RNA–Protein interactions for RNA: ENST00000570626.1

RBFOX1-221, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-221ENST00000570626 DCPSQ96C86 337 aaKnown RBP13.21□□□□□ -0.29
RBFOX1-221ENST00000570626 CDCA5Q96FF9 252 aa13.21□□□□□ -0.29
RBFOX1-221ENST00000570626 VPS33BQ9H267 617 aa13.21□□□□□ -0.29
RBFOX1-221ENST00000570626 SIPA1L3O60292 1781 aaPredicted RBP13.2□□□□□ -0.3
RBFOX1-221ENST00000570626 KIF7Q2M1P5 1343 aa13.2□□□□□ -0.3
RBFOX1-221ENST00000570626 TM4SF4P48230 202 aa13.2□□□□□ -0.3
RBFOX1-221ENST00000570626 NUTM1Q86Y26 1132 aa13.2□□□□□ -0.3
RBFOX1-221ENST00000570626 ARMC5Q96C12 935 aa13.2□□□□□ -0.3
RBFOX1-221ENST00000570626 CFHR5Q9BXR6 569 aa13.2□□□□□ -0.3
RBFOX1-221ENST00000570626 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
RBFOX1-221ENST00000570626 SPTBN5Q9NRC6 3674 aaKnown RBP13.19□□□□□ -0.3
RBFOX1-221ENST00000570626 YDJCA8MPS7 323 aa13.19□□□□□ -0.3
RBFOX1-221ENST00000570626 GTF2E1P29083 439 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-221ENST00000570626 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
RBFOX1-221ENST00000570626 PRO3102Q9H379 93 aa13.19□□□□□ -0.3
RBFOX1-221ENST00000570626 PRAMEF22A3QJZ6 481 aa13.18□□□□□ -0.3
RBFOX1-221ENST00000570626 SOX1O00570 391 aaPredicted RBP13.18□□□□□ -0.3
RBFOX1-221ENST00000570626 CRAMP1Q96RY5 1269 aa13.18□□□□□ -0.3
RBFOX1-221ENST00000570626 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
RBFOX1-221ENST00000570626 GGA3Q9NZ52 723 aa13.18□□□□□ -0.3
RBFOX1-221ENST00000570626 ASTN2O75129 1339 aaPredicted RBP13.17□□□□□ -0.3
RBFOX1-221ENST00000570626 VCANP13611 3396 aa13.17□□□□□ -0.3
RBFOX1-221ENST00000570626 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
RBFOX1-221ENST00000570626 MOB2Q70IA6 237 aa13.17□□□□□ -0.3
RBFOX1-221ENST00000570626 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
RBFOX1-221ENST00000570626 SUPT20HQ8NEM7 779 aa13.17□□□□□ -0.3
RBFOX1-221ENST00000570626 DPF2Q92785 391 aa13.17□□□□□ -0.3
RBFOX1-221ENST00000570626 PTPN22Q9Y2R2 807 aa13.17□□□□□ -0.3
RBFOX1-221ENST00000570626 ZNF609O15014 1411 aa13.16□□□□□ -0.3
RBFOX1-221ENST00000570626 FKBP1BP68106 108 aa13.16□□□□□ -0.3
RBFOX1-221ENST00000570626 HLFQ16534 295 aa13.16□□□□□ -0.3
RBFOX1-221ENST00000570626 RBM26Q5T8P6 1007 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-221ENST00000570626 RBM17Q96I25 401 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-221ENST00000570626 LRCH3Q96II8 777 aa13.16□□□□□ -0.3
RBFOX1-221ENST00000570626 ATP6V0A2Q9Y487 856 aa13.16□□□□□ -0.3
RBFOX1-221ENST00000570626 RGL2O15211 777 aa13.15□□□□□ -0.3
RBFOX1-221ENST00000570626 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-221ENST00000570626 MTHFSDQ2M296 383 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-221ENST00000570626 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
RBFOX1-221ENST00000570626 FMNL2Q96PY5 1086 aa13.15□□□□□ -0.3
RBFOX1-221ENST00000570626 TMEM106CQ9BVX2 250 aa13.15□□□□□ -0.3
RBFOX1-221ENST00000570626 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
RBFOX1-221ENST00000570626 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
RBFOX1-221ENST00000570626 UBE2Q2LH0YL09 131 aa13.14□□□□□ -0.31
RBFOX1-221ENST00000570626 PSMD14O00487 310 aa13.14□□□□□ -0.31
RBFOX1-221ENST00000570626 IL13P35225 146 aa13.14□□□□□ -0.31
RBFOX1-221ENST00000570626 KIF4BQ2VIQ3 1234 aa13.14□□□□□ -0.31
RBFOX1-221ENST00000570626 ZNF333Q96JL9 665 aa13.14□□□□□ -0.31
RBFOX1-221ENST00000570626 NYXQ9GZU5 481 aa13.14□□□□□ -0.31
RBFOX1-221ENST00000570626 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
RBFOX1-221ENST00000570626 SREBF2Q12772 1141 aa13.13□□□□□ -0.31
RBFOX1-221ENST00000570626 CDCA8Q53HL2 280 aa13.13□□□□□ -0.31
RBFOX1-221ENST00000570626 DPP8Q6V1X1 898 aaPredicted RBP13.13□□□□□ -0.31
RBFOX1-221ENST00000570626 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
RBFOX1-221ENST00000570626 KCNQ3O43525 872 aa13.12□□□□□ -0.31
RBFOX1-221ENST00000570626 CD99L2Q8TCZ2 262 aa13.12□□□□□ -0.31
RBFOX1-221ENST00000570626 TMX4Q9H1E5 349 aaPredicted RBP13.12□□□□□ -0.31
RBFOX1-221ENST00000570626 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
RBFOX1-221ENST00000570626 CAP1Q01518 475 aa13.11□□□□□ -0.31
RBFOX1-221ENST00000570626 TEFQ10587 303 aa13.11□□□□□ -0.31
RBFOX1-221ENST00000570626 NBPF10Q6P3W6 841 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-221ENST00000570626 MPNDQ8N594 471 aa13.11□□□□□ -0.31
RBFOX1-221ENST00000570626 PRDM6Q9NQX0 595 aa13.11□□□□□ -0.31
RBFOX1-221ENST00000570626 NUP98P52948 1817 aa13.11□□□□□ -0.31
RBFOX1-221ENST00000570626 ABCC4O15439 1325 aa13.11□□□□□ -0.31
RBFOX1-221ENST00000570626 IBTKQ9P2D0 1353 aaPredicted RBP13.1□□□□□ -0.31
RBFOX1-221ENST00000570626 LAMB4A4D0S4 1761 aa13.1□□□□□ -0.31
RBFOX1-221ENST00000570626 HMOX1P09601 288 aa13.1□□□□□ -0.31
RBFOX1-221ENST00000570626 RPS12P25398 132 aaKnown RBP13.1□□□□□ -0.31
RBFOX1-221ENST00000570626 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
RBFOX1-221ENST00000570626 UBN2Q6ZU65 1347 aa13.1□□□□□ -0.31
RBFOX1-221ENST00000570626 SLC4A8Q2Y0W8 1093 aa13.09□□□□□ -0.31
RBFOX1-221ENST00000570626 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
RBFOX1-221ENST00000570626 DPF3Q92784 378 aa13.09□□□□□ -0.31
RBFOX1-221ENST00000570626 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
RBFOX1-221ENST00000570626 STXBP5LQ9Y2K9 1186 aa13.09□□□□□ -0.31
RBFOX1-221ENST00000570626 RTL9Q8NET4 1388 aa13.08□□□□□ -0.31
RBFOX1-221ENST00000570626 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-221ENST00000570626 ALDH1A1P00352 501 aa13.08□□□□□ -0.32
RBFOX1-221ENST00000570626 DBNDD1Q9H9R9 158 aa13.08□□□□□ -0.32
RBFOX1-221ENST00000570626 EFCC1Q9HA90 598 aa13.08□□□□□ -0.32
RBFOX1-221ENST00000570626 KCNQ5Q9NR82 932 aa13.08□□□□□ -0.32
RBFOX1-221ENST00000570626 SCAF8Q9UPN6 1271 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-221ENST00000570626 LAMB2P55268 1798 aa13.07□□□□□ -0.32
RBFOX1-221ENST00000570626 A0A1W2PPC1 479 aa13.07□□□□□ -0.32
RBFOX1-221ENST00000570626 WTIPA6NIX2 430 aaPredicted RBP13.07□□□□□ -0.32
RBFOX1-221ENST00000570626 MYCP01106 439 aaPredicted RBP13.07□□□□□ -0.32
RBFOX1-221ENST00000570626 PRAMEF18Q5VWM3 479 aa13.07□□□□□ -0.32
RBFOX1-221ENST00000570626 Q7L0L9 218 aa13.07□□□□□ -0.32
RBFOX1-221ENST00000570626 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.07□□□□□ -0.32
RBFOX1-221ENST00000570626 SP8Q8IXZ3 490 aa13.07□□□□□ -0.32
RBFOX1-221ENST00000570626 DEFB123Q8N688 67 aa13.07□□□□□ -0.32
RBFOX1-221ENST00000570626 LRRC37AA6NMS7 1700 aa13.07□□□□□ -0.32
RBFOX1-221ENST00000570626 NTSR2O95665 410 aa13.06□□□□□ -0.32
RBFOX1-221ENST00000570626 GPTP24298 496 aa13.06□□□□□ -0.32
RBFOX1-221ENST00000570626 SCARF1Q14162 830 aa13.06□□□□□ -0.32
RBFOX1-221ENST00000570626 SLC9C1Q4G0N8 1177 aa13.06□□□□□ -0.32
RBFOX1-221ENST00000570626 SUSD4Q5VX71 490 aa13.06□□□□□ -0.32
RBFOX1-221ENST00000570626 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
RBFOX1-221ENST00000570626 SCN9AQ15858 1988 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms