RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 DDX54Q8TDD1 881 aaKnown RBP18.11■□□□□ 0.49
SMG6-207ENST00000570756 NPHP4O75161 1426 aaPredicted RBP18.11■□□□□ 0.49
SMG6-207ENST00000570756 SLC27A2O14975 620 aa18.1■□□□□ 0.49
SMG6-207ENST00000570756 IFIT2P09913 472 aaKnown RBP18.1■□□□□ 0.49
SMG6-207ENST00000570756 CCZ1BP86790 482 aa18.1■□□□□ 0.49
SMG6-207ENST00000570756 CCZ1P86791 482 aaPredicted RBP18.1■□□□□ 0.49
SMG6-207ENST00000570756 ERC1Q8IUD2 1116 aa18.1■□□□□ 0.49
SMG6-207ENST00000570756 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
SMG6-207ENST00000570756 SBNO1A3KN83 1393 aa18.1■□□□□ 0.49
SMG6-207ENST00000570756 IGSF1Q8N6C5 1336 aa18.1■□□□□ 0.49
SMG6-207ENST00000570756 RPS6KB1P23443 525 aa18.1■□□□□ 0.49
SMG6-207ENST00000570756 IRX5P78411 483 aaPredicted RBP18.1■□□□□ 0.49
SMG6-207ENST00000570756 ZSCAN16Q9H4T2 348 aaPredicted RBP18.1■□□□□ 0.49
SMG6-207ENST00000570756 STRCQ7RTU9 1775 aa18.09■□□□□ 0.49
SMG6-207ENST00000570756 ACEP12821 1306 aa18.09■□□□□ 0.49
SMG6-207ENST00000570756 NBPF7P0C2Y1 421 aaPredicted RBP18.09■□□□□ 0.49
SMG6-207ENST00000570756 NOL10Q9BSC4 688 aaKnown RBP18.09■□□□□ 0.49
SMG6-207ENST00000570756 USP6P35125 1406 aa18.09■□□□□ 0.49
SMG6-207ENST00000570756 SLC20A2Q08357 652 aa18.09■□□□□ 0.49
SMG6-207ENST00000570756 ARID5BQ14865 1188 aa18.09■□□□□ 0.49
SMG6-207ENST00000570756 TAF7Q15545 349 aaPredicted RBP18.09■□□□□ 0.49
SMG6-207ENST00000570756 FILIP1Q7Z7B0 1213 aa18.09■□□□□ 0.49
SMG6-207ENST00000570756 TRMT1Q9NXH9 659 aaKnown RBP18.09■□□□□ 0.49
SMG6-207ENST00000570756 TUBB4AP04350 444 aa18.08■□□□□ 0.49
SMG6-207ENST00000570756 C11orf57Q6ZUT1 292 aaPredicted RBP18.08■□□□□ 0.49
SMG6-207ENST00000570756 CHMP4AQ9BY43 222 aa18.08■□□□□ 0.49
SMG6-207ENST00000570756 BCL11BQ9C0K0 894 aaPredicted RBP18.08■□□□□ 0.49
SMG6-207ENST00000570756 PHAXQ9H814 394 aaKnown RBP18.08■□□□□ 0.49
SMG6-207ENST00000570756 SNRKQ9NRH2 765 aa18.08■□□□□ 0.49
SMG6-207ENST00000570756 HMG20BQ9P0W2 317 aa18.08■□□□□ 0.49
SMG6-207ENST00000570756 USP16Q9Y5T5 823 aa18.08■□□□□ 0.49
SMG6-207ENST00000570756 ERICH4A6NGS2 130 aa18.08■□□□□ 0.48
SMG6-207ENST00000570756 SOX12O15370 315 aa18.08■□□□□ 0.48
SMG6-207ENST00000570756 DNAJC2Q99543 621 aaKnown RBP18.08■□□□□ 0.48
SMG6-207ENST00000570756 ANO10Q9NW15 660 aa18.08■□□□□ 0.48
SMG6-207ENST00000570756 H3BQV1 296 aa18.07■□□□□ 0.48
SMG6-207ENST00000570756 H2AFXP16104 143 aaPredicted RBP18.07■□□□□ 0.48
SMG6-207ENST00000570756 RESTQ13127 1097 aa18.07■□□□□ 0.48
SMG6-207ENST00000570756 SNW1Q13573 536 aaKnown RBP18.07■□□□□ 0.48
SMG6-207ENST00000570756 DHX8Q14562 1220 aaKnown RBP18.07■□□□□ 0.48
SMG6-207ENST00000570756 IFFO2Q5TF58 517 aa18.07■□□□□ 0.48
SMG6-207ENST00000570756 EYA1Q99502 592 aa18.07■□□□□ 0.48
SMG6-207ENST00000570756 L2HGDHQ9H9P8 463 aa18.07■□□□□ 0.48
SMG6-207ENST00000570756 MTX1Q13505 466 aa18.07■□□□□ 0.48
SMG6-207ENST00000570756 TOB2Q14106 344 aaPredicted RBP18.07■□□□□ 0.48
SMG6-207ENST00000570756 NAT10Q9H0A0 1025 aaKnown RBP18.07■□□□□ 0.48
SMG6-207ENST00000570756 IMPACTQ9P2X3 320 aa18.07■□□□□ 0.48
SMG6-207ENST00000570756 AMOTL2Q9Y2J4 779 aa18.07■□□□□ 0.48
SMG6-207ENST00000570756 ERBB3P21860 1342 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 PLEKHG3A1L390 1219 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 NMIQ13287 307 aaPredicted RBP18.06■□□□□ 0.48
SMG6-207ENST00000570756 CEP57L1Q8IYX8 460 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 DNAAF4Q8WXU2 420 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 TSPYL1Q9H0U9 437 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 ZNF446Q9NWS9 450 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 TBX22Q9Y458 520 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 ZBTB22O15209 634 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 NRDCO43847 1150 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 BEND3Q5T5X7 828 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 CCDC73Q6ZRK6 1079 aa18.06■□□□□ 0.48
SMG6-207ENST00000570756 KCNA6P17658 529 aa18.05■□□□□ 0.48
SMG6-207ENST00000570756 CYP2C19P33261 490 aa18.05■□□□□ 0.48
SMG6-207ENST00000570756 AEBP2Q6ZN18 517 aaPredicted RBP18.05■□□□□ 0.48
SMG6-207ENST00000570756 FAM227BQ96M60 508 aa18.05■□□□□ 0.48
SMG6-207ENST00000570756 OSBPL5Q9H0X9 879 aaPredicted RBP18.05■□□□□ 0.48
SMG6-207ENST00000570756 HDAC5Q9UQL6 1122 aa18.05■□□□□ 0.48
SMG6-207ENST00000570756 TOPAZ1Q8N9V7 1692 aa18.05■□□□□ 0.48
SMG6-207ENST00000570756 ROBO2Q9HCK4 1378 aa18.05■□□□□ 0.48
SMG6-207ENST00000570756 KINO60870 393 aaKnown RBP18.04■□□□□ 0.48
SMG6-207ENST00000570756 AMPHP49418 695 aa18.04■□□□□ 0.48
SMG6-207ENST00000570756 STK3Q13188 491 aa18.04■□□□□ 0.48
SMG6-207ENST00000570756 KRT32Q14532 448 aa18.04■□□□□ 0.48
SMG6-207ENST00000570756 TSGA10IPQ3SY00 556 aa18.04■□□□□ 0.48
SMG6-207ENST00000570756 BRF1Q92994 677 aa18.04■□□□□ 0.48
SMG6-207ENST00000570756 GTF3C6Q969F1 213 aa18.04■□□□□ 0.48
SMG6-207ENST00000570756 DHX40Q8IX18 779 aaKnown RBP18.04■□□□□ 0.48
SMG6-207ENST00000570756 CCDC150Q8NCX0 1101 aa18.04■□□□□ 0.48
SMG6-207ENST00000570756 TCEANC2Q96MN5 208 aa18.04■□□□□ 0.48
SMG6-207ENST00000570756 ARGLU1Q9NWB6 273 aaPredicted RBP18.04■□□□□ 0.48
SMG6-207ENST00000570756 TULP2O00295 520 aa18.03■□□□□ 0.48
SMG6-207ENST00000570756 KCNJ6P48051 423 aa18.03■□□□□ 0.48
SMG6-207ENST00000570756 AACSQ86V21 672 aa18.03■□□□□ 0.48
SMG6-207ENST00000570756 CCAR1Q8IX12 1150 aaKnown RBP18.03■□□□□ 0.48
SMG6-207ENST00000570756 ADCY9O60503 1353 aa18.03■□□□□ 0.48
SMG6-207ENST00000570756 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
SMG6-207ENST00000570756 TEX35Q5T0J7 233 aa18.03■□□□□ 0.48
SMG6-207ENST00000570756 IL17REQ8NFR9 667 aa18.03■□□□□ 0.48
SMG6-207ENST00000570756 ERCC6LQ2NKX8 1250 aa18.02■□□□□ 0.48
SMG6-207ENST00000570756 ST7Q9NRC1 585 aa18.02■□□□□ 0.48
SMG6-207ENST00000570756 FHOD1Q9Y613 1164 aa18.02■□□□□ 0.48
SMG6-207ENST00000570756 PI4KAP2A4QPH2 592 aa18.02■□□□□ 0.47
SMG6-207ENST00000570756 PI4KAP1Q8N8J0 262 aa18.02■□□□□ 0.47
SMG6-207ENST00000570756 NPHP1O15259 732 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 JAK2O60674 1132 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 HOXB7P09629 217 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 CLCN6P51797 869 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 ATL3Q6DD88 541 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 PPP1R13BQ96KQ4 1090 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 RCOR1Q9UKL0 485 aa18.01■□□□□ 0.47
SMG6-207ENST00000570756 MED23Q9ULK4 1368 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms