RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ADARB2Q9NS39 739 aaKnown RBP17.66■□□□□ 0.42
RPAIN-209ENST00000571558 SAPCD2Q86UD0 394 aa17.65■□□□□ 0.42
RPAIN-209ENST00000571558 NIM1KQ8IY84 436 aa17.65■□□□□ 0.42
RPAIN-209ENST00000571558 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
RPAIN-209ENST00000571558 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
RPAIN-209ENST00000571558 BRPF1P55201 1214 aaPredicted RBP17.64■□□□□ 0.42
RPAIN-209ENST00000571558 EIF4A1P60842 406 aaKnown RBP17.64■□□□□ 0.42
RPAIN-209ENST00000571558 KRT24Q2M2I5 525 aa17.64■□□□□ 0.42
RPAIN-209ENST00000571558 TSPYL6Q8N831 410 aa17.64■□□□□ 0.42
RPAIN-209ENST00000571558 GPRC5DQ9NZD1 345 aa17.64■□□□□ 0.42
RPAIN-209ENST00000571558 CT47B1P0C2W7 299 aaPredicted RBP17.64■□□□□ 0.41
RPAIN-209ENST00000571558 GRM1Q13255 1194 aa17.64■□□□□ 0.41
RPAIN-209ENST00000571558 RBM17Q96I25 401 aaKnown RBP17.64■□□□□ 0.41
RPAIN-209ENST00000571558 PGAP2Q9UHJ9 254 aa17.64■□□□□ 0.41
RPAIN-209ENST00000571558 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
RPAIN-209ENST00000571558 LTBP1Q14766 1721 aa17.63■□□□□ 0.41
RPAIN-209ENST00000571558 ZC3H15Q8WU90 426 aaKnown RBP17.63■□□□□ 0.41
RPAIN-209ENST00000571558 ABCC12Q96J65 1359 aa17.62■□□□□ 0.41
RPAIN-209ENST00000571558 TRPM7Q96QT4 1865 aa17.62■□□□□ 0.41
RPAIN-209ENST00000571558 COL4A5P29400 1685 aa17.62■□□□□ 0.41
RPAIN-209ENST00000571558 TRAF5O00463 557 aa17.62■□□□□ 0.41
RPAIN-209ENST00000571558 VAMP4O75379 141 aa17.62■□□□□ 0.41
RPAIN-209ENST00000571558 FMR1Q06787 632 aaKnown RBP eCLIP17.62■□□□□ 0.41
RPAIN-209ENST00000571558 NUTM1Q86Y26 1132 aa17.62■□□□□ 0.41
RPAIN-209ENST00000571558 SUPT20HQ8NEM7 779 aa17.62■□□□□ 0.41
RPAIN-209ENST00000571558 MAP3K15Q6ZN16 1313 aa17.62■□□□□ 0.41
RPAIN-209ENST00000571558 PPEF1O14829 653 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-209ENST00000571558 TWISTNBQ3B726 338 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-209ENST00000571558 MCOLN1Q9GZU1 580 aa17.61■□□□□ 0.41
RPAIN-209ENST00000571558 ZNRF3Q9ULT6 936 aa17.61■□□□□ 0.41
RPAIN-209ENST00000571558 PPIP5K2O43314 1243 aa17.6■□□□□ 0.41
RPAIN-209ENST00000571558 AOC2O75106 756 aa17.6■□□□□ 0.41
RPAIN-209ENST00000571558 CELF2O95319 508 aaKnown RBP17.6■□□□□ 0.41
RPAIN-209ENST00000571558 KIF6Q6ZMV9 814 aa17.6■□□□□ 0.41
RPAIN-209ENST00000571558 RCAN3Q9UKA8 241 aa17.6■□□□□ 0.41
RPAIN-209ENST00000571558 ELL2O00472 640 aaPredicted RBP17.59■□□□□ 0.41
RPAIN-209ENST00000571558 NOGQ13253 232 aa17.59■□□□□ 0.41
RPAIN-209ENST00000571558 ZNF428Q96B54 188 aa17.59■□□□□ 0.41
RPAIN-209ENST00000571558 RTFDC1Q9BY42 306 aaPredicted RBP17.59■□□□□ 0.41
RPAIN-209ENST00000571558 ATP6V0A2Q9Y487 856 aa17.59■□□□□ 0.41
RPAIN-209ENST00000571558 HOXB7P09629 217 aa17.58■□□□□ 0.41
RPAIN-209ENST00000571558 RARSP54136 660 aaKnown RBP17.58■□□□□ 0.41
RPAIN-209ENST00000571558 CXCL9Q07325 125 aa17.58■□□□□ 0.41
RPAIN-209ENST00000571558 CDC37L1Q7L3B6 337 aa17.58■□□□□ 0.41
RPAIN-209ENST00000571558 PPP1R42Q7Z4L9 355 aa17.58■□□□□ 0.41
RPAIN-209ENST00000571558 NLRP3Q96P20 1036 aa17.58■□□□□ 0.41
RPAIN-209ENST00000571558 PARP10Q53GL7 1025 aa17.57■□□□□ 0.4
RPAIN-209ENST00000571558 ZNF34Q8IZ26 560 aa17.57■□□□□ 0.4
RPAIN-209ENST00000571558 TSKSQ9UJT2 592 aa17.57■□□□□ 0.4
RPAIN-209ENST00000571558 UBN2Q6ZU65 1347 aa17.56■□□□□ 0.4
RPAIN-209ENST00000571558 TNIP1Q15025 636 aa17.56■□□□□ 0.4
RPAIN-209ENST00000571558 AOC3Q16853 763 aa17.56■□□□□ 0.4
RPAIN-209ENST00000571558 SUSD4Q5VX71 490 aa17.56■□□□□ 0.4
RPAIN-209ENST00000571558 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
RPAIN-209ENST00000571558 BBOX1O75936 387 aa17.55■□□□□ 0.4
RPAIN-209ENST00000571558 NTSR2O95665 410 aa17.55■□□□□ 0.4
RPAIN-209ENST00000571558 DGKZQ13574 1117 aa17.55■□□□□ 0.4
RPAIN-209ENST00000571558 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
RPAIN-209ENST00000571558 CIAPIN1Q6FI81 312 aa17.55■□□□□ 0.4
RPAIN-209ENST00000571558 GIGYF2Q6Y7W6 1299 aaKnown RBP17.55■□□□□ 0.4
RPAIN-209ENST00000571558 GLIS2Q9BZE0 524 aaPredicted RBP17.55■□□□□ 0.4
RPAIN-209ENST00000571558 LAMB4A4D0S4 1761 aa17.55■□□□□ 0.4
RPAIN-209ENST00000571558 GPTP24298 496 aa17.55■□□□□ 0.4
RPAIN-209ENST00000571558 GMPSP49915 693 aaPredicted RBP17.55■□□□□ 0.4
RPAIN-209ENST00000571558 ALDH1L2Q3SY69 923 aa17.55■□□□□ 0.4
RPAIN-209ENST00000571558 SSH1Q8WYL5 1049 aa17.55■□□□□ 0.4
RPAIN-209ENST00000571558 TNRC18O15417 2968 aaPredicted RBP17.54■□□□□ 0.4
RPAIN-209ENST00000571558 NUP98P52948 1817 aa17.54■□□□□ 0.4
RPAIN-209ENST00000571558 BCAR3O75815 825 aa17.54■□□□□ 0.4
RPAIN-209ENST00000571558 KIAA2012Q0VF49 1180 aa17.54■□□□□ 0.4
RPAIN-209ENST00000571558 TTLL7Q6ZT98 887 aa17.54■□□□□ 0.4
RPAIN-209ENST00000571558 SP8Q8IXZ3 490 aa17.54■□□□□ 0.4
RPAIN-209ENST00000571558 TCERG1O14776 1098 aaKnown RBP17.53■□□□□ 0.4
RPAIN-209ENST00000571558 DPP8Q6V1X1 898 aaPredicted RBP17.53■□□□□ 0.4
RPAIN-209ENST00000571558 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
RPAIN-209ENST00000571558 ZBTB3Q9H5J0 574 aa17.53■□□□□ 0.4
RPAIN-209ENST00000571558 SAGE1Q9NXZ1 904 aa17.53■□□□□ 0.4
RPAIN-209ENST00000571558 H7C1D1 291 aa17.52■□□□□ 0.4
RPAIN-209ENST00000571558 MPNDQ8N594 471 aa17.52■□□□□ 0.4
RPAIN-209ENST00000571558 MYL6BP14649 208 aa17.51■□□□□ 0.39
RPAIN-209ENST00000571558 HIRAP54198 1017 aaPredicted RBP17.51■□□□□ 0.39
RPAIN-209ENST00000571558 HDGFL1Q5TGJ6 251 aa17.51■□□□□ 0.39
RPAIN-209ENST00000571558 TMC4Q7Z404 712 aa17.51■□□□□ 0.39
RPAIN-209ENST00000571558 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
RPAIN-209ENST00000571558 DPF2Q92785 391 aa17.51■□□□□ 0.39
RPAIN-209ENST00000571558 CCDC102AQ96A19 550 aa17.51■□□□□ 0.39
RPAIN-209ENST00000571558 UTP14AQ9BVJ6 771 aaKnown RBP17.51■□□□□ 0.39
RPAIN-209ENST00000571558 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
RPAIN-209ENST00000571558 HUNKP57058 714 aa17.5■□□□□ 0.39
RPAIN-209ENST00000571558 CCDC30Q5VVM6 783 aa17.5■□□□□ 0.39
RPAIN-209ENST00000571558 ZNF408Q9H9D4 720 aa17.5■□□□□ 0.39
RPAIN-209ENST00000571558 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
RPAIN-209ENST00000571558 CNOT7Q9UIV1 285 aaKnown RBP17.5■□□□□ 0.39
RPAIN-209ENST00000571558 ABCC4O15439 1325 aa17.5■□□□□ 0.39
RPAIN-209ENST00000571558 PDE4DIPQ5VU43 2346 aa17.49■□□□□ 0.39
RPAIN-209ENST00000571558 C3orf67Q6ZVT6 689 aa17.49■□□□□ 0.39
RPAIN-209ENST00000571558 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
RPAIN-209ENST00000571558 CASP8AP2Q9UKL3 1982 aa17.49■□□□□ 0.39
RPAIN-209ENST00000571558 RAD17O75943 681 aa17.48■□□□□ 0.39
RPAIN-209ENST00000571558 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms