RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 DBF4Q9UBU7 674 aaPredicted RBP12.68□□□□□ -0.38
GDE1-205ENST00000569899 F6X3S4 739 aa12.67□□□□□ -0.38
GDE1-205ENST00000569899 PIP4K2AP48426 406 aaPredicted RBP12.67□□□□□ -0.38
GDE1-205ENST00000569899 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
GDE1-205ENST00000569899 CCDC136Q96JN2 1154 aa12.66□□□□□ -0.38
GDE1-205ENST00000569899 SLC4A9Q96Q91 983 aa12.66□□□□□ -0.38
GDE1-205ENST00000569899 DDX21Q9NR30 783 aaKnown RBP eCLIP12.66□□□□□ -0.38
GDE1-205ENST00000569899 ADGRG1Q9Y653 693 aa12.66□□□□□ -0.38
GDE1-205ENST00000569899 TAF1LQ8IZX4 1826 aa12.66□□□□□ -0.38
GDE1-205ENST00000569899 PALLDQ8WX93 1383 aa12.66□□□□□ -0.38
GDE1-205ENST00000569899 MYH14Q7Z406 1995 aaKnown RBP12.66□□□□□ -0.38
GDE1-205ENST00000569899 TRIM66O15016 1216 aa12.66□□□□□ -0.38
GDE1-205ENST00000569899 RBM6P78332 1123 aaKnown RBP12.66□□□□□ -0.38
GDE1-205ENST00000569899 DNAJC10Q8IXB1 793 aa12.66□□□□□ -0.38
GDE1-205ENST00000569899 DDX19BQ9UMR2 479 aa12.66□□□□□ -0.38
GDE1-205ENST00000569899 ADCY9O60503 1353 aa12.65□□□□□ -0.38
GDE1-205ENST00000569899 C3orf80F5H4A9 247 aa12.65□□□□□ -0.38
GDE1-205ENST00000569899 MYL6BP14649 208 aa12.65□□□□□ -0.38
GDE1-205ENST00000569899 PTF1AQ7RTS3 328 aa12.65□□□□□ -0.38
GDE1-205ENST00000569899 SLC4A5Q9BY07 1137 aa12.65□□□□□ -0.38
GDE1-205ENST00000569899 INTS3Q68E01 1043 aaKnown RBP12.64□□□□□ -0.39
GDE1-205ENST00000569899 POTEGQ6S5H5 508 aa12.64□□□□□ -0.39
GDE1-205ENST00000569899 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
GDE1-205ENST00000569899 LRP10Q7Z4F1 713 aa12.64□□□□□ -0.39
GDE1-205ENST00000569899 HYPKQ9NX55 129 aa12.64□□□□□ -0.39
GDE1-205ENST00000569899 RGS17Q9UGC6 210 aaPredicted RBP12.64□□□□□ -0.39
GDE1-205ENST00000569899 ERBB4Q15303 1308 aa12.64□□□□□ -0.39
GDE1-205ENST00000569899 ANKRD36CQ5JPF3 1778 aa12.64□□□□□ -0.39
GDE1-205ENST00000569899 NBPF26B4DH59 902 aa12.63□□□□□ -0.39
GDE1-205ENST00000569899 A1BGP04217 495 aa12.63□□□□□ -0.39
GDE1-205ENST00000569899 NBPF14Q5TI25 921 aa12.63□□□□□ -0.39
GDE1-205ENST00000569899 NBPF10Q6P3W6 841 aaKnown RBP12.63□□□□□ -0.39
GDE1-205ENST00000569899 NBPF15Q8N660 670 aa12.63□□□□□ -0.39
GDE1-205ENST00000569899 TNS1Q9HBL0 1735 aaKnown RBP12.63□□□□□ -0.39
GDE1-205ENST00000569899 POTEMA6NI47 508 aa12.62□□□□□ -0.39
GDE1-205ENST00000569899 KRT27Q7Z3Y8 459 aa12.62□□□□□ -0.39
GDE1-205ENST00000569899 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
GDE1-205ENST00000569899 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
GDE1-205ENST00000569899 VPS9D1Q9Y2B5 631 aa12.62□□□□□ -0.39
GDE1-205ENST00000569899 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
GDE1-205ENST00000569899 PI4KAP2A4QPH2 592 aa12.62□□□□□ -0.39
GDE1-205ENST00000569899 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
GDE1-205ENST00000569899 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
GDE1-205ENST00000569899 PACS2Q86VP3 889 aa12.62□□□□□ -0.39
GDE1-205ENST00000569899 PI4KAP1Q8N8J0 262 aa12.62□□□□□ -0.39
GDE1-205ENST00000569899 PHOX2BQ99453 314 aa12.62□□□□□ -0.39
GDE1-205ENST00000569899 EP400Q96L91 3159 aa12.61□□□□□ -0.39
GDE1-205ENST00000569899 LOC102724428A0A0B4J2F2 783 aa12.61□□□□□ -0.39
GDE1-205ENST00000569899 OATP04181 439 aa12.61□□□□□ -0.39
GDE1-205ENST00000569899 CCT4P50991 539 aaKnown RBP12.61□□□□□ -0.39
GDE1-205ENST00000569899 SIK1P57059 783 aa12.61□□□□□ -0.39
GDE1-205ENST00000569899 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
GDE1-205ENST00000569899 METTL3Q86U44 580 aaKnown RBP12.61□□□□□ -0.39
GDE1-205ENST00000569899 DNAAF4Q8WXU2 420 aa12.61□□□□□ -0.39
GDE1-205ENST00000569899 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
GDE1-205ENST00000569899 ZBTB40Q9NUA8 1239 aa12.61□□□□□ -0.39
GDE1-205ENST00000569899 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
GDE1-205ENST00000569899 NUP98P52948 1817 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 ZBTB7BO15156 539 aaPredicted RBP12.6□□□□□ -0.39
GDE1-205ENST00000569899 CYP19A1P11511 503 aaPredicted RBP12.6□□□□□ -0.39
GDE1-205ENST00000569899 RXRBP28702 533 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 ITPK1Q13572 414 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 AAMPQ13685 434 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 NUDT18Q6ZVK8 323 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 COPS6Q7L5N1 327 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 PXYLP1Q8TE99 480 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 MEIS3Q99687 375 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 TEX13AQ9BXU3 409 aaPredicted RBP12.6□□□□□ -0.39
GDE1-205ENST00000569899 C1orf115Q9H7X2 142 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 MAP3K2Q9Y2U5 619 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 PCDHB15Q9Y5E8 787 aa12.6□□□□□ -0.39
GDE1-205ENST00000569899 STARD3NLO95772 234 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 DDX58O95786 925 aaKnown RBP12.59□□□□□ -0.39
GDE1-205ENST00000569899 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 KSR2Q6VAB6 950 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 TATDN2Q93075 761 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 PNMA3Q9UL41 463 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 ZBTB1Q9Y2K1 713 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 KDM2BQ8NHM5 1336 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 TTLL7Q6ZT98 887 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 KRTAP3-3Q9BYR6 98 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 KRTAP3-2Q9BYR7 98 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 RABGEF1Q9UJ41 708 aa12.59□□□□□ -0.39
GDE1-205ENST00000569899 C4BP0C0L5 1744 aa12.58□□□□□ -0.39
GDE1-205ENST00000569899 C4AP0C0L4 1744 aa12.58□□□□□ -0.4
GDE1-205ENST00000569899 SCN7AQ01118 1682 aa12.58□□□□□ -0.4
GDE1-205ENST00000569899 TK2O00142 265 aa12.58□□□□□ -0.4
GDE1-205ENST00000569899 SMAPO00193 183 aa12.58□□□□□ -0.4
GDE1-205ENST00000569899 PDE4DQ08499 809 aa12.58□□□□□ -0.4
GDE1-205ENST00000569899 BEND3Q5T5X7 828 aa12.58□□□□□ -0.4
GDE1-205ENST00000569899 FAM196AQ6ZSG2 479 aa12.58□□□□□ -0.4
GDE1-205ENST00000569899 RIC3Q7Z5B4 369 aa12.58□□□□□ -0.4
GDE1-205ENST00000569899 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
GDE1-205ENST00000569899 ZNF330Q9Y3S2 320 aaPredicted RBP12.58□□□□□ -0.4
GDE1-205ENST00000569899 KCNQ4P56696 695 aa12.57□□□□□ -0.4
GDE1-205ENST00000569899 AMHR2Q16671 573 aa12.57□□□□□ -0.4
GDE1-205ENST00000569899 SRCIN1Q9C0H9 1055 aa12.57□□□□□ -0.4
GDE1-205ENST00000569899 CHMP4BQ9H444 224 aaKnown RBP12.57□□□□□ -0.4
GDE1-205ENST00000569899 IGHDP01880 384 aa12.56□□□□□ -0.4
GDE1-205ENST00000569899 CRKLP46109 303 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms