1685 aa7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 GTF2E1P29083 439 aaPredicted RBP7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 HOXA10P31260 410 aaPredicted RBP7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 MAP1SQ66K74 1059 aaPredicted RBP7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 CC2D2BQ6DHV5 1058 aa7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 CNTROBQ8N137 903 aa7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 JDP2Q8WYK2 163 aa7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 AIDAQ96BJ3 306 aa7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 DDRGK1Q96HY6 314 aa7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 NYXQ9GZU5 481 aa7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 MIS18AQ9NYP9 233 aa7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 MAP3K15Q6ZN16 1313 aa7.99□□□□□ -1.13
CACNA1A-203ENST00000573891 LAMB4A4D0S4 1761 aa7.98□□□□□ -1.13
CACNA1A-203ENST00000573891 MAP2K5Q13163 448 aa7.98□□□□□ -1.13
CACNA1A-203ENST00000573891 AMHR2Q16671 573 aa7.98□□□□□ -1.13
CACNA1A-203ENST00000573891 GRIPAP1Q4V328 841 aa7.98□□□□□ -1.13
CACNA1A-203ENST00000573891 TAF7LQ5H9L4 462 aa7.98□□□□□ -1.13
CACNA1A-203ENST00000573891 NUTM1Q86Y26 1132 aa7.98□□□□□ -1.13
CACNA1A-203ENST00000573891 UBN2Q6ZU65 1347 aa7.98□□□□□ -1.13
CACNA1A-203ENST00000573891 IRF6O14896 467 aa7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 SCNN1DP51172 638 aa7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 LBX1P52954 281 aa7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 EIF6P56537 245 aaKnown RBP7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 EIF4A1P60842 406 aaKnown RBP7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 FOXK1P85037 733 aa7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 DEFB115Q30KQ5 88 aa7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 TTLL7Q6ZT98 887 aa7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 PNISRQ8TF01 805 aaKnown RBP7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 CCDC102AQ96A19 550 aa7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 CRAMP1Q96RY5 1269 aa7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 DDX21Q9NR30 783 aaKnown RBP eCLIP7.97□□□□□ -1.13
CACNA1A-203ENST00000573891 LTBP1Q14766 1721 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 NTSR2O95665 410 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 HSPA8P11142 646 aaKnown RBP7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 GPTP24298 496 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 LMOD1P29536 600 aaPredicted RBP7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 MAP2K1Q02750 393 aaPredicted RBP7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 FLIIQ13045 1269 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 SUSD4Q5VX71 490 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 KIF6Q6ZMV9 814 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 SLC51AQ86UW1 340 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 PARP9Q8IXQ6 854 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 ZNF34Q8IZ26 560 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 LARGE2Q8N3Y3 721 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 NGEFQ8N5V2 710 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 RPGRQ92834 1020 aaKnown RBP7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 PLEKHF1Q96S99 279 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 ARID3AQ99856 593 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 ABT1Q9ULW3 272 aaKnown RBP7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 RRP7AQ9Y3A4 280 aaKnown RBP7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 GJA3Q9Y6H8 435 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 KDM3BQ7LBC6 1761 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 ERBB4Q15303 1308 aa7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 WDR33Q9C0J8 1336 aaKnown RBP7.96□□□□□ -1.14
CACNA1A-203ENST00000573891 THSD7BQ9C0I4 1608 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms