RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SIPA1L3O60292 1781 aaPredicted RBP22.62■■□□□ 1.21
SCARF1-206ENST00000573852 SPATA32Q96LK8 384 aa22.62■■□□□ 1.21
SCARF1-206ENST00000573852 TSGA10IPQ3SY00 556 aa22.62■■□□□ 1.21
SCARF1-206ENST00000573852 LEO1Q8WVC0 666 aaPredicted RBP22.62■■□□□ 1.21
SCARF1-206ENST00000573852 SCAND2PQ9GZW5 306 aaPredicted RBP22.62■■□□□ 1.21
SCARF1-206ENST00000573852 TPM3P06753 285 aa22.61■■□□□ 1.21
SCARF1-206ENST00000573852 TNMDQ9H2S6 317 aa22.61■■□□□ 1.21
SCARF1-206ENST00000573852 FAM177BA6PVY3 158 aa22.61■■□□□ 1.21
SCARF1-206ENST00000573852 NEURL1BA8MQ27 555 aa22.61■■□□□ 1.21
SCARF1-206ENST00000573852 COL15A1P39059 1388 aa22.61■■□□□ 1.21
SCARF1-206ENST00000573852 HMG20BQ9P0W2 317 aa22.61■■□□□ 1.21
SCARF1-206ENST00000573852 AXIN2Q9Y2T1 843 aa22.61■■□□□ 1.21
SCARF1-206ENST00000573852 SLC39A6Q13433 755 aa22.6■■□□□ 1.21
SCARF1-206ENST00000573852 MYL6BP14649 208 aa22.6■■□□□ 1.21
SCARF1-206ENST00000573852 CBX8Q9HC52 389 aa22.6■■□□□ 1.21
SCARF1-206ENST00000573852 GOLGA6L4A6NEF3 574 aa22.59■■□□□ 1.21
SCARF1-206ENST00000573852 JAK2O60674 1132 aa22.59■■□□□ 1.21
SCARF1-206ENST00000573852 GCKRQ14397 625 aa22.59■■□□□ 1.21
SCARF1-206ENST00000573852 ANO6Q4KMQ2 910 aa22.59■■□□□ 1.21
SCARF1-206ENST00000573852 NPHP3Q7Z494 1330 aa22.59■■□□□ 1.21
SCARF1-206ENST00000573852 GOLGA6L6A8MZA4 724 aa22.59■■□□□ 1.21
SCARF1-206ENST00000573852 USPL1Q5W0Q7 1092 aa22.59■■□□□ 1.21
SCARF1-206ENST00000573852 MRC1P22897 1456 aa22.59■■□□□ 1.21
SCARF1-206ENST00000573852 CHGBP05060 677 aa22.58■■□□□ 1.21
SCARF1-206ENST00000573852 PTGS1P23219 599 aa22.58■■□□□ 1.21
SCARF1-206ENST00000573852 PGBD1Q96JS3 809 aa22.58■■□□□ 1.21
SCARF1-206ENST00000573852 NDUFB9Q9Y6M9 179 aa22.58■■□□□ 1.21
SCARF1-206ENST00000573852 XAGE3Q8WTP9 111 aa22.58■■□□□ 1.2
SCARF1-206ENST00000573852 DBNLQ9UJU6 430 aaKnown RBP22.58■■□□□ 1.2
SCARF1-206ENST00000573852 KIF3AQ9Y496 699 aa22.58■■□□□ 1.2
SCARF1-206ENST00000573852 RBM43Q6ZSC3 357 aaKnown RBP22.57■■□□□ 1.2
SCARF1-206ENST00000573852 MYD88Q99836 296 aa22.57■■□□□ 1.2
SCARF1-206ENST00000573852 CLSTN2Q9H4D0 955 aa22.57■■□□□ 1.2
SCARF1-206ENST00000573852 NR1I2O75469 434 aa22.57■■□□□ 1.2
SCARF1-206ENST00000573852 NEXNQ0ZGT2 675 aa22.57■■□□□ 1.2
SCARF1-206ENST00000573852 LMOD2Q6P5Q4 547 aa22.57■■□□□ 1.2
SCARF1-206ENST00000573852 DDX19AQ9NUU7 478 aaKnown RBP22.57■■□□□ 1.2
SCARF1-206ENST00000573852 ZNF790Q6PG37 636 aa22.56■■□□□ 1.2
SCARF1-206ENST00000573852 GTF3C6Q969F1 213 aa22.56■■□□□ 1.2
SCARF1-206ENST00000573852 ORAI2Q96SN7 254 aa22.56■■□□□ 1.2
SCARF1-206ENST00000573852 ATP5JP18859 108 aa22.56■■□□□ 1.2
SCARF1-206ENST00000573852 COPS6Q7L5N1 327 aa22.56■■□□□ 1.2
SCARF1-206ENST00000573852 CCDC94Q9BW85 323 aaPredicted RBP22.56■■□□□ 1.2
SCARF1-206ENST00000573852 CCDC129Q6ZRS4 1044 aa22.55■■□□□ 1.2
SCARF1-206ENST00000573852 NEK1Q96PY6 1258 aa22.55■■□□□ 1.2
SCARF1-206ENST00000573852 TFCP2Q12800 502 aa22.55■■□□□ 1.2
SCARF1-206ENST00000573852 BRF1Q92994 677 aa22.55■■□□□ 1.2
SCARF1-206ENST00000573852 DDX11Q96FC9 970 aa22.55■■□□□ 1.2
SCARF1-206ENST00000573852 SEC62Q99442 399 aaKnown RBP22.55■■□□□ 1.2
SCARF1-206ENST00000573852 METTL22Q9BUU2 404 aaPredicted RBP22.55■■□□□ 1.2
SCARF1-206ENST00000573852 C5P01031 1676 aa22.55■■□□□ 1.2
SCARF1-206ENST00000573852 RESTQ13127 1097 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 KRT32Q14532 448 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 COPRSQ9NQ92 184 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 RFX5P48382 616 aaPredicted RBP22.54■■□□□ 1.2
SCARF1-206ENST00000573852 TNNI3KQ59H18 835 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 Q6ZUG5 572 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 FPGT-TNNI3KV9GXZ4 949 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 SLIT3O75094 1523 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 ADAMTS7Q9UKP4 1686 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 PTPN12Q05209 780 aaKnown RBP22.54■■□□□ 1.2
SCARF1-206ENST00000573852 CCDC186Q7Z3E2 898 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 BCL2L12Q9HB09 334 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 NRBP1Q9UHY1 535 aa22.54■■□□□ 1.2
SCARF1-206ENST00000573852 ZNF609O15014 1411 aa22.53■■□□□ 1.2
SCARF1-206ENST00000573852 RIOK3O14730 519 aaKnown RBP22.53■■□□□ 1.2
SCARF1-206ENST00000573852 BICD2Q8TD16 824 aa22.53■■□□□ 1.2
SCARF1-206ENST00000573852 CAMTA1Q9Y6Y1 1673 aa22.53■■□□□ 1.2
SCARF1-206ENST00000573852 LRMPQ12912 555 aa22.52■■□□□ 1.2
SCARF1-206ENST00000573852 PLA2G4DQ86XP0 818 aa22.52■■□□□ 1.2
SCARF1-206ENST00000573852 CYP21A2P08686 494 aa22.52■■□□□ 1.2
SCARF1-206ENST00000573852 PIP4K2AP48426 406 aaPredicted RBP22.52■■□□□ 1.2
SCARF1-206ENST00000573852 ZNF75DP51815 510 aa22.52■■□□□ 1.2
SCARF1-206ENST00000573852 TDRD7Q8NHU6 1098 aaKnown RBP22.52■■□□□ 1.2
SCARF1-206ENST00000573852 DNAJC2Q99543 621 aaKnown RBP22.52■■□□□ 1.2
SCARF1-206ENST00000573852 NFATC2IPQ8NCF5 419 aa22.51■■□□□ 1.19
SCARF1-206ENST00000573852 LRRC2Q9BYS8 371 aa22.51■■□□□ 1.19
SCARF1-206ENST00000573852 TRIM5Q9C035 493 aa22.51■■□□□ 1.19
SCARF1-206ENST00000573852 DNAJC25Q9H1X3 360 aa22.51■■□□□ 1.19
SCARF1-206ENST00000573852 SLC52A2Q9HAB3 445 aa22.51■■□□□ 1.19
SCARF1-206ENST00000573852 HSP90B1P14625 803 aaKnown RBP22.51■■□□□ 1.19
SCARF1-206ENST00000573852 DRC7Q8IY82 874 aa22.51■■□□□ 1.19
SCARF1-206ENST00000573852 DBNDD2Q9BQY9 259 aa22.51■■□□□ 1.19
SCARF1-206ENST00000573852 ZNF165P49910 485 aa22.5■■□□□ 1.19
SCARF1-206ENST00000573852 ANKRD13DQ6ZTN6 518 aa22.5■■□□□ 1.19
SCARF1-206ENST00000573852 ANKLE2Q86XL3 938 aa22.5■■□□□ 1.19
SCARF1-206ENST00000573852 U3KPZ7 1027 aaPredicted RBP22.5■■□□□ 1.19
SCARF1-206ENST00000573852 RGPD5Q99666 1765 aa22.5■■□□□ 1.19
SCARF1-206ENST00000573852 H3BQV1 296 aa22.5■■□□□ 1.19
SCARF1-206ENST00000573852 CHAF1AQ13111 956 aaPredicted RBP22.5■■□□□ 1.19
SCARF1-206ENST00000573852 IFFO2Q5TF58 517 aa22.5■■□□□ 1.19
SCARF1-206ENST00000573852 KDM6AO15550 1401 aaPredicted RBP22.5■■□□□ 1.19
SCARF1-206ENST00000573852 SCRN1Q12765 414 aa22.49■■□□□ 1.19
SCARF1-206ENST00000573852 LRP10Q7Z4F1 713 aa22.49■■□□□ 1.19
SCARF1-206ENST00000573852 ZNF496Q96IT1 587 aaPredicted RBP22.49■■□□□ 1.19
SCARF1-206ENST00000573852 UBE3BQ7Z3V4 1068 aa22.49■■□□□ 1.19
SCARF1-206ENST00000573852 USP16Q9Y5T5 823 aa22.49■■□□□ 1.19
SCARF1-206ENST00000573852 MCMDC2Q4G0Z9 681 aa22.48■■□□□ 1.19
SCARF1-206ENST00000573852 STOX1Q6ZVD7 989 aa22.48■■□□□ 1.19
SCARF1-206ENST00000573852 DDX46Q7L014 1031 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms