RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.14	□□□□□ -0.63
SCAPER-223	ENST00000569784	ERBB4	Q15303	1308 aa		11.13	□□□□□ -0.63
SCAPER-223	ENST00000569784	EIF6	P56537	245 aa	Known RBP	11.13	□□□□□ -0.63
SCAPER-223	ENST00000569784	PARP10	Q53GL7	1025 aa		11.13	□□□□□ -0.63
SCAPER-223	ENST00000569784	SYNE4	Q8N205	404 aa		11.13	□□□□□ -0.63
SCAPER-223	ENST00000569784	NLRP3	Q96P20	1036 aa		11.13	□□□□□ -0.63
SCAPER-223	ENST00000569784	PPP1R37	O75864	691 aa		11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	SEC24B	O95487	1268 aa		11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	POTEJ	P0CG39	1038 aa		11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	LMOD1	P29536	600 aa	Predicted RBP	11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	IARS	P41252	1262 aa	Known RBP	11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	TMPO	P42166	694 aa	Known RBP	11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	HSP90AB3P	Q58FF7	597 aa		11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	SUSD4	Q5VX71	490 aa		11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	CC2D2B	Q6DHV5	1058 aa		11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	DNAJC5G	Q8N7S2	189 aa		11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	GJA3	Q9Y6H8	435 aa		11.12	□□□□□ -0.63
SCAPER-223	ENST00000569784	PPEF1	O14829	653 aa	Predicted RBP	11.11	□□□□□ -0.63
SCAPER-223	ENST00000569784	GRIPAP1	Q4V328	841 aa		11.11	□□□□□ -0.63
SCAPER-223	ENST00000569784	LARGE2	Q8N3Y3	721 aa		11.11	□□□□□ -0.63
SCAPER-223	ENST00000569784	RUNDC1	Q96C34	613 aa		11.11	□□□□□ -0.63
SCAPER-223	ENST00000569784	UTP14A	Q9BVJ6	771 aa	Known RBP	11.11	□□□□□ -0.63
SCAPER-223	ENST00000569784	BABAM1	Q9NWV8	329 aa		11.11	□□□□□ -0.63
SCAPER-223	ENST00000569784	HACL1	Q9UJ83	578 aa		11.11	□□□□□ -0.63
SCAPER-223	ENST00000569784	SCN4A	P35499	1836 aa		11.1	□□□□□ -0.63
SCAPER-223	ENST00000569784	ANXA1	P04083	346 aa		11.1	□□□□□ -0.63
SCAPER-223	ENST00000569784	OLFM4	Q6UX06	510 aa		11.1	□□□□□ -0.63
SCAPER-223	ENST00000569784	LDHD	Q86WU2	507 aa		11.1	□□□□□ -0.63
SCAPER-223	ENST00000569784	ABCC12	Q96J65	1359 aa		11.09	□□□□□ -0.63
SCAPER-223	ENST00000569784	KLRG2	A4D1S0	409 aa	Predicted RBP	11.09	□□□□□ -0.63
SCAPER-223	ENST00000569784	PLCG2	P16885	1265 aa		11.09	□□□□□ -0.63
SCAPER-223	ENST00000569784	COPS6	Q7L5N1	327 aa		11.09	□□□□□ -0.63
SCAPER-223	ENST00000569784	PNMA8A	Q86V59	439 aa	Predicted RBP	11.09	□□□□□ -0.63
SCAPER-223	ENST00000569784	NIM1K	Q8IY84	436 aa		11.09	□□□□□ -0.63
SCAPER-223	ENST00000569784	SUPT20H	Q8NEM7	779 aa		11.09	□□□□□ -0.63
SCAPER-223	ENST00000569784	MKRN1	Q9UHC7	482 aa	Known RBP	11.09	□□□□□ -0.63
SCAPER-223	ENST00000569784	TRMT112	Q9UI30	125 aa	Known RBP	11.09	□□□□□ -0.63
SCAPER-223	ENST00000569784	UBN2	Q6ZU65	1347 aa		11.09	□□□□□ -0.63
SCAPER-223	ENST00000569784	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	POTEC	B2RU33	542 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	PPIP5K2	O43314	1243 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	EPHX2	P34913	555 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	HDGFL1	Q5TGJ6	251 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	DDX46	Q7L014	1031 aa	Known RBP	11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	ZNF34	Q8IZ26	560 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	XAGE3	Q8WTP9	111 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	C7orf43	Q8WVR3	580 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	CRAMP1	Q96RY5	1269 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	PSMD1	Q99460	953 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	RNF123	Q5XPI4	1314 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	ZNF541	Q9H0D2	1346 aa		11.08	□□□□□ -0.64
SCAPER-223	ENST00000569784	NTSR2	O95665	410 aa		11.07	□□□□□ -0.64
SCAPER-223	ENST00000569784	CALD1	Q05682	793 aa	Known RBP	11.07	□□□□□ -0.64
SCAPER-223	ENST00000569784	CRY2	Q49AN0	593 aa		11.07	□□□□□ -0.64
SCAPER-223	ENST00000569784	GPC2	Q8N158	579 aa		11.07	□□□□□ -0.64
SCAPER-223	ENST00000569784	JMY	Q8N9B5	988 aa		11.07	□□□□□ -0.64
SCAPER-223	ENST00000569784	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.07	□□□□□ -0.64
SCAPER-223	ENST00000569784	ANKRD36C	Q5JPF3	1778 aa		11.07	□□□□□ -0.64
SCAPER-223	ENST00000569784	HSPA1A	P0DMV8	641 aa	Known RBP	11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	HSPA1B	P0DMV9	641 aa	Known RBP	11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	DPP8	Q6V1X1	898 aa	Predicted RBP	11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	ZNF428	Q96B54	188 aa		11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	AIDA	Q96BJ3	306 aa		11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	CHPF2	Q9P2E5	772 aa		11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	DBF4	Q9UBU7	674 aa	Predicted RBP	11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	ADAMTS8	Q9UP79	889 aa		11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	SH3TC1	Q8TE82	1336 aa		11.06	□□□□□ -0.64
SCAPER-223	ENST00000569784	TMEM88B	A6NKF7	163 aa		11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784		G3V3G9	751 aa		11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	FZD9	O00144	591 aa		11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	HCLS1	P14317	486 aa	Predicted RBP	11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	HOXA10	P31260	410 aa	Predicted RBP	11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	TCIRG1	Q13488	830 aa		11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	PROSER3	Q2NL68	480 aa		11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	RIC3	Q7Z5B4	369 aa		11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	TNS4	Q8IZW8	715 aa		11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	MPND	Q8N594	471 aa		11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	BCL2L13	Q9BXK5	485 aa		11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	ABT1	Q9ULW3	272 aa	Known RBP	11.05	□□□□□ -0.64
SCAPER-223	ENST00000569784	RIC1	Q4ADV7	1423 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	CHL1	O00533	1208 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	BBOX1	O75936	387 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	AOC3	Q16853	763 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	KRT24	Q2M2I5	525 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	ANKRD13D	Q6ZTN6	518 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	NLRP10	Q86W26	655 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	CNTROB	Q8N137	903 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	PLBD2	Q8NHP8	589 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	CFAP44	Q96MT7	982 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	CHMP4A	Q9BY43	222 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	HYPK	Q9NX55	129 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	ATP6V0A2	Q9Y487	856 aa		11.04	□□□□□ -0.64
SCAPER-223	ENST00000569784	ATP5J2-PTCD1	G3V325	749 aa		11.03	□□□□□ -0.64
SCAPER-223	ENST00000569784	HOXB7	P09629	217 aa		11.03	□□□□□ -0.64
SCAPER-223	ENST00000569784	HSP90B1	P14625	803 aa	Known RBP	11.03	□□□□□ -0.64

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