RNA–Protein interactions for RNA: ENST00000569711.1

LINC01654-201, Transcript of long intergenic non-protein coding RNA 1654, humanhuman

TSL 1 (best) BASIC

Gene LINC01654, Length 2,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01654-201ENST00000569711 XAGE3Q8WTP9 111 aa12.69□□□□□ -0.38
LINC01654-201ENST00000569711 DCAF5Q96JK2 942 aa12.69□□□□□ -0.38
LINC01654-201ENST00000569711 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
LINC01654-201ENST00000569711 KIF3AQ9Y496 699 aa12.69□□□□□ -0.38
LINC01654-201ENST00000569711 FPGT-TNNI3KV9GXZ4 949 aa12.69□□□□□ -0.38
LINC01654-201ENST00000569711 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
LINC01654-201ENST00000569711 TOB2Q14106 344 aaPredicted RBP12.69□□□□□ -0.38
LINC01654-201ENST00000569711 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
LINC01654-201ENST00000569711 RBM43Q6ZSC3 357 aaKnown RBP12.69□□□□□ -0.38
LINC01654-201ENST00000569711 MYRIPQ8NFW9 859 aa12.69□□□□□ -0.38
LINC01654-201ENST00000569711 ORAI2Q96SN7 254 aa12.69□□□□□ -0.38
LINC01654-201ENST00000569711 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
LINC01654-201ENST00000569711 ATL3Q6DD88 541 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 COPS6Q7L5N1 327 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 TTC6Q86TZ1 520 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 TTC5Q8N0Z6 440 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 NECAB1Q8N987 351 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 GTF3C6Q969F1 213 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 FMNL2Q96PY5 1086 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 NEK1Q96PY6 1258 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 MYD88Q99836 296 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 GPR108Q9NPR9 543 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 CFAP45Q9UL16 551 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 C1orf167Q5SNV9 1468 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 GTF2F1P35269 517 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01654-201ENST00000569711 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
LINC01654-201ENST00000569711 MCMDC2Q4G0Z9 681 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 CDC37L1Q7L3B6 337 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 SPATA32Q96LK8 384 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 HAUS7Q99871 368 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 TLR7Q9NYK1 1049 aaKnown RBP12.68□□□□□ -0.38
LINC01654-201ENST00000569711 TMEM94Q12767 1356 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 SH3TC1Q8TE82 1336 aa12.68□□□□□ -0.38
LINC01654-201ENST00000569711 PTPN12Q05209 780 aaKnown RBP12.67□□□□□ -0.38
LINC01654-201ENST00000569711 DNTTIP2Q5QJE6 756 aaKnown RBP12.67□□□□□ -0.38
LINC01654-201ENST00000569711 LRP10Q7Z4F1 713 aa12.67□□□□□ -0.38
LINC01654-201ENST00000569711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.67□□□□□ -0.38
LINC01654-201ENST00000569711 SIL1Q9H173 461 aa12.67□□□□□ -0.38
LINC01654-201ENST00000569711 PALLDQ8WX93 1383 aa12.67□□□□□ -0.38
LINC01654-201ENST00000569711 TNMDQ9H2S6 317 aa12.67□□□□□ -0.38
LINC01654-201ENST00000569711 PARP4Q9UKK3 1724 aaKnown RBP12.66□□□□□ -0.38
LINC01654-201ENST00000569711 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
LINC01654-201ENST00000569711 PLBD2Q8NHP8 589 aa12.66□□□□□ -0.38
LINC01654-201ENST00000569711 C19orf44Q9H6X5 657 aa12.66□□□□□ -0.38
LINC01654-201ENST00000569711 HELLSQ9NRZ9 838 aa12.66□□□□□ -0.38
LINC01654-201ENST00000569711 DBNLQ9UJU6 430 aaKnown RBP12.66□□□□□ -0.38
LINC01654-201ENST00000569711 TYRO3Q06418 890 aa12.66□□□□□ -0.38
LINC01654-201ENST00000569711 LMOD2Q6P5Q4 547 aa12.66□□□□□ -0.38
LINC01654-201ENST00000569711 ZNF589Q86UQ0 364 aaPredicted RBP12.66□□□□□ -0.38
LINC01654-201ENST00000569711 NFATC2IPQ8NCF5 419 aa12.66□□□□□ -0.38
LINC01654-201ENST00000569711 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
LINC01654-201ENST00000569711 CLSTN2Q9H4D0 955 aa12.66□□□□□ -0.38
LINC01654-201ENST00000569711 PKD1L3Q7Z443 1732 aa12.66□□□□□ -0.38
LINC01654-201ENST00000569711 DCCP43146 1447 aa12.65□□□□□ -0.38
LINC01654-201ENST00000569711 CTAGE5O15320 804 aa12.65□□□□□ -0.38
LINC01654-201ENST00000569711 MYL6BP14649 208 aa12.65□□□□□ -0.38
LINC01654-201ENST00000569711 NAA16Q6N069 864 aaPredicted RBP12.65□□□□□ -0.38
LINC01654-201ENST00000569711 KBTBD3Q8NAB2 608 aa12.65□□□□□ -0.38
LINC01654-201ENST00000569711 ADAMTSL3P82987 1691 aa12.65□□□□□ -0.38
LINC01654-201ENST00000569711 CHAF1AQ13111 956 aaPredicted RBP12.65□□□□□ -0.38
LINC01654-201ENST00000569711 EPHA10Q5JZY3 1008 aa12.65□□□□□ -0.38
LINC01654-201ENST00000569711 ZNF496Q96IT1 587 aaPredicted RBP12.65□□□□□ -0.38
LINC01654-201ENST00000569711 DSCC1Q9BVC3 393 aa12.65□□□□□ -0.38
LINC01654-201ENST00000569711 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.65□□□□□ -0.38
LINC01654-201ENST00000569711 SPEF2Q9C093 1822 aa12.65□□□□□ -0.38
LINC01654-201ENST00000569711 RGPD5Q99666 1765 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 ARFGEF2Q9Y6D5 1785 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 AFDNP55196 1824 aaKnown RBP12.64□□□□□ -0.39
LINC01654-201ENST00000569711 TFCP2Q12800 502 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 LRRFIP1Q32MZ4 808 aaKnown RBP12.64□□□□□ -0.39
LINC01654-201ENST00000569711 SMARCC2Q8TAQ2 1214 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 KIAA1524Q8TCG1 905 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 ATG3Q9NT62 314 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 NLRP2Q9NX02 1062 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 MRVI1Q9Y6F6 885 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 H3BQV1 296 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 PFKFB2O60825 505 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
LINC01654-201ENST00000569711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC01654-201ENST00000569711 ZNF609O15014 1411 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 COL18A1P39060 1754 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 CASP7P55210 303 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 RESTQ13127 1097 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
LINC01654-201ENST00000569711 FBXL16Q8N461 479 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 TTC12Q9H892 705 aaPredicted RBP12.63□□□□□ -0.39
LINC01654-201ENST00000569711 DACT1Q9NYF0 836 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 FAM13BQ9NYF5 915 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 MEGF6O75095 1541 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 A0A087WZG4 1122 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 LIG1P18858 919 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 Q6ZUG5 572 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 PROSER2Q86WR7 435 aaPredicted RBP12.63□□□□□ -0.39
LINC01654-201ENST00000569711 RGS22Q8NE09 1264 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 TDRD7Q8NHU6 1098 aaKnown RBP12.63□□□□□ -0.39
LINC01654-201ENST00000569711 RBM33Q96EV2 1170 aaKnown RBP12.63□□□□□ -0.39
LINC01654-201ENST00000569711 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
LINC01654-201ENST00000569711 HSP90B1P14625 803 aaKnown RBP12.62□□□□□ -0.39
LINC01654-201ENST00000569711 CDC25BP30305 580 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms