RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 TSR2Q969E8 191 aaKnown RBP10.78□□□□□ -0.68
TVP23A-205ENST00000572428 IPO9Q96P70 1041 aaKnown RBP10.78□□□□□ -0.68
TVP23A-205ENST00000572428 ONECUT3O60422 494 aaPredicted RBP10.77□□□□□ -0.68
TVP23A-205ENST00000572428 KDM2BQ8NHM5 1336 aa10.77□□□□□ -0.69
TVP23A-205ENST00000572428 TRIM6-TRIM34B2RNG4 842 aa10.77□□□□□ -0.69
TVP23A-205ENST00000572428 EXOSC9Q06265 439 aaKnown RBP10.77□□□□□ -0.69
TVP23A-205ENST00000572428 ALDH1L2Q3SY69 923 aa10.77□□□□□ -0.69
TVP23A-205ENST00000572428 TRIM34Q9BYJ4 488 aa10.77□□□□□ -0.69
TVP23A-205ENST00000572428 KCPQ6ZWJ8 1503 aa10.77□□□□□ -0.69
TVP23A-205ENST00000572428 ERVV-2B6SEH9 535 aa10.76□□□□□ -0.69
TVP23A-205ENST00000572428 BCAR3O75815 825 aa10.76□□□□□ -0.69
TVP23A-205ENST00000572428 VAMP4O75379 141 aa10.76□□□□□ -0.69
TVP23A-205ENST00000572428 RARSP54136 660 aaKnown RBP10.76□□□□□ -0.69
TVP23A-205ENST00000572428 C8orf37Q96NL8 207 aa10.76□□□□□ -0.69
TVP23A-205ENST00000572428 SLC52A2Q9HAB3 445 aa10.76□□□□□ -0.69
TVP23A-205ENST00000572428 NAT2P11245 290 aa10.76□□□□□ -0.69
TVP23A-205ENST00000572428 NGLY1Q96IV0 654 aa10.76□□□□□ -0.69
TVP23A-205ENST00000572428 SPDYE4A6NLX3 237 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 SKILP12757 684 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 MPRIPQ6WCQ1 1025 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 TTC30AQ86WT1 665 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 MYCBPQ99417 103 aaPredicted RBP10.75□□□□□ -0.69
TVP23A-205ENST00000572428 IRF2BPLQ9H1B7 796 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
TVP23A-205ENST00000572428 ARIH1Q9Y4X5 557 aaPredicted RBP10.75□□□□□ -0.69
TVP23A-205ENST00000572428 RREB1Q92766 1687 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 SMAPO00193 183 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 CALRP27797 417 aaKnown RBP10.75□□□□□ -0.69
TVP23A-205ENST00000572428 NYAP1Q6ZVC0 841 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
TVP23A-205ENST00000572428 USP21Q9UK80 565 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 HOXB7P09629 217 aa10.75□□□□□ -0.69
TVP23A-205ENST00000572428 TJP1Q07157 1748 aa10.74□□□□□ -0.69
TVP23A-205ENST00000572428 STK10O94804 968 aaKnown RBP10.74□□□□□ -0.69
TVP23A-205ENST00000572428 GYS2P54840 703 aa10.74□□□□□ -0.69
TVP23A-205ENST00000572428 SPOCK3Q9BQ16 436 aa10.74□□□□□ -0.69
TVP23A-205ENST00000572428 AFF2P51816 1311 aa10.74□□□□□ -0.69
TVP23A-205ENST00000572428 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
TVP23A-205ENST00000572428 LY75O60449 1722 aa10.74□□□□□ -0.69
TVP23A-205ENST00000572428 MCCD1P59942 119 aaPredicted RBP10.73□□□□□ -0.69
TVP23A-205ENST00000572428 C8orf58Q8NAV2 365 aa10.73□□□□□ -0.69
TVP23A-205ENST00000572428 MRRFQ96E11 262 aaKnown RBP10.73□□□□□ -0.69
TVP23A-205ENST00000572428 KIF16BQ96L93 1317 aa10.73□□□□□ -0.69
TVP23A-205ENST00000572428 COL5A3P25940 1745 aaPredicted RBP10.73□□□□□ -0.69
TVP23A-205ENST00000572428 KCNJ4P48050 445 aa10.73□□□□□ -0.69
TVP23A-205ENST00000572428 EIF4A1P60842 406 aaKnown RBP10.73□□□□□ -0.69
TVP23A-205ENST00000572428 MORC4Q8TE76 937 aa10.73□□□□□ -0.69
TVP23A-205ENST00000572428 TSPYL4Q9UJ04 414 aa10.73□□□□□ -0.69
TVP23A-205ENST00000572428 SKIV2LQ15477 1246 aaKnown RBP10.73□□□□□ -0.69
TVP23A-205ENST00000572428 TWISTNBQ3B726 338 aaPredicted RBP10.73□□□□□ -0.69
TVP23A-205ENST00000572428 TSPYL6Q8N831 410 aa10.73□□□□□ -0.69
TVP23A-205ENST00000572428 CEP126Q9P2H0 1117 aa10.73□□□□□ -0.69
TVP23A-205ENST00000572428 CCDC189A1A4V9 331 aa10.72□□□□□ -0.69
TVP23A-205ENST00000572428 KCNA1Q09470 495 aa10.72□□□□□ -0.69
TVP23A-205ENST00000572428 TEFQ10587 303 aa10.72□□□□□ -0.69
TVP23A-205ENST00000572428 GJD4Q96KN9 370 aaPredicted RBP10.72□□□□□ -0.69
TVP23A-205ENST00000572428 RBM28Q9NW13 759 aaKnown RBP10.72□□□□□ -0.69
TVP23A-205ENST00000572428 TRPC5Q9UL62 973 aaPredicted RBP10.72□□□□□ -0.69
TVP23A-205ENST00000572428 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.72□□□□□ -0.69
TVP23A-205ENST00000572428 BTAF1O14981 1849 aa10.72□□□□□ -0.69
TVP23A-205ENST00000572428 BTBD11A6QL63 1104 aa10.72□□□□□ -0.69
TVP23A-205ENST00000572428 BIRC2Q13490 618 aa10.72□□□□□ -0.69
TVP23A-205ENST00000572428 RPAINQ86UA6 219 aa10.72□□□□□ -0.69
TVP23A-205ENST00000572428 UBA5Q9GZZ9 404 aa10.72□□□□□ -0.69
TVP23A-205ENST00000572428 LMNB1P20700 586 aa10.71□□□□□ -0.69
TVP23A-205ENST00000572428 SMC4Q9NTJ3 1288 aa10.71□□□□□ -0.69
TVP23A-205ENST00000572428 ANAPC4Q9UJX5 808 aa10.71□□□□□ -0.69
TVP23A-205ENST00000572428 FAM163BP0C2L3 166 aa10.71□□□□□ -0.69
TVP23A-205ENST00000572428 TNNT1P13805 278 aa10.71□□□□□ -0.69
TVP23A-205ENST00000572428 MEX3CQ5U5Q3 659 aaKnown RBP10.71□□□□□ -0.69
TVP23A-205ENST00000572428 C11orf96Q7Z7L8 435 aa10.71□□□□□ -0.69
TVP23A-205ENST00000572428 TPX2Q9ULW0 747 aaKnown RBP10.71□□□□□ -0.69
TVP23A-205ENST00000572428 GOLGA6L3A6NEY3 463 aa10.71□□□□□ -0.7
TVP23A-205ENST00000572428 ERICH4A6NGS2 130 aa10.71□□□□□ -0.7
TVP23A-205ENST00000572428 ZMYND10O75800 440 aa10.71□□□□□ -0.7
TVP23A-205ENST00000572428 DDB1Q16531 1140 aa10.71□□□□□ -0.7
TVP23A-205ENST00000572428 ARHGAP45Q92619 1136 aa10.71□□□□□ -0.7
TVP23A-205ENST00000572428 NCAPGQ9BPX3 1015 aa10.71□□□□□ -0.7
TVP23A-205ENST00000572428 PES1O00541 588 aaKnown RBP10.7□□□□□ -0.7
TVP23A-205ENST00000572428 MRPL50Q8N5N7 158 aaKnown RBP10.7□□□□□ -0.7
TVP23A-205ENST00000572428 SSH1Q8WYL5 1049 aa10.7□□□□□ -0.7
TVP23A-205ENST00000572428 RANBP17Q9H2T7 1088 aaKnown RBP10.7□□□□□ -0.7
TVP23A-205ENST00000572428 NUP188Q5SRE5 1749 aa10.7□□□□□ -0.7
TVP23A-205ENST00000572428 CFAP69A5D8W1 941 aa10.7□□□□□ -0.7
TVP23A-205ENST00000572428 FAM200BP0CF97 657 aa10.7□□□□□ -0.7
TVP23A-205ENST00000572428 PDE4AP27815 886 aa10.7□□□□□ -0.7
TVP23A-205ENST00000572428 NAP1L1P55209 391 aaKnown RBP10.7□□□□□ -0.7
TVP23A-205ENST00000572428 ZNF790Q6PG37 636 aa10.7□□□□□ -0.7
TVP23A-205ENST00000572428 NFATC2IPQ8NCF5 419 aa10.7□□□□□ -0.7
TVP23A-205ENST00000572428 BACH2Q9BYV9 841 aa10.7□□□□□ -0.7
TVP23A-205ENST00000572428 MIS18AQ9NYP9 233 aa10.7□□□□□ -0.7
TVP23A-205ENST00000572428 TAF1LQ8IZX4 1826 aa10.69□□□□□ -0.7
TVP23A-205ENST00000572428 WDR78Q5VTH9 848 aa10.69□□□□□ -0.7
TVP23A-205ENST00000572428 IVNS1ABPQ9Y6Y0 642 aa10.69□□□□□ -0.7
TVP23A-205ENST00000572428 RGPD3A6NKT7 1758 aaPredicted RBP10.69□□□□□ -0.7
TVP23A-205ENST00000572428 RGPD4Q7Z3J3 1758 aa10.69□□□□□ -0.7
TVP23A-205ENST00000572428 MARCH10Q8NA82 808 aaPredicted RBP10.69□□□□□ -0.7
TVP23A-205ENST00000572428 FAM210AQ96ND0 272 aa10.69□□□□□ -0.7
TVP23A-205ENST00000572428 PAIP2Q9BPZ3 127 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms